RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 CCNB3Q8WWL7 1395 aa24.26■■□□□ 1.47
KDM2A-202ENST00000398645 DDX49Q9Y6V7 483 aaKnown RBP24.26■■□□□ 1.47
KDM2A-202ENST00000398645 NGEFQ8N5V2 710 aa24.26■■□□□ 1.47
KDM2A-202ENST00000398645 KDM4AO75164 1064 aa24.25■■□□□ 1.47
KDM2A-202ENST00000398645 CEP89Q96ST8 783 aa24.25■■□□□ 1.47
KDM2A-202ENST00000398645 FRAT2O75474 233 aaPredicted RBP24.25■■□□□ 1.47
KDM2A-202ENST00000398645 NECTIN2Q92692 538 aa24.24■■□□□ 1.47
KDM2A-202ENST00000398645 STK31Q9BXU1 1019 aa24.24■■□□□ 1.47
KDM2A-202ENST00000398645 ANKRD45Q5TZF3 282 aa24.22■■□□□ 1.47
KDM2A-202ENST00000398645 PCMTD1Q96MG8 357 aaPredicted RBP24.2■■□□□ 1.47
KDM2A-202ENST00000398645 CFAP44Q96MT7 982 aa24.2■■□□□ 1.46
KDM2A-202ENST00000398645 CENPJQ9HC77 1338 aaPredicted RBP24.19■■□□□ 1.46
KDM2A-202ENST00000398645 CSPP1Q1MSJ5 1256 aa24.19■■□□□ 1.46
KDM2A-202ENST00000398645 ST18O60284 1047 aa24.18■■□□□ 1.46
KDM2A-202ENST00000398645 EXOC6Q8TAG9 804 aa24.18■■□□□ 1.46
KDM2A-202ENST00000398645 KANK1Q14678 1352 aa24.18■■□□□ 1.46
KDM2A-202ENST00000398645 GSE1Q14687 1217 aa24.18■■□□□ 1.46
KDM2A-202ENST00000398645 GOLGA6L19H0YKK7 550 aa24.18■■□□□ 1.46
KDM2A-202ENST00000398645 DHX37Q8IY37 1157 aaKnown RBP24.17■■□□□ 1.46
KDM2A-202ENST00000398645 CRBNQ96SW2 442 aa24.17■■□□□ 1.46
KDM2A-202ENST00000398645 PHF14O94880 888 aa24.17■■□□□ 1.46
KDM2A-202ENST00000398645 FAM184AQ8NB25 1140 aa24.16■■□□□ 1.46
KDM2A-202ENST00000398645 SPAG9O60271 1321 aaKnown RBP24.15■■□□□ 1.46
KDM2A-202ENST00000398645 SKIDA1Q1XH10 827 aa24.14■■□□□ 1.46
KDM2A-202ENST00000398645 RSPH6AQ9H0K4 717 aa24.14■■□□□ 1.46
KDM2A-202ENST00000398645 PDE4AP27815 886 aa24.13■■□□□ 1.45
KDM2A-202ENST00000398645 BECN2A8MW95 431 aa24.13■■□□□ 1.45
KDM2A-202ENST00000398645 DDX11L8A8MPP1 907 aa24.12■■□□□ 1.45
KDM2A-202ENST00000398645 KANK4Q5T7N3 995 aaPredicted RBP24.12■■□□□ 1.45
KDM2A-202ENST00000398645 TMX4Q9H1E5 349 aaPredicted RBP24.12■■□□□ 1.45
KDM2A-202ENST00000398645 SAMD1Q6SPF0 538 aaPredicted RBP24.1■■□□□ 1.45
KDM2A-202ENST00000398645 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
KDM2A-202ENST00000398645 HMMRO75330 724 aa24.08■■□□□ 1.45
KDM2A-202ENST00000398645 TSR1Q2NL82 804 aaKnown RBP24.08■■□□□ 1.45
KDM2A-202ENST00000398645 HOMER1Q86YM7 354 aa24.07■■□□□ 1.44
KDM2A-202ENST00000398645 COG6Q9Y2V7 657 aa24.07■■□□□ 1.44
KDM2A-202ENST00000398645 ANO2Q9NQ90 1003 aa24.06■■□□□ 1.44
KDM2A-202ENST00000398645 WRNQ14191 1432 aaPredicted RBP eCLIP24.06■■□□□ 1.44
KDM2A-202ENST00000398645 TTLL5Q6EMB2 1281 aa24.05■■□□□ 1.44
KDM2A-202ENST00000398645 RALBP1Q15311 655 aa24.05■■□□□ 1.44
KDM2A-202ENST00000398645 CCDC34Q96HJ3 373 aa24.04■■□□□ 1.44
KDM2A-202ENST00000398645 TNIKQ9UKE5 1360 aa24.04■■□□□ 1.44
KDM2A-202ENST00000398645 GTF2E1P29083 439 aaPredicted RBP24.03■■□□□ 1.44
KDM2A-202ENST00000398645 AMPHP49418 695 aa24.03■■□□□ 1.44
KDM2A-202ENST00000398645 EIF2S2P20042 333 aaKnown RBP24.03■■□□□ 1.44
KDM2A-202ENST00000398645 MPHOSPH9Q99550 1183 aa24.03■■□□□ 1.44
KDM2A-202ENST00000398645 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
KDM2A-202ENST00000398645 FAM161AQ3B820 660 aa24.01■■□□□ 1.43
KDM2A-202ENST00000398645 CALRP27797 417 aaKnown RBP24.01■■□□□ 1.43
KDM2A-202ENST00000398645 NAP1L1P55209 391 aaKnown RBP24.01■■□□□ 1.43
KDM2A-202ENST00000398645 EEA1Q15075 1411 aa24■■□□□ 1.43
KDM2A-202ENST00000398645 RAB3GAP2Q9H2M9 1393 aa24■■□□□ 1.43
KDM2A-202ENST00000398645 KIF27Q86VH2 1401 aa23.99■■□□□ 1.43
KDM2A-202ENST00000398645 TRAK1Q9UPV9 953 aa23.99■■□□□ 1.43
KDM2A-202ENST00000398645 AKAP17AQ02040 695 aaKnown RBP23.98■■□□□ 1.43
KDM2A-202ENST00000398645 ZNF428Q96B54 188 aa23.98■■□□□ 1.43
KDM2A-202ENST00000398645 BICD2Q8TD16 824 aa23.98■■□□□ 1.43
KDM2A-202ENST00000398645 MTMR7Q9Y216 660 aa23.98■■□□□ 1.43
KDM2A-202ENST00000398645 R3HCC1Q9Y3T6 440 aaKnown RBP23.98■■□□□ 1.43
KDM2A-202ENST00000398645 APPP05067 770 aa23.98■■□□□ 1.43
KDM2A-202ENST00000398645 NGDNQ8NEJ9 315 aaKnown RBP23.98■■□□□ 1.43
KDM2A-202ENST00000398645 MSH5O43196 834 aa23.97■■□□□ 1.43
KDM2A-202ENST00000398645 TPM2P07951 284 aa23.97■■□□□ 1.43
KDM2A-202ENST00000398645 RBM10P98175 930 aaKnown RBP23.96■■□□□ 1.43
KDM2A-202ENST00000398645 ARHGAP35Q9NRY4 1499 aa23.96■■□□□ 1.43
KDM2A-202ENST00000398645 IFT57Q9NWB7 429 aa23.95■■□□□ 1.43
KDM2A-202ENST00000398645 VPS37CA5D8V6 355 aaPredicted RBP23.95■■□□□ 1.42
KDM2A-202ENST00000398645 DHX16O60231 1041 aaKnown RBP23.95■■□□□ 1.42
KDM2A-202ENST00000398645 MAPK8IP2Q13387 824 aaPredicted RBP23.94■■□□□ 1.42
KDM2A-202ENST00000398645 TPM1P09493 284 aa23.94■■□□□ 1.42
KDM2A-202ENST00000398645 NUP155O75694 1391 aa23.94■■□□□ 1.42
KDM2A-202ENST00000398645 FYB1O15117 783 aa23.93■■□□□ 1.42
KDM2A-202ENST00000398645 CCDC70Q6NSX1 233 aa23.93■■□□□ 1.42
KDM2A-202ENST00000398645 SOGA1O94964 1423 aa23.93■■□□□ 1.42
KDM2A-202ENST00000398645 TCEAL9Q9UHQ7 104 aa23.93■■□□□ 1.42
KDM2A-202ENST00000398645 GPS2Q13227 327 aa23.93■■□□□ 1.42
KDM2A-202ENST00000398645 DIAPH3Q9NSV4 1193 aa23.92■■□□□ 1.42
KDM2A-202ENST00000398645 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
KDM2A-202ENST00000398645 MPNDQ8N594 471 aa23.92■■□□□ 1.42
KDM2A-202ENST00000398645 PANK3Q9H999 370 aa23.92■■□□□ 1.42
KDM2A-202ENST00000398645 RNF214Q8ND24 703 aa23.92■■□□□ 1.42
KDM2A-202ENST00000398645 PLCD4Q9BRC7 762 aa23.91■■□□□ 1.42
KDM2A-202ENST00000398645 RRP1P56182 461 aaKnown RBP23.91■■□□□ 1.42
KDM2A-202ENST00000398645 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.421e-6■■■■■ 28.1
KDM2A-202ENST00000398645 PDILTQ8N807 584 aa23.91■■□□□ 1.42
KDM2A-202ENST00000398645 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
KDM2A-202ENST00000398645 CENPQQ7L2Z9 268 aaPredicted RBP23.9■■□□□ 1.42
KDM2A-202ENST00000398645 CCDC27Q2M243 656 aa23.9■■□□□ 1.42
KDM2A-202ENST00000398645 L3MBTL2Q969R5 705 aa23.89■■□□□ 1.42
KDM2A-202ENST00000398645 RRP12Q5JTH9 1297 aaKnown RBP23.88■■□□□ 1.41
KDM2A-202ENST00000398645 TEX35Q5T0J7 233 aa23.88■■□□□ 1.41
KDM2A-202ENST00000398645 NFXL1Q6ZNB6 911 aa23.88■■□□□ 1.41
KDM2A-202ENST00000398645 TRIM29Q14134 588 aa23.86■■□□□ 1.41
KDM2A-202ENST00000398645 CNKSR2Q8WXI2 1034 aa23.86■■□□□ 1.41
KDM2A-202ENST00000398645 USP35Q9P2H5 1018 aa23.86■■□□□ 1.41
KDM2A-202ENST00000398645 SYNE3Q6ZMZ3 975 aa23.85■■□□□ 1.41
KDM2A-202ENST00000398645 STK11IPQ8N1F8 1099 aa23.84■■□□□ 1.41
KDM2A-202ENST00000398645 RUFY1Q96T51 708 aa23.84■■□□□ 1.41
KDM2A-202ENST00000398645 SKOR2Q2VWA4 1001 aaPredicted RBP23.83■■□□□ 1.41
KDM2A-202ENST00000398645 FAM43AQ8N2R8 423 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms