RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 PNISRQ8TF01 805 aaKnown RBP20.6■□□□□ 0.89
CFAP53-201ENST00000398545 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
CFAP53-201ENST00000398545 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
CFAP53-201ENST00000398545 CARD11Q9BXL7 1154 aa20.6■□□□□ 0.89
CFAP53-201ENST00000398545 ZNF326Q5BKZ1 582 aaKnown RBP20.59■□□□□ 0.89
CFAP53-201ENST00000398545 RALBP1Q15311 655 aa20.58■□□□□ 0.89
CFAP53-201ENST00000398545 MYO5CQ9NQX4 1742 aa20.58■□□□□ 0.89
CFAP53-201ENST00000398545 EIF2AK4Q9P2K8 1649 aaKnown RBP20.58■□□□□ 0.88
CFAP53-201ENST00000398545 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
CFAP53-201ENST00000398545 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
CFAP53-201ENST00000398545 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
CFAP53-201ENST00000398545 ZMYM4Q5VZL5 1548 aa20.56■□□□□ 0.88
CFAP53-201ENST00000398545 IQGAP3Q86VI3 1631 aa20.56■□□□□ 0.88
CFAP53-201ENST00000398545 TMC1Q8TDI8 760 aa20.56■□□□□ 0.88
CFAP53-201ENST00000398545 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
CFAP53-201ENST00000398545 PRDM15P57071 1507 aaPredicted RBP20.52■□□□□ 0.88
CFAP53-201ENST00000398545 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
CFAP53-201ENST00000398545 INSRP06213 1382 aa20.52■□□□□ 0.88
CFAP53-201ENST00000398545 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.88
CFAP53-201ENST00000398545 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
CFAP53-201ENST00000398545 ST20-MTHFSA0A0A6YYL1 179 aa20.5■□□□□ 0.87
CFAP53-201ENST00000398545 PARD3Q8TEW0 1356 aa20.49■□□□□ 0.87
CFAP53-201ENST00000398545 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
CFAP53-201ENST00000398545 COL17A1Q9UMD9 1497 aaPredicted RBP20.48■□□□□ 0.87
CFAP53-201ENST00000398545 RNF17Q9BXT8 1623 aaKnown RBP20.48■□□□□ 0.87
CFAP53-201ENST00000398545 PLEKHH2Q8IVE3 1493 aa20.47■□□□□ 0.87
CFAP53-201ENST00000398545 FBLN2P98095 1184 aa20.47■□□□□ 0.87
CFAP53-201ENST00000398545 DCAF11Q8TEB1 546 aa20.47■□□□□ 0.87
CFAP53-201ENST00000398545 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
CFAP53-201ENST00000398545 ATP10AO60312 1499 aa20.46■□□□□ 0.87
CFAP53-201ENST00000398545 MAGI2Q86UL8 1455 aa20.46■□□□□ 0.87
CFAP53-201ENST00000398545 WASHC2CQ9Y4E1 1318 aa20.46■□□□□ 0.87
CFAP53-201ENST00000398545 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
CFAP53-201ENST00000398545 TTC37Q6PGP7 1564 aa20.46■□□□□ 0.87
CFAP53-201ENST00000398545 PDE3BQ13370 1112 aa20.45■□□□□ 0.86
CFAP53-201ENST00000398545 BCL11AQ9H165 835 aa20.45■□□□□ 0.86
CFAP53-201ENST00000398545 NLRP13Q86W25 1043 aa20.45■□□□□ 0.86
CFAP53-201ENST00000398545 A2MP01023 1474 aa20.44■□□□□ 0.86
CFAP53-201ENST00000398545 HNRNPMP52272 730 aaKnown RBP eCLIP20.43■□□□□ 0.86
CFAP53-201ENST00000398545 CHD1O14646 1710 aa20.42■□□□□ 0.86
CFAP53-201ENST00000398545 ARHGAP5Q13017 1502 aa20.42■□□□□ 0.86
CFAP53-201ENST00000398545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.42■□□□□ 0.86
CFAP53-201ENST00000398545 DUOX2Q9NRD8 1548 aa20.42■□□□□ 0.86
CFAP53-201ENST00000398545 KDM2AQ9Y2K7 1162 aa20.41■□□□□ 0.86
CFAP53-201ENST00000398545 NOP58Q9Y2X3 529 aaKnown RBP20.41■□□□□ 0.86
CFAP53-201ENST00000398545 PLA2R1Q13018 1463 aa20.4■□□□□ 0.86
CFAP53-201ENST00000398545 ERBINQ96RT1 1412 aa20.38■□□□□ 0.85
CFAP53-201ENST00000398545 RRP1P56182 461 aaKnown RBP20.38■□□□□ 0.85
CFAP53-201ENST00000398545 BLMP54132 1417 aaPredicted RBP20.38■□□□□ 0.85
CFAP53-201ENST00000398545 ANP32AP39687 249 aaKnown RBP20.36■□□□□ 0.85
CFAP53-201ENST00000398545 CNGB1Q14028 1251 aaPredicted RBP20.36■□□□□ 0.85
CFAP53-201ENST00000398545 IQGAP1P46940 1657 aa20.36■□□□□ 0.85
CFAP53-201ENST00000398545 PER1O15534 1290 aaPredicted RBP20.35■□□□□ 0.85
CFAP53-201ENST00000398545 ABCC2Q92887 1545 aa20.35■□□□□ 0.85
CFAP53-201ENST00000398545 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.85
CFAP53-201ENST00000398545 CEP152O94986 1710 aa20.33■□□□□ 0.85
CFAP53-201ENST00000398545 SPHKAPQ2M3C7 1700 aa20.33■□□□□ 0.85
CFAP53-201ENST00000398545 IPO9Q96P70 1041 aaKnown RBP20.31■□□□□ 0.84
CFAP53-201ENST00000398545 MADDQ8WXG6 1647 aa20.31■□□□□ 0.84
CFAP53-201ENST00000398545 TESK2Q96S53 571 aa20.29■□□□□ 0.84
CFAP53-201ENST00000398545 DISP3Q9P2K9 1392 aa20.28■□□□□ 0.84
CFAP53-201ENST00000398545 TCERG1O14776 1098 aaKnown RBP20.28■□□□□ 0.84
CFAP53-201ENST00000398545 SYNMO15061 1565 aa20.27■□□□□ 0.84
CFAP53-201ENST00000398545 ABCC1P33527 1531 aa20.27■□□□□ 0.84
CFAP53-201ENST00000398545 KIAA1210Q9ULL0 1709 aa20.27■□□□□ 0.83
CFAP53-201ENST00000398545 TMF1P82094 1093 aa20.26■□□□□ 0.83
CFAP53-201ENST00000398545 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
CFAP53-201ENST00000398545 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
CFAP53-201ENST00000398545 TRPM2O94759 1503 aa20.25■□□□□ 0.83
CFAP53-201ENST00000398545 MS4A1P11836 297 aa20.24■□□□□ 0.83
CFAP53-201ENST00000398545 CLASP1Q7Z460 1538 aa20.24■□□□□ 0.83
CFAP53-201ENST00000398545 ZCCHC11Q5TAX3 1644 aaKnown RBP20.23■□□□□ 0.83
CFAP53-201ENST00000398545 NEURL4Q96JN8 1562 aa20.23■□□□□ 0.83
CFAP53-201ENST00000398545 ARAP3Q8WWN8 1544 aa20.23■□□□□ 0.83
CFAP53-201ENST00000398545 EXOC6Q8TAG9 804 aa20.22■□□□□ 0.83
CFAP53-201ENST00000398545 PLCH2O75038 1416 aa20.22■□□□□ 0.83
CFAP53-201ENST00000398545 RGL3Q3MIN7 710 aa20.22■□□□□ 0.83
CFAP53-201ENST00000398545 STAC3Q96MF2 364 aa20.22■□□□□ 0.83
CFAP53-201ENST00000398545 PAK3O75914 559 aaPredicted RBP20.2■□□□□ 0.82
CFAP53-201ENST00000398545 ZBTB47Q9UFB7 747 aaPredicted RBP20.2■□□□□ 0.82
CFAP53-201ENST00000398545 TET3O43151 1660 aa20.2■□□□□ 0.82
CFAP53-201ENST00000398545 MYOM1P52179 1685 aa20.2■□□□□ 0.82
CFAP53-201ENST00000398545 WDR7Q9Y4E6 1490 aa20.2■□□□□ 0.82
CFAP53-201ENST00000398545 SCAPERQ9BY12 1400 aa20.19■□□□□ 0.82
CFAP53-201ENST00000398545 UHRF1BP1LA0JNW5 1464 aa20.19■□□□□ 0.82
CFAP53-201ENST00000398545 PANK3Q9H999 370 aa20.18■□□□□ 0.82
CFAP53-201ENST00000398545 RTEL1-TNFRSF6BF6WH68 1400 aa20.17■□□□□ 0.82
CFAP53-201ENST00000398545 DEKP35659 375 aaKnown RBP20.17■□□□□ 0.82
CFAP53-201ENST00000398545 KDM5AP29375 1690 aaKnown RBP20.17■□□□□ 0.82
CFAP53-201ENST00000398545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.82
CFAP53-201ENST00000398545 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
CFAP53-201ENST00000398545 SCAF11Q99590 1463 aaKnown RBP20.15■□□□□ 0.82
CFAP53-201ENST00000398545 ZFYVE16Q7Z3T8 1539 aa20.15■□□□□ 0.82
CFAP53-201ENST00000398545 SENP3-EIF4A1A0A087X0R7 540 aa20.15■□□□□ 0.82
CFAP53-201ENST00000398545 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
CFAP53-201ENST00000398545 PTPRTO14522 1441 aa20.14■□□□□ 0.81
CFAP53-201ENST00000398545 ASXL1Q8IXJ9 1541 aa20.14■□□□□ 0.81
CFAP53-201ENST00000398545 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
CFAP53-201ENST00000398545 NPC1L1Q9UHC9 1359 aa20.13■□□□□ 0.81
CFAP53-201ENST00000398545 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms