RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 CCDC184Q52MB2 194 aa15.75■□□□□ 0.11
SOCS6-201ENST00000397942 COG6Q9Y2V7 657 aa15.75■□□□□ 0.11
SOCS6-201ENST00000397942 CENPQQ7L2Z9 268 aaPredicted RBP15.74■□□□□ 0.11
SOCS6-201ENST00000397942 GZF1Q9H116 711 aaPredicted RBP15.74■□□□□ 0.11
SOCS6-201ENST00000397942 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.11
SOCS6-201ENST00000397942 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
SOCS6-201ENST00000397942 CALD1Q05682 793 aaKnown RBP15.72■□□□□ 0.11
SOCS6-201ENST00000397942 E9PSI1 815 aa15.72■□□□□ 0.11
SOCS6-201ENST00000397942 NAP1L5Q96NT1 182 aaPredicted RBP15.72■□□□□ 0.11
SOCS6-201ENST00000397942 MFAP1P55081 439 aaKnown RBP15.72■□□□□ 0.11
SOCS6-201ENST00000397942 CGNL1Q0VF96 1302 aa15.72■□□□□ 0.11
SOCS6-201ENST00000397942 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
SOCS6-201ENST00000397942 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
SOCS6-201ENST00000397942 PLCB2Q00722 1185 aa15.71■□□□□ 0.11
SOCS6-201ENST00000397942 FAM161AQ3B820 660 aa15.71■□□□□ 0.11
SOCS6-201ENST00000397942 ELL2O00472 640 aaPredicted RBP15.7■□□□□ 0.1
SOCS6-201ENST00000397942 KCNJ4P48050 445 aa15.7■□□□□ 0.1
SOCS6-201ENST00000397942 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
SOCS6-201ENST00000397942 CDCA7LQ96GN5 454 aa15.7■□□□□ 0.1
SOCS6-201ENST00000397942 USP35Q9P2H5 1018 aa15.7■□□□□ 0.1
SOCS6-201ENST00000397942 DNTTIP2Q5QJE6 756 aaKnown RBP15.69■□□□□ 0.1
SOCS6-201ENST00000397942 NBPF1Q3BBV0 1214 aa15.69■□□□□ 0.1
SOCS6-201ENST00000397942 HFM1A2PYH4 1435 aa15.69■□□□□ 0.1
SOCS6-201ENST00000397942 PNISRQ8TF01 805 aaKnown RBP15.69■□□□□ 0.1
SOCS6-201ENST00000397942 ADAMTS8Q9UP79 889 aa15.68■□□□□ 0.1
SOCS6-201ENST00000397942 VGFO15240 615 aaPredicted RBP15.68■□□□□ 0.1
SOCS6-201ENST00000397942 NGEFQ8N5V2 710 aa15.67■□□□□ 0.1
SOCS6-201ENST00000397942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.67■□□□□ 0.1
SOCS6-201ENST00000397942 FYCO1Q9BQS8 1478 aa15.67■□□□□ 0.1
SOCS6-201ENST00000397942 AFAP1Q8N556 730 aa15.66■□□□□ 0.1
SOCS6-201ENST00000397942 FGD1P98174 961 aa15.66■□□□□ 0.1
SOCS6-201ENST00000397942 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
SOCS6-201ENST00000397942 NUTM2FA1L443 756 aa15.65■□□□□ 0.1
SOCS6-201ENST00000397942 STAC3Q96MF2 364 aa15.65■□□□□ 0.1
SOCS6-201ENST00000397942 GBP4Q96PP9 640 aa15.65■□□□□ 0.1
SOCS6-201ENST00000397942 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
SOCS6-201ENST00000397942 BRD4O60885 1362 aaPredicted RBP15.63■□□□□ 0.09
SOCS6-201ENST00000397942 CUX1P39880 1505 aa15.63■□□□□ 0.09
SOCS6-201ENST00000397942 ZRSR1Q15695 479 aaKnown RBP15.63■□□□□ 0.09
SOCS6-201ENST00000397942 NAIPQ13075 1403 aa15.62■□□□□ 0.09
SOCS6-201ENST00000397942 MCCP23508 829 aa15.61■□□□□ 0.09
SOCS6-201ENST00000397942 STK31Q9BXU1 1019 aa15.61■□□□□ 0.09
SOCS6-201ENST00000397942 EVC2Q86UK5 1308 aa15.61■□□□□ 0.09
SOCS6-201ENST00000397942 C11orf95C9JLR9 678 aaPredicted RBP15.61■□□□□ 0.09
SOCS6-201ENST00000397942 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
SOCS6-201ENST00000397942 CFAP70Q5T0N1 1121 aa15.61■□□□□ 0.09
SOCS6-201ENST00000397942 SLC4A10Q6U841 1118 aa15.6■□□□□ 0.09
SOCS6-201ENST00000397942 MINK1Q8N4C8 1332 aaPredicted RBP15.6■□□□□ 0.09
SOCS6-201ENST00000397942 MIA2Q96PC5 1412 aa15.6■□□□□ 0.09
SOCS6-201ENST00000397942 WDR97A6NE52 1622 aa15.6■□□□□ 0.09
SOCS6-201ENST00000397942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.6■□□□□ 0.09
SOCS6-201ENST00000397942 PAK3O75914 559 aaPredicted RBP15.6■□□□□ 0.09
SOCS6-201ENST00000397942 NESP48681 1621 aa15.59■□□□□ 0.09
SOCS6-201ENST00000397942 GOLGA6L4A6NEF3 574 aa15.59■□□□□ 0.09
SOCS6-201ENST00000397942 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.08
SOCS6-201ENST00000397942 HMMRO75330 724 aa15.57■□□□□ 0.08
SOCS6-201ENST00000397942 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
SOCS6-201ENST00000397942 GSE1Q14687 1217 aa15.57■□□□□ 0.08
SOCS6-201ENST00000397942 KIAA1211Q6ZU35 1233 aa15.57■□□□□ 0.08
SOCS6-201ENST00000397942 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
SOCS6-201ENST00000397942 ANKRD45Q5TZF3 282 aa15.56■□□□□ 0.08
SOCS6-201ENST00000397942 NGDNQ8NEJ9 315 aaKnown RBP15.56■□□□□ 0.08
SOCS6-201ENST00000397942 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
SOCS6-201ENST00000397942 GOLGA6L3A6NEY3 463 aa15.56■□□□□ 0.08
SOCS6-201ENST00000397942 TIAM1Q13009 1591 aa15.56■□□□□ 0.08
SOCS6-201ENST00000397942 DZIP1LQ8IYY4 767 aaKnown RBP15.55■□□□□ 0.08
SOCS6-201ENST00000397942 TAOK2Q9UL54 1235 aa15.55■□□□□ 0.08
SOCS6-201ENST00000397942 MTHFSP49914 203 aa15.55■□□□□ 0.08
SOCS6-201ENST00000397942 TCP11L2Q8N4U5 519 aa15.55■□□□□ 0.08
SOCS6-201ENST00000397942 PANK1Q8TE04 598 aa15.55■□□□□ 0.08
SOCS6-201ENST00000397942 AKNAQ7Z591 1439 aa15.55■□□□□ 0.08
SOCS6-201ENST00000397942 RUNDC1Q96C34 613 aa15.54■□□□□ 0.08
SOCS6-201ENST00000397942 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
SOCS6-201ENST00000397942 MSNP26038 577 aaKnown RBP15.54■□□□□ 0.08
SOCS6-201ENST00000397942 PRG4Q92954 1404 aaPredicted RBP15.54■□□□□ 0.08
SOCS6-201ENST00000397942 PPP2R1AP30153 589 aa15.54■□□□□ 0.08
SOCS6-201ENST00000397942 GRIN2BQ13224 1484 aa15.54■□□□□ 0.08
SOCS6-201ENST00000397942 KIAA1107Q9UPP5 1409 aa15.53■□□□□ 0.08
SOCS6-201ENST00000397942 RIPK4P57078 832 aa15.53■□□□□ 0.08
SOCS6-201ENST00000397942 GGNBP2Q9H3C7 697 aa15.53■□□□□ 0.08
SOCS6-201ENST00000397942 DDX19BQ9UMR2 479 aa15.53■□□□□ 0.08
SOCS6-201ENST00000397942 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
SOCS6-201ENST00000397942 DIAPH1O60610 1272 aaKnown RBP15.53■□□□□ 0.08
SOCS6-201ENST00000397942 AMPHP49418 695 aa15.53■□□□□ 0.08
SOCS6-201ENST00000397942 CHMP4AQ9BY43 222 aa15.52■□□□□ 0.07
SOCS6-201ENST00000397942 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.07
SOCS6-201ENST00000397942 LTV1Q96GA3 475 aaPredicted RBP15.51■□□□□ 0.07
SOCS6-201ENST00000397942 SLC12A5Q9H2X9 1139 aa15.51■□□□□ 0.07
SOCS6-201ENST00000397942 TROQ12816 1431 aaPredicted RBP15.5■□□□□ 0.07
SOCS6-201ENST00000397942 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
SOCS6-201ENST00000397942 COG3Q96JB2 828 aa15.49■□□□□ 0.07
SOCS6-201ENST00000397942 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
SOCS6-201ENST00000397942 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.49■□□□□ 0.07
SOCS6-201ENST00000397942 EFCAB5A4FU69 1503 aa15.49■□□□□ 0.07
SOCS6-201ENST00000397942 LNPKQ9C0E8 428 aa15.49■□□□□ 0.07
SOCS6-201ENST00000397942 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
SOCS6-201ENST00000397942 NFKBIBQ15653 356 aa15.47■□□□□ 0.07
SOCS6-201ENST00000397942 ANKRD30BQ9BXX2 1392 aa15.47■□□□□ 0.07
SOCS6-201ENST00000397942 BACH2Q9BYV9 841 aa15.47■□□□□ 0.07
SOCS6-201ENST00000397942 NOL8Q76FK4 1167 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms