RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DHX29Q7Z478 1369 aaKnown RBP8.25□□□□□ -1.09
PTPRD-206ENST00000397617 FANCAO15360 1455 aa8.25□□□□□ -1.09
PTPRD-206ENST00000397617 KIAA1210Q9ULL0 1709 aa8.25□□□□□ -1.09
PTPRD-206ENST00000397617 PUS7Q96PZ0 661 aaKnown RBP8.25□□□□□ -1.09
PTPRD-206ENST00000397617 SYCP2Q9BX26 1530 aa8.25□□□□□ -1.09
PTPRD-206ENST00000397617 CCDC144AA2RUR9 1427 aa8.24□□□□□ -1.09
PTPRD-206ENST00000397617 AGLP35573 1532 aa8.24□□□□□ -1.09
PTPRD-206ENST00000397617 ATP7AQ04656 1500 aa8.24□□□□□ -1.09
PTPRD-206ENST00000397617 SPAG9O60271 1321 aaKnown RBP8.24□□□□□ -1.09
PTPRD-206ENST00000397617 ASXL2Q76L83 1435 aa8.23□□□□□ -1.09
PTPRD-206ENST00000397617 CNTLNQ9NXG0 1405 aa8.23□□□□□ -1.09
PTPRD-206ENST00000397617 POGZQ7Z3K3 1410 aa8.23□□□□□ -1.09
PTPRD-206ENST00000397617 TRPM2O94759 1503 aa8.22□□□□□ -1.09
PTPRD-206ENST00000397617 ADGRL1O94910 1474 aa8.22□□□□□ -1.09
PTPRD-206ENST00000397617 ZFYVE9O95405 1425 aa8.22□□□□□ -1.09
PTPRD-206ENST00000397617 CDCA8Q53HL2 280 aa8.21□□□□□ -1.09
PTPRD-206ENST00000397617 RPGRIP1LQ68CZ1 1315 aa8.21□□□□□ -1.09
PTPRD-206ENST00000397617 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.1
PTPRD-206ENST00000397617 NGEFQ8N5V2 710 aa8.21□□□□□ -1.1
PTPRD-206ENST00000397617 NPC1L1Q9UHC9 1359 aa8.21□□□□□ -1.1
PTPRD-206ENST00000397617 ERICH6BQ5W0A0 696 aa8.2□□□□□ -1.1
PTPRD-206ENST00000397617 MYOM2P54296 1465 aa8.2□□□□□ -1.1
PTPRD-206ENST00000397617 EFCAB6Q5THR3 1501 aa8.2□□□□□ -1.1
PTPRD-206ENST00000397617 ITGAEP38570 1179 aa8.19□□□□□ -1.1
PTPRD-206ENST00000397617 ERCC6L2Q5T890 1561 aa8.18□□□□□ -1.1
PTPRD-206ENST00000397617 L3MBTL2Q969R5 705 aa8.18□□□□□ -1.1
PTPRD-206ENST00000397617 RRP7BPQ9NSQ0 103 aa8.18□□□□□ -1.1
PTPRD-206ENST00000397617 CD109Q6YHK3 1445 aa8.18□□□□□ -1.1
PTPRD-206ENST00000397617 HECW2Q9P2P5 1572 aa8.18□□□□□ -1.1
PTPRD-206ENST00000397617 A2MP01023 1474 aa8.18□□□□□ -1.1
PTPRD-206ENST00000397617 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
PTPRD-206ENST00000397617 PKD2Q13563 968 aa8.17□□□□□ -1.1
PTPRD-206ENST00000397617 ZNF644Q9H582 1327 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-206ENST00000397617 SLC52A1Q9NWF4 448 aa8.17□□□□□ -1.1
PTPRD-206ENST00000397617 TTBK1Q5TCY1 1321 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-206ENST00000397617 PRAG1Q86YV5 1406 aa8.16□□□□□ -1.1
PTPRD-206ENST00000397617 EIF3AQ14152 1382 aaKnown RBP8.15□□□□□ -1.1
PTPRD-206ENST00000397617 PLA2R1Q13018 1463 aa8.15□□□□□ -1.1
PTPRD-206ENST00000397617 KDM5AP29375 1690 aaKnown RBP8.15□□□□□ -1.11
PTPRD-206ENST00000397617 KIDINS220Q9ULH0 1771 aa8.14□□□□□ -1.11
PTPRD-206ENST00000397617 TRAPPC8Q9Y2L5 1435 aa8.14□□□□□ -1.11
PTPRD-206ENST00000397617 CCDC7Q96M83 1385 aa8.14□□□□□ -1.11
PTPRD-206ENST00000397617 SETBP1Q9Y6X0 1596 aa8.14□□□□□ -1.11
PTPRD-206ENST00000397617 NRXN1Q9ULB1 1477 aa8.13□□□□□ -1.11
PTPRD-206ENST00000397617 SYNMO15061 1565 aa8.13□□□□□ -1.11
PTPRD-206ENST00000397617 ANP32CO43423 234 aa8.13□□□□□ -1.11
PTPRD-206ENST00000397617 KDM6BO15054 1643 aa8.13□□□□□ -1.11
PTPRD-206ENST00000397617 NCBP3Q53F19 620 aaKnown RBP8.13□□□□□ -1.11
PTPRD-206ENST00000397617 MAP3K4Q9Y6R4 1608 aa8.13□□□□□ -1.11
PTPRD-206ENST00000397617 USP47Q96K76 1375 aa8.12□□□□□ -1.11
PTPRD-206ENST00000397617 NOS1P29475 1434 aa8.12□□□□□ -1.11
PTPRD-206ENST00000397617 SPHKAPQ2M3C7 1700 aa8.12□□□□□ -1.11
PTPRD-206ENST00000397617 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
PTPRD-206ENST00000397617 NINLQ9Y2I6 1382 aa8.12□□□□□ -1.11
PTPRD-206ENST00000397617 CHIC2Q9UKJ5 165 aa8.11□□□□□ -1.11
PTPRD-206ENST00000397617 MROH1Q8NDA8 1641 aa8.11□□□□□ -1.11
PTPRD-206ENST00000397617 CEP152O94986 1710 aa8.11□□□□□ -1.11
PTPRD-206ENST00000397617 ZNF777Q9ULD5 760 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-206ENST00000397617 SIN3AQ96ST3 1273 aa8.1□□□□□ -1.11
PTPRD-206ENST00000397617 RALBP1Q15311 655 aa8.1□□□□□ -1.11
PTPRD-206ENST00000397617 SCAF1Q9H7N4 1312 aaKnown RBP8.09□□□□□ -1.11
PTPRD-206ENST00000397617 RICTORQ6R327 1708 aa8.09□□□□□ -1.11
PTPRD-206ENST00000397617 COL17A1Q9UMD9 1497 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-206ENST00000397617 KIF1BO60333 1816 aa8.09□□□□□ -1.11
PTPRD-206ENST00000397617 TRPM1Q7Z4N2 1603 aa8.08□□□□□ -1.12
PTPRD-206ENST00000397617 DIP2BQ9P265 1576 aa8.08□□□□□ -1.12
PTPRD-206ENST00000397617 SETD1BQ9UPS6 1966 aaKnown RBP8.08□□□□□ -1.12
PTPRD-206ENST00000397617 SCAF11Q99590 1463 aaKnown RBP8.08□□□□□ -1.12
PTPRD-206ENST00000397617 HNRNPMP52272 730 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTPRD-206ENST00000397617 ADGRB3O60242 1522 aa8.08□□□□□ -1.12
PTPRD-206ENST00000397617 DIP2CQ9Y2E4 1556 aa8.07□□□□□ -1.12
PTPRD-206ENST00000397617 BRD4O60885 1362 aaPredicted RBP8.07□□□□□ -1.12
PTPRD-206ENST00000397617 E9PCH4 1651 aa8.07□□□□□ -1.12
PTPRD-206ENST00000397617 ABCC3O15438 1527 aa8.07□□□□□ -1.12
PTPRD-206ENST00000397617 ARHGEF40Q8TER5 1519 aa8.07□□□□□ -1.12
PTPRD-206ENST00000397617 PIK3C2BO00750 1634 aa8.07□□□□□ -1.12
PTPRD-206ENST00000397617 MYO3AQ8NEV4 1616 aa8.06□□□□□ -1.12
PTPRD-206ENST00000397617 MADDQ8WXG6 1647 aa8.05□□□□□ -1.12
PTPRD-206ENST00000397617 NEUROD1Q13562 356 aa8.05□□□□□ -1.12
PTPRD-206ENST00000397617 PRKRIP1Q9H875 184 aaPredicted RBP8.04□□□□□ -1.12
PTPRD-206ENST00000397617 IQGAP1P46940 1657 aa8.04□□□□□ -1.12
PTPRD-206ENST00000397617 PDE3BQ13370 1112 aa8.04□□□□□ -1.12
PTPRD-206ENST00000397617 NPATQ14207 1427 aa8.04□□□□□ -1.12
PTPRD-206ENST00000397617 NSD2O96028 1365 aa8.04□□□□□ -1.12
PTPRD-206ENST00000397617 VGFO15240 615 aaPredicted RBP8.03□□□□□ -1.12
PTPRD-206ENST00000397617 SIRT1Q96EB6 747 aa8.03□□□□□ -1.12
PTPRD-206ENST00000397617 MIER1Q8N108 512 aa8.03□□□□□ -1.12
PTPRD-206ENST00000397617 AFAP1Q8N556 730 aa8.03□□□□□ -1.12
PTPRD-206ENST00000397617 IFT172Q9UG01 1749 aa8.03□□□□□ -1.12
PTPRD-206ENST00000397617 FRMPD1Q5SYB0 1578 aa8.03□□□□□ -1.12
PTPRD-206ENST00000397617 HSPA5P11021 654 aaKnown RBP8.03□□□□□ -1.12
PTPRD-206ENST00000397617 NLRP13Q86W25 1043 aa8.03□□□□□ -1.12
PTPRD-206ENST00000397617 KIF7Q2M1P5 1343 aa8.02□□□□□ -1.12
PTPRD-206ENST00000397617 HDGFP51858 240 aaKnown RBP8.02□□□□□ -1.13
PTPRD-206ENST00000397617 CARD11Q9BXL7 1154 aa8.02□□□□□ -1.13
PTPRD-206ENST00000397617 TMF1P82094 1093 aa8.02□□□□□ -1.13
PTPRD-206ENST00000397617 ZBED9Q6R2W3 1325 aa8.02□□□□□ -1.13
PTPRD-206ENST00000397617 NBPF8Q3BBV2 869 aa8.02□□□□□ -1.13
PTPRD-206ENST00000397617 KCNH8Q96L42 1107 aa8.01□□□□□ -1.13
PTPRD-206ENST00000397617 PARD3Q8TEW0 1356 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms