RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 C9orf84Q5VXU9 1444 aa7.23□□□□□ -1.25
PTPRD-205ENST00000397611 CHMP7Q8WUX9 453 aaPredicted RBP7.23□□□□□ -1.25
PTPRD-205ENST00000397611 ITSN2Q9NZM3 1697 aa7.23□□□□□ -1.25
PTPRD-205ENST00000397611 ADCY10Q96PN6 1610 aa7.23□□□□□ -1.25
PTPRD-205ENST00000397611 CANXP27824 592 aaKnown RBP7.23□□□□□ -1.25
PTPRD-205ENST00000397611 CCDC141Q6ZP82 1450 aa7.22□□□□□ -1.25
PTPRD-205ENST00000397611 PRG4Q92954 1404 aaPredicted RBP7.22□□□□□ -1.25
PTPRD-205ENST00000397611 PARD3Q8TEW0 1356 aa7.21□□□□□ -1.25
PTPRD-205ENST00000397611 TCERG1O14776 1098 aaKnown RBP7.21□□□□□ -1.26
PTPRD-205ENST00000397611 PRKCSHP14314 528 aaPredicted RBP7.21□□□□□ -1.26
PTPRD-205ENST00000397611 TMC1Q8TDI8 760 aa7.21□□□□□ -1.26
PTPRD-205ENST00000397611 USP35Q9P2H5 1018 aa7.21□□□□□ -1.26
PTPRD-205ENST00000397611 C11orf95C9JLR9 678 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-205ENST00000397611 NAP1L5Q96NT1 182 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-205ENST00000397611 CARD11Q9BXL7 1154 aa7.2□□□□□ -1.26
PTPRD-205ENST00000397611 SALL2Q9Y467 1007 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-205ENST00000397611 ZNF608Q9ULD9 1512 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-205ENST00000397611 ANP32BQ92688 251 aaKnown RBP7.2□□□□□ -1.26
PTPRD-205ENST00000397611 ABCA8O94911 1581 aa7.2□□□□□ -1.26
PTPRD-205ENST00000397611 CCDC144AA2RUR9 1427 aa7.19□□□□□ -1.26
PTPRD-205ENST00000397611 NCBP3Q53F19 620 aaKnown RBP7.19□□□□□ -1.26
PTPRD-205ENST00000397611 AAMPQ13685 434 aa7.19□□□□□ -1.26
PTPRD-205ENST00000397611 SBNO2Q9Y2G9 1366 aa7.18□□□□□ -1.26
PTPRD-205ENST00000397611 ARAP3Q8WWN8 1544 aa7.18□□□□□ -1.26
PTPRD-205ENST00000397611 ATP10BO94823 1461 aa7.18□□□□□ -1.26
PTPRD-205ENST00000397611 ZNF644Q9H582 1327 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-205ENST00000397611 KIF14Q15058 1648 aa7.18□□□□□ -1.26
PTPRD-205ENST00000397611 SENP3-EIF4A1A0A087X0R7 540 aa7.18□□□□□ -1.26
PTPRD-205ENST00000397611 PPM1GO15355 546 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-205ENST00000397611 PLB1Q6P1J6 1458 aa7.17□□□□□ -1.26
PTPRD-205ENST00000397611 B4GALNT3Q6L9W6 998 aa7.17□□□□□ -1.26
PTPRD-205ENST00000397611 DDRGK1Q96HY6 314 aa7.17□□□□□ -1.26
PTPRD-205ENST00000397611 PER1O15534 1290 aaPredicted RBP7.17□□□□□ -1.26
PTPRD-205ENST00000397611 MAGI2Q86UL8 1455 aa7.17□□□□□ -1.26
PTPRD-205ENST00000397611 PRAG1Q86YV5 1406 aa7.17□□□□□ -1.26
PTPRD-205ENST00000397611 WDR7Q9Y4E6 1490 aa7.16□□□□□ -1.26
PTPRD-205ENST00000397611 MAST1Q9Y2H9 1570 aa7.16□□□□□ -1.26
PTPRD-205ENST00000397611 RTEL1-TNFRSF6BF6WH68 1400 aa7.16□□□□□ -1.26
PTPRD-205ENST00000397611 EFCAB2Q5VUJ9 269 aa7.16□□□□□ -1.26
PTPRD-205ENST00000397611 COL17A1Q9UMD9 1497 aaPredicted RBP7.15□□□□□ -1.26
PTPRD-205ENST00000397611 ST20-MTHFSA0A0A6YYL1 179 aa7.15□□□□□ -1.26
PTPRD-205ENST00000397611 ERBINQ96RT1 1412 aa7.15□□□□□ -1.27
PTPRD-205ENST00000397611 LAMC1P11047 1609 aa7.15□□□□□ -1.27
PTPRD-205ENST00000397611 PUS7Q96PZ0 661 aaKnown RBP7.15□□□□□ -1.27
PTPRD-205ENST00000397611 PBRM1Q86U86 1689 aa7.15□□□□□ -1.27
PTPRD-205ENST00000397611 CEP170Q5SW79 1584 aa7.15□□□□□ -1.27
PTPRD-205ENST00000397611 EIF3AQ14152 1382 aaKnown RBP7.15□□□□□ -1.27
PTPRD-205ENST00000397611 SCAPERQ9BY12 1400 aa7.14□□□□□ -1.27
PTPRD-205ENST00000397611 NEURL4Q96JN8 1562 aa7.14□□□□□ -1.27
PTPRD-205ENST00000397611 PRDM15P57071 1507 aaPredicted RBP7.14□□□□□ -1.27
PTPRD-205ENST00000397611 TMF1P82094 1093 aa7.14□□□□□ -1.27
PTPRD-205ENST00000397611 TESK2Q96S53 571 aa7.14□□□□□ -1.27
PTPRD-205ENST00000397611 KDM5CP41229 1560 aa7.14□□□□□ -1.27
PTPRD-205ENST00000397611 IPO9Q96P70 1041 aaKnown RBP7.14□□□□□ -1.27
PTPRD-205ENST00000397611 UPF2Q9HAU5 1272 aaKnown RBP7.14□□□□□ -1.27
PTPRD-205ENST00000397611 ZMYM3Q14202 1370 aa7.13□□□□□ -1.27
PTPRD-205ENST00000397611 CCDC184Q52MB2 194 aa7.13□□□□□ -1.27
PTPRD-205ENST00000397611 KDM6BO15054 1643 aa7.13□□□□□ -1.27
PTPRD-205ENST00000397611 EIF4G3O43432 1585 aaKnown RBP7.13□□□□□ -1.27
PTPRD-205ENST00000397611 LRRIQ1Q96JM4 1722 aa7.13□□□□□ -1.27
PTPRD-205ENST00000397611 HSP90AA1P07900 732 aaKnown RBP7.13□□□□□ -1.27
PTPRD-205ENST00000397611 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.13□□□□□ -1.27
PTPRD-205ENST00000397611 NINLQ9Y2I6 1382 aa7.13□□□□□ -1.27
PTPRD-205ENST00000397611 PIK3C2GO75747 1445 aa7.12□□□□□ -1.27
PTPRD-205ENST00000397611 RCAN3Q9UKA8 241 aa7.12□□□□□ -1.27
PTPRD-205ENST00000397611 UHRF1BP1LA0JNW5 1464 aa7.12□□□□□ -1.27
PTPRD-205ENST00000397611 PLA2R1Q13018 1463 aa7.12□□□□□ -1.27
PTPRD-205ENST00000397611 RRP1P56182 461 aaKnown RBP7.12□□□□□ -1.27
PTPRD-205ENST00000397611 ADGBQ8N7X0 1667 aa7.12□□□□□ -1.27
PTPRD-205ENST00000397611 BLMP54132 1417 aaPredicted RBP7.12□□□□□ -1.27
PTPRD-205ENST00000397611 EIF2AK4Q9P2K8 1649 aaKnown RBP7.12□□□□□ -1.27
PTPRD-205ENST00000397611 ANO8Q9HCE9 1232 aaPredicted RBP7.12□□□□□ -1.27
PTPRD-205ENST00000397611 PLXNC1O60486 1568 aa7.11□□□□□ -1.27
PTPRD-205ENST00000397611 FAM135AQ9P2D6 1515 aa7.11□□□□□ -1.27
PTPRD-205ENST00000397611 POLR1AO95602 1720 aaPredicted RBP7.11□□□□□ -1.27
PTPRD-205ENST00000397611 TRIM44Q96DX7 344 aaPredicted RBP7.11□□□□□ -1.27
PTPRD-205ENST00000397611 DCAF11Q8TEB1 546 aa7.11□□□□□ -1.27
PTPRD-205ENST00000397611 PTPRTO14522 1441 aa7.11□□□□□ -1.27
PTPRD-205ENST00000397611 PLCH2O75038 1416 aa7.11□□□□□ -1.27
PTPRD-205ENST00000397611 DUOX2Q9NRD8 1548 aa7.1□□□□□ -1.27
PTPRD-205ENST00000397611 FOXD1Q16676 465 aa7.1□□□□□ -1.27
PTPRD-205ENST00000397611 ZNF777Q9ULD5 760 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-205ENST00000397611 MSH5O43196 834 aa7.1□□□□□ -1.27
PTPRD-205ENST00000397611 DNAJC5BQ9UF47 199 aa7.09□□□□□ -1.27
PTPRD-205ENST00000397611 UNC13BO14795 1591 aa7.09□□□□□ -1.27
PTPRD-205ENST00000397611 ABCC2Q92887 1545 aa7.08□□□□□ -1.28
PTPRD-205ENST00000397611 ZNF521Q96K83 1311 aa7.08□□□□□ -1.28
PTPRD-205ENST00000397611 CGNL1Q0VF96 1302 aa7.08□□□□□ -1.28
PTPRD-205ENST00000397611 BACH2Q9BYV9 841 aa7.08□□□□□ -1.28
PTPRD-205ENST00000397611 CROCC2H7BZ55 1655 aa7.07□□□□□ -1.28
PTPRD-205ENST00000397611 A2MP01023 1474 aa7.07□□□□□ -1.28
PTPRD-205ENST00000397611 SCAF11Q99590 1463 aaKnown RBP7.07□□□□□ -1.28
PTPRD-205ENST00000397611 BECN1Q14457 450 aa7.07□□□□□ -1.28
PTPRD-205ENST00000397611 KNSTRNQ9Y448 316 aa7.06□□□□□ -1.28
PTPRD-205ENST00000397611 CLASP1Q7Z460 1538 aa7.06□□□□□ -1.28
PTPRD-205ENST00000397611 CENPQQ7L2Z9 268 aaPredicted RBP7.06□□□□□ -1.28
PTPRD-205ENST00000397611 PDE3AQ14432 1141 aa7.06□□□□□ -1.28
PTPRD-205ENST00000397611 KANK1Q14678 1352 aa7.05□□□□□ -1.28
PTPRD-205ENST00000397611 AMER1Q5JTC6 1135 aaPredicted RBP7.05□□□□□ -1.28
PTPRD-205ENST00000397611 ARID3CA6NKF2 412 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms