RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 RALBP1Q15311 655 aa11□□□□□ -0.65
CNTN4-201ENST00000397459 LAMC1P11047 1609 aa11□□□□□ -0.65
CNTN4-201ENST00000397459 C9orf84Q5VXU9 1444 aa10.99□□□□□ -0.65
CNTN4-201ENST00000397459 C11orf95C9JLR9 678 aaPredicted RBP10.98□□□□□ -0.65
CNTN4-201ENST00000397459 FAM9BQ8IZU0 186 aa10.98□□□□□ -0.65
CNTN4-201ENST00000397459 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
CNTN4-201ENST00000397459 ARHGAP5Q13017 1502 aa10.98□□□□□ -0.65
CNTN4-201ENST00000397459 MYO5CQ9NQX4 1742 aa10.98□□□□□ -0.65
CNTN4-201ENST00000397459 TSPY4P0CV99 314 aa10.97□□□□□ -0.65
CNTN4-201ENST00000397459 TSPY10P0CW01 314 aa10.97□□□□□ -0.65
CNTN4-201ENST00000397459 E9PCH4 1651 aa10.97□□□□□ -0.65
CNTN4-201ENST00000397459 PDE3BQ13370 1112 aa10.97□□□□□ -0.65
CNTN4-201ENST00000397459 LRPPRCP42704 1394 aaKnown RBP10.96□□□□□ -0.65
CNTN4-201ENST00000397459 MAST1Q9Y2H9 1570 aa10.96□□□□□ -0.65
CNTN4-201ENST00000397459 BCORL1Q5H9F3 1711 aa10.96□□□□□ -0.65
CNTN4-201ENST00000397459 PLCH2O75038 1416 aa10.96□□□□□ -0.66
CNTN4-201ENST00000397459 CCDC141Q6ZP82 1450 aa10.95□□□□□ -0.66
CNTN4-201ENST00000397459 SYCP2Q9BX26 1530 aa10.95□□□□□ -0.66
CNTN4-201ENST00000397459 PKD2Q13563 968 aa10.95□□□□□ -0.66
CNTN4-201ENST00000397459 FOXD1Q16676 465 aa10.95□□□□□ -0.66
CNTN4-201ENST00000397459 MYBBP1AQ9BQG0 1328 aaKnown RBP10.95□□□□□ -0.66
CNTN4-201ENST00000397459 EIF2AK4Q9P2K8 1649 aaKnown RBP10.95□□□□□ -0.66
CNTN4-201ENST00000397459 PLEKHH2Q8IVE3 1493 aa10.94□□□□□ -0.66
CNTN4-201ENST00000397459 WDR7Q9Y4E6 1490 aa10.94□□□□□ -0.66
CNTN4-201ENST00000397459 CCDC184Q52MB2 194 aa10.93□□□□□ -0.66
CNTN4-201ENST00000397459 MSH5O43196 834 aa10.93□□□□□ -0.66
CNTN4-201ENST00000397459 EIF5BO60841 1220 aaKnown RBP10.93□□□□□ -0.66
CNTN4-201ENST00000397459 NUP155O75694 1391 aa10.93□□□□□ -0.66
CNTN4-201ENST00000397459 EFCAB2Q5VUJ9 269 aa10.92□□□□□ -0.66
CNTN4-201ENST00000397459 PNISRQ8TF01 805 aaKnown RBP10.92□□□□□ -0.66
CNTN4-201ENST00000397459 GPRASP1Q5JY77 1395 aa10.92□□□□□ -0.66
CNTN4-201ENST00000397459 UNC13BO14795 1591 aa10.92□□□□□ -0.66
CNTN4-201ENST00000397459 TMC1Q8TDI8 760 aa10.92□□□□□ -0.66
CNTN4-201ENST00000397459 ASXL2Q76L83 1435 aa10.91□□□□□ -0.66
CNTN4-201ENST00000397459 CARD11Q9BXL7 1154 aa10.91□□□□□ -0.66
CNTN4-201ENST00000397459 ANP32AP39687 249 aaKnown RBP10.9□□□□□ -0.66
CNTN4-201ENST00000397459 PLXNC1O60486 1568 aa10.9□□□□□ -0.66
CNTN4-201ENST00000397459 CCDC136Q96JN2 1154 aa10.9□□□□□ -0.67
CNTN4-201ENST00000397459 TRPM1Q7Z4N2 1603 aa10.89□□□□□ -0.67
CNTN4-201ENST00000397459 ATP10AO60312 1499 aa10.89□□□□□ -0.67
CNTN4-201ENST00000397459 IRX6P78412 446 aaPredicted RBP10.89□□□□□ -0.67
CNTN4-201ENST00000397459 NLRP13Q86W25 1043 aa10.89□□□□□ -0.67
CNTN4-201ENST00000397459 STAC3Q96MF2 364 aa10.89□□□□□ -0.67
CNTN4-201ENST00000397459 NOP58Q9Y2X3 529 aaKnown RBP10.89□□□□□ -0.67
CNTN4-201ENST00000397459 ABCC1P33527 1531 aa10.88□□□□□ -0.67
CNTN4-201ENST00000397459 ARAP3Q8WWN8 1544 aa10.88□□□□□ -0.67
CNTN4-201ENST00000397459 FAM135AQ9P2D6 1515 aa10.88□□□□□ -0.67
CNTN4-201ENST00000397459 PARD3Q8TEW0 1356 aa10.88□□□□□ -0.67
CNTN4-201ENST00000397459 ABCA9Q8IUA7 1624 aa10.88□□□□□ -0.67
CNTN4-201ENST00000397459 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
CNTN4-201ENST00000397459 PRAG1Q86YV5 1406 aa10.88□□□□□ -0.67
CNTN4-201ENST00000397459 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
CNTN4-201ENST00000397459 CCDC144AA2RUR9 1427 aa10.87□□□□□ -0.67
CNTN4-201ENST00000397459 TRAPPC8Q9Y2L5 1435 aa10.87□□□□□ -0.67
CNTN4-201ENST00000397459 IQGAP3Q86VI3 1631 aa10.86□□□□□ -0.67
CNTN4-201ENST00000397459 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
CNTN4-201ENST00000397459 MS4A1P11836 297 aa10.86□□□□□ -0.67
CNTN4-201ENST00000397459 PRDM15P57071 1507 aaPredicted RBP10.86□□□□□ -0.67
CNTN4-201ENST00000397459 COL17A1Q9UMD9 1497 aaPredicted RBP10.86□□□□□ -0.67
CNTN4-201ENST00000397459 FANCAO15360 1455 aa10.85□□□□□ -0.67
CNTN4-201ENST00000397459 MAGI2Q86UL8 1455 aa10.85□□□□□ -0.67
CNTN4-201ENST00000397459 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
CNTN4-201ENST00000397459 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
CNTN4-201ENST00000397459 DUOX2Q9NRD8 1548 aa10.83□□□□□ -0.68
CNTN4-201ENST00000397459 ERBINQ96RT1 1412 aa10.83□□□□□ -0.68
CNTN4-201ENST00000397459 RRP1P56182 461 aaKnown RBP10.83□□□□□ -0.68
CNTN4-201ENST00000397459 BLMP54132 1417 aaPredicted RBP10.83□□□□□ -0.68
CNTN4-201ENST00000397459 SPAG9O60271 1321 aaKnown RBP10.82□□□□□ -0.68
CNTN4-201ENST00000397459 RNF17Q9BXT8 1623 aaKnown RBP10.82□□□□□ -0.68
CNTN4-201ENST00000397459 ST20-MTHFSA0A0A6YYL1 179 aa10.81□□□□□ -0.68
CNTN4-201ENST00000397459 RTEL1-TNFRSF6BF6WH68 1400 aa10.81□□□□□ -0.68
CNTN4-201ENST00000397459 ZNF326Q5BKZ1 582 aaKnown RBP10.81□□□□□ -0.68
CNTN4-201ENST00000397459 NEURL4Q96JN8 1562 aa10.81□□□□□ -0.68
CNTN4-201ENST00000397459 SCAPERQ9BY12 1400 aa10.8□□□□□ -0.68
CNTN4-201ENST00000397459 CYB5RLQ6IPT4 315 aa10.8□□□□□ -0.68
CNTN4-201ENST00000397459 USP35Q9P2H5 1018 aa10.8□□□□□ -0.68
CNTN4-201ENST00000397459 RCAN3Q9UKA8 241 aa10.8□□□□□ -0.68
CNTN4-201ENST00000397459 ADGRL1O94910 1474 aa10.8□□□□□ -0.68
CNTN4-201ENST00000397459 CDCA8Q53HL2 280 aa10.8□□□□□ -0.68
CNTN4-201ENST00000397459 DCAF11Q8TEB1 546 aa10.8□□□□□ -0.68
CNTN4-201ENST00000397459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.8□□□□□ -0.68
CNTN4-201ENST00000397459 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
CNTN4-201ENST00000397459 ZFYVE16Q7Z3T8 1539 aa10.8□□□□□ -0.68
CNTN4-201ENST00000397459 CD109Q6YHK3 1445 aa10.79□□□□□ -0.68
CNTN4-201ENST00000397459 RIMBP3CA6NJZ7 1639 aa10.79□□□□□ -0.68
CNTN4-201ENST00000397459 RIMBP3BA6NNM3 1639 aa10.79□□□□□ -0.68
CNTN4-201ENST00000397459 RIMBP3Q9UFD9 1639 aa10.79□□□□□ -0.68
CNTN4-201ENST00000397459 RTL5Q5HYW3 569 aaPredicted RBP10.79□□□□□ -0.68
CNTN4-201ENST00000397459 TMF1P82094 1093 aa10.78□□□□□ -0.68
CNTN4-201ENST00000397459 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
CNTN4-201ENST00000397459 A2MP01023 1474 aa10.78□□□□□ -0.68
CNTN4-201ENST00000397459 POLR3GLQ9BT43 218 aa10.78□□□□□ -0.68
CNTN4-201ENST00000397459 NPC1L1Q9UHC9 1359 aa10.78□□□□□ -0.68
CNTN4-201ENST00000397459 DDRGK1Q96HY6 314 aa10.77□□□□□ -0.69
CNTN4-201ENST00000397459 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.69
CNTN4-201ENST00000397459 ATP7AQ04656 1500 aa10.77□□□□□ -0.69
CNTN4-201ENST00000397459 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
CNTN4-201ENST00000397459 EIF3AQ14152 1382 aaKnown RBP10.75□□□□□ -0.69
CNTN4-201ENST00000397459 SYNMO15061 1565 aa10.75□□□□□ -0.69
CNTN4-201ENST00000397459 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms