RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 CUX1P39880 1505 aa16.44■□□□□ 0.22
GREB1-206ENST00000396123 CHMP4AQ9BY43 222 aa16.43■□□□□ 0.22
GREB1-206ENST00000396123 GOLGA6L6A8MZA4 724 aa16.43■□□□□ 0.22
GREB1-206ENST00000396123 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
GREB1-206ENST00000396123 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
GREB1-206ENST00000396123 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
GREB1-206ENST00000396123 MSNP26038 577 aaKnown RBP16.42■□□□□ 0.22
GREB1-206ENST00000396123 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
GREB1-206ENST00000396123 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
GREB1-206ENST00000396123 E9PSI1 815 aa16.41■□□□□ 0.22
GREB1-206ENST00000396123 NRDCO43847 1150 aa16.41■□□□□ 0.22
GREB1-206ENST00000396123 PLIN1O60240 522 aa16.4■□□□□ 0.22
GREB1-206ENST00000396123 HMMRO75330 724 aa16.4■□□□□ 0.22
GREB1-206ENST00000396123 CCDC7Q96M83 1385 aa16.4■□□□□ 0.22
GREB1-206ENST00000396123 ZNF644Q9H582 1327 aaPredicted RBP16.39■□□□□ 0.21
GREB1-206ENST00000396123 PDE4AP27815 886 aa16.39■□□□□ 0.21
GREB1-206ENST00000396123 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.21
GREB1-206ENST00000396123 CASKIN1Q8WXD9 1431 aa16.39■□□□□ 0.21
GREB1-206ENST00000396123 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
GREB1-206ENST00000396123 VGFO15240 615 aaPredicted RBP16.38■□□□□ 0.21
GREB1-206ENST00000396123 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
GREB1-206ENST00000396123 KIF7Q2M1P5 1343 aa16.38■□□□□ 0.21
GREB1-206ENST00000396123 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
GREB1-206ENST00000396123 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
GREB1-206ENST00000396123 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
GREB1-206ENST00000396123 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
GREB1-206ENST00000396123 FAM161AQ3B820 660 aa16.36■□□□□ 0.21
GREB1-206ENST00000396123 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
GREB1-206ENST00000396123 APAF1O14727 1248 aa16.35■□□□□ 0.21
GREB1-206ENST00000396123 EID1Q9Y6B2 187 aa16.35■□□□□ 0.21
GREB1-206ENST00000396123 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
GREB1-206ENST00000396123 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
GREB1-206ENST00000396123 CHAF1AQ13111 956 aaPredicted RBP16.35■□□□□ 0.21
GREB1-206ENST00000396123 NGDNQ8NEJ9 315 aaKnown RBP16.35■□□□□ 0.21
GREB1-206ENST00000396123 SLC4A10Q6U841 1118 aa16.34■□□□□ 0.21
GREB1-206ENST00000396123 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
GREB1-206ENST00000396123 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
GREB1-206ENST00000396123 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
GREB1-206ENST00000396123 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
GREB1-206ENST00000396123 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.21
GREB1-206ENST00000396123 CSB-PGBD3P0DP91 1061 aa16.33■□□□□ 0.2
GREB1-206ENST00000396123 AMPHP49418 695 aa16.33■□□□□ 0.2
GREB1-206ENST00000396123 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
GREB1-206ENST00000396123 TRIM6-TRIM34B2RNG4 842 aa16.32■□□□□ 0.2
GREB1-206ENST00000396123 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
GREB1-206ENST00000396123 GOLGA6L3A6NEY3 463 aa16.32■□□□□ 0.2
GREB1-206ENST00000396123 ANKRD50Q9ULJ7 1429 aa16.31■□□□□ 0.2
GREB1-206ENST00000396123 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
GREB1-206ENST00000396123 FANCIQ9NVI1 1328 aa16.31■□□□□ 0.2
GREB1-206ENST00000396123 COG6Q9Y2V7 657 aa16.31■□□□□ 0.2
GREB1-206ENST00000396123 WASHC2AQ641Q2 1341 aa16.3■□□□□ 0.2
GREB1-206ENST00000396123 DRC7Q8IY82 874 aa16.3■□□□□ 0.2
GREB1-206ENST00000396123 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
GREB1-206ENST00000396123 MIA2Q96PC5 1412 aa16.29■□□□□ 0.2
GREB1-206ENST00000396123 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
GREB1-206ENST00000396123 NUTM2FA1L443 756 aa16.29■□□□□ 0.2
GREB1-206ENST00000396123 ELL2O00472 640 aaPredicted RBP16.28■□□□□ 0.2
GREB1-206ENST00000396123 AQRO60306 1485 aaKnown RBP eCLIP16.28■□□□□ 0.21e-6■■■□□ 17.3
GREB1-206ENST00000396123 COG3Q96JB2 828 aa16.27■□□□□ 0.2
GREB1-206ENST00000396123 CFTRP13569 1480 aa16.27■□□□□ 0.2
GREB1-206ENST00000396123 TULP1O00294 542 aaPredicted RBP16.27■□□□□ 0.2
GREB1-206ENST00000396123 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
GREB1-206ENST00000396123 MINK1Q8N4C8 1332 aaPredicted RBP16.26■□□□□ 0.19
GREB1-206ENST00000396123 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
GREB1-206ENST00000396123 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
GREB1-206ENST00000396123 ST18O60284 1047 aa16.26■□□□□ 0.19
GREB1-206ENST00000396123 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
GREB1-206ENST00000396123 ANKRD45Q5TZF3 282 aa16.25■□□□□ 0.19
GREB1-206ENST00000396123 KIAA2012Q0VF49 1180 aa16.25■□□□□ 0.19
GREB1-206ENST00000396123 LTV1Q96GA3 475 aaPredicted RBP16.25■□□□□ 0.19
GREB1-206ENST00000396123 ZNF330Q9Y3S2 320 aaPredicted RBP16.25■□□□□ 0.19
GREB1-206ENST00000396123 SLC4A3P48751 1232 aa16.25■□□□□ 0.19
GREB1-206ENST00000396123 DIAPH1O60610 1272 aaKnown RBP16.23■□□□□ 0.19
GREB1-206ENST00000396123 BRD4O60885 1362 aaPredicted RBP16.23■□□□□ 0.19
GREB1-206ENST00000396123 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
GREB1-206ENST00000396123 RUNDC1Q96C34 613 aa16.22■□□□□ 0.19
GREB1-206ENST00000396123 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
GREB1-206ENST00000396123 GORABQ5T7V8 394 aa16.22■□□□□ 0.19
GREB1-206ENST00000396123 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
GREB1-206ENST00000396123 DZIP1LQ8IYY4 767 aaKnown RBP16.21■□□□□ 0.19
GREB1-206ENST00000396123 CHMP3Q9Y3E7 222 aa16.21■□□□□ 0.19
GREB1-206ENST00000396123 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.18
GREB1-206ENST00000396123 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
GREB1-206ENST00000396123 RIPK4P57078 832 aa16.2■□□□□ 0.18
GREB1-206ENST00000396123 TOP2BQ02880 1626 aa16.2■□□□□ 0.18
GREB1-206ENST00000396123 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
GREB1-206ENST00000396123 CSPP1Q1MSJ5 1256 aa16.19■□□□□ 0.18
GREB1-206ENST00000396123 GSE1Q14687 1217 aa16.17■□□□□ 0.18
GREB1-206ENST00000396123 TAF7LQ5H9L4 462 aa16.17■□□□□ 0.18
GREB1-206ENST00000396123 HSP90B1P14625 803 aaKnown RBP16.16■□□□□ 0.18
GREB1-206ENST00000396123 API5Q9BZZ5 524 aaKnown RBP16.16■□□□□ 0.18
GREB1-206ENST00000396123 HFM1A2PYH4 1435 aa16.16■□□□□ 0.18
GREB1-206ENST00000396123 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
GREB1-206ENST00000396123 RILPL2Q969X0 211 aa16.15■□□□□ 0.18
GREB1-206ENST00000396123 KIF16BQ96L93 1317 aa16.15■□□□□ 0.18
GREB1-206ENST00000396123 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
GREB1-206ENST00000396123 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.17
GREB1-206ENST00000396123 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
GREB1-206ENST00000396123 AAMPQ13685 434 aa16.14■□□□□ 0.17
GREB1-206ENST00000396123 CCDC9Q9Y3X0 531 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms