RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 IFT140Q96RY7 1462 aa9.4□□□□□ -0.9
BDNF-207ENST00000395986 FHAD1B1AJZ9 1412 aa9.4□□□□□ -0.9
BDNF-207ENST00000395986 RIPK4P57078 832 aa9.4□□□□□ -0.9
BDNF-207ENST00000395986 KTN1Q86UP2 1357 aaKnown RBP9.4□□□□□ -0.9
BDNF-207ENST00000395986 UQCRHLA0A096LP55 91 aa9.4□□□□□ -0.9
BDNF-207ENST00000395986 UQCRHP07919 91 aa9.4□□□□□ -0.9
BDNF-207ENST00000395986 UPF2Q9HAU5 1272 aaKnown RBP9.4□□□□□ -0.9
BDNF-207ENST00000395986 GTF2E1P29083 439 aaPredicted RBP9.39□□□□□ -0.91
BDNF-207ENST00000395986 GAS2L3Q86XJ1 694 aa9.39□□□□□ -0.91
BDNF-207ENST00000395986 DNTTIP2Q5QJE6 756 aaKnown RBP9.39□□□□□ -0.91
BDNF-207ENST00000395986 CENPQQ7L2Z9 268 aaPredicted RBP9.39□□□□□ -0.91
BDNF-207ENST00000395986 TBC1D2Q9BYX2 928 aa9.39□□□□□ -0.91
BDNF-207ENST00000395986 MFAP1P55081 439 aaKnown RBP9.38□□□□□ -0.91
BDNF-207ENST00000395986 ABCA5Q8WWZ7 1642 aa9.38□□□□□ -0.91
BDNF-207ENST00000395986 AQRO60306 1485 aaKnown RBP eCLIP9.38□□□□□ -0.91
BDNF-207ENST00000395986 ABCA10Q8WWZ4 1543 aa9.37□□□□□ -0.91
BDNF-207ENST00000395986 TNNT2P45379 298 aaPredicted RBP9.36□□□□□ -0.91
BDNF-207ENST00000395986 CDK11BP21127 795 aaKnown RBP9.36□□□□□ -0.91
BDNF-207ENST00000395986 STAC3Q96MF2 364 aa9.36□□□□□ -0.91
BDNF-207ENST00000395986 SPDYE4A6NLX3 237 aa9.36□□□□□ -0.91
BDNF-207ENST00000395986 CCDC18Q5T9S5 1454 aa9.35□□□□□ -0.91
BDNF-207ENST00000395986 TDRD9Q8NDG6 1382 aaKnown RBP9.35□□□□□ -0.91
BDNF-207ENST00000395986 FSD2A1L4K1 749 aa9.35□□□□□ -0.91
BDNF-207ENST00000395986 IGHDP01880 384 aa9.35□□□□□ -0.91
BDNF-207ENST00000395986 PBRM1Q86U86 1689 aa9.34□□□□□ -0.91
BDNF-207ENST00000395986 CERS3Q8IU89 383 aa9.34□□□□□ -0.91
BDNF-207ENST00000395986 CGNQ9P2M7 1197 aaKnown RBP9.34□□□□□ -0.91
BDNF-207ENST00000395986 BCAR3O75815 825 aa9.34□□□□□ -0.91
BDNF-207ENST00000395986 MPHOSPH9Q99550 1183 aa9.34□□□□□ -0.91
BDNF-207ENST00000395986 COG6Q9Y2V7 657 aa9.33□□□□□ -0.92
BDNF-207ENST00000395986 NASPP49321 788 aaPredicted RBP9.33□□□□□ -0.92
BDNF-207ENST00000395986 PPP4R3BQ5MIZ7 849 aa9.33□□□□□ -0.92
BDNF-207ENST00000395986 CCDC146Q8IYE0 955 aa9.33□□□□□ -0.92
BDNF-207ENST00000395986 USP19O94966 1318 aa9.33□□□□□ -0.92
BDNF-207ENST00000395986 CARMIL1Q5VZK9 1371 aa9.32□□□□□ -0.92
BDNF-207ENST00000395986 AEBP1Q8IUX7 1158 aa9.32□□□□□ -0.92
BDNF-207ENST00000395986 CLUAP1Q96AJ1 413 aa9.32□□□□□ -0.92
BDNF-207ENST00000395986 NCOA1Q15788 1441 aa9.32□□□□□ -0.92
BDNF-207ENST00000395986 SLC4A1APQ9BWU0 796 aaKnown RBP9.32□□□□□ -0.92
BDNF-207ENST00000395986 FBLN2P98095 1184 aa9.32□□□□□ -0.92
BDNF-207ENST00000395986 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
BDNF-207ENST00000395986 PANK1Q8TE04 598 aa9.31□□□□□ -0.92
BDNF-207ENST00000395986 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
BDNF-207ENST00000395986 ANTXR1Q9H6X2 564 aa9.31□□□□□ -0.92
BDNF-207ENST00000395986 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.31□□□□□ -0.92
BDNF-207ENST00000395986 ZSCAN30Q86W11 494 aa9.31□□□□□ -0.92
BDNF-207ENST00000395986 KDM2BQ8NHM5 1336 aa9.31□□□□□ -0.92
BDNF-207ENST00000395986 ZNF830Q96NB3 372 aaPredicted RBP9.31□□□□□ -0.92
BDNF-207ENST00000395986 TRERF1Q96PN7 1200 aa9.31□□□□□ -0.92
BDNF-207ENST00000395986 CARD11Q9BXL7 1154 aa9.31□□□□□ -0.92
BDNF-207ENST00000395986 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.3□□□□□ -0.92
BDNF-207ENST00000395986 ZBTB9Q96C00 473 aa9.3□□□□□ -0.92
BDNF-207ENST00000395986 ARHGAP35Q9NRY4 1499 aa9.3□□□□□ -0.92
BDNF-207ENST00000395986 PTMAP06454 111 aaKnown RBP9.3□□□□□ -0.92
BDNF-207ENST00000395986 RNF214Q8ND24 703 aa9.3□□□□□ -0.92
BDNF-207ENST00000395986 CHMP5Q9NZZ3 219 aa9.3□□□□□ -0.92
BDNF-207ENST00000395986 CHD1O14646 1710 aa9.3□□□□□ -0.92
BDNF-207ENST00000395986 ST20-MTHFSA0A0A6YYL1 179 aa9.3□□□□□ -0.92
BDNF-207ENST00000395986 OFD1O75665 1012 aa9.29□□□□□ -0.92
BDNF-207ENST00000395986 MAP3K1Q13233 1512 aa9.29□□□□□ -0.92
BDNF-207ENST00000395986 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
BDNF-207ENST00000395986 FOXD4L4Q8WXT5 416 aaPredicted RBP9.29□□□□□ -0.92
BDNF-207ENST00000395986 MTUS2Q5JR59 1369 aa9.29□□□□□ -0.92
BDNF-207ENST00000395986 GAPVD1Q14C86 1478 aa9.29□□□□□ -0.92
BDNF-207ENST00000395986 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
BDNF-207ENST00000395986 PLPPR3Q6T4P5 718 aa9.29□□□□□ -0.92
BDNF-207ENST00000395986 DDX49Q9Y6V7 483 aaKnown RBP9.29□□□□□ -0.92
BDNF-207ENST00000395986 SMAP1Q8IYB5 467 aaPredicted RBP9.28□□□□□ -0.92
BDNF-207ENST00000395986 MYBBP1AQ9BQG0 1328 aaKnown RBP9.28□□□□□ -0.92
BDNF-207ENST00000395986 DHX29Q7Z478 1369 aaKnown RBP9.28□□□□□ -0.92
BDNF-207ENST00000395986 WDR43Q15061 677 aaKnown RBP eCLIP9.28□□□□□ -0.92
BDNF-207ENST00000395986 HSCBQ8IWL3 235 aa9.28□□□□□ -0.92
BDNF-207ENST00000395986 PANK3Q9H999 370 aa9.28□□□□□ -0.92
BDNF-207ENST00000395986 PTPRKQ15262 1439 aa9.28□□□□□ -0.92
BDNF-207ENST00000395986 NCOA2Q15596 1464 aa9.27□□□□□ -0.92
BDNF-207ENST00000395986 ZNF771Q7L3S4 317 aaPredicted RBP9.27□□□□□ -0.92
BDNF-207ENST00000395986 UACAQ9BZF9 1416 aa9.27□□□□□ -0.93
BDNF-207ENST00000395986 ADAMTS8Q9UP79 889 aa9.27□□□□□ -0.93
BDNF-207ENST00000395986 SNAPC4Q5SXM2 1469 aa9.27□□□□□ -0.93
BDNF-207ENST00000395986 LRRC9Q6ZRR7 1453 aa9.27□□□□□ -0.93
BDNF-207ENST00000395986 PLCB2Q00722 1185 aa9.26□□□□□ -0.93
BDNF-207ENST00000395986 USP47Q96K76 1375 aa9.26□□□□□ -0.93
BDNF-207ENST00000395986 TNPO1Q92973 898 aaKnown RBP9.26□□□□□ -0.93
BDNF-207ENST00000395986 CENPJQ9HC77 1338 aaPredicted RBP9.26□□□□□ -0.93
BDNF-207ENST00000395986 CAVIN1Q6NZI2 390 aaKnown RBP9.26□□□□□ -0.93
BDNF-207ENST00000395986 GRIN2BQ13224 1484 aa9.26□□□□□ -0.93
BDNF-207ENST00000395986 DDX11L8A8MPP1 907 aa9.25□□□□□ -0.93
BDNF-207ENST00000395986 ZSCAN20P17040 1043 aaPredicted RBP9.25□□□□□ -0.93
BDNF-207ENST00000395986 PDE3BQ13370 1112 aa9.25□□□□□ -0.93
BDNF-207ENST00000395986 FOXD4L6Q3SYB3 417 aaPredicted RBP9.25□□□□□ -0.93
BDNF-207ENST00000395986 FOXD4L3Q6VB84 417 aaPredicted RBP9.25□□□□□ -0.93
BDNF-207ENST00000395986 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
BDNF-207ENST00000395986 ERICH3Q5RHP9 1530 aa9.25□□□□□ -0.93
BDNF-207ENST00000395986 C17orf53Q8N3J3 647 aaPredicted RBP9.25□□□□□ -0.93
BDNF-207ENST00000395986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
BDNF-207ENST00000395986 DMTNQ08495 405 aa9.25□□□□□ -0.93
BDNF-207ENST00000395986 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
BDNF-207ENST00000395986 MAP7D2Q96T17 732 aa9.25□□□□□ -0.93
BDNF-207ENST00000395986 C22orf23Q9BZE7 217 aa9.25□□□□□ -0.93
BDNF-207ENST00000395986 TAF7LQ5H9L4 462 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms