RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CYB5RLQ6IPT4 315 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 TERF2IPQ9NYB0 399 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 USP47Q96K76 1375 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 UHRF1BP1LA0JNW5 1464 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 RPGRIP1LQ68CZ1 1315 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 ARAP3Q8WWN8 1544 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 WDR7Q9Y4E6 1490 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 FANCAO15360 1455 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 ADGRL1O94910 1474 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 POGZQ7Z3K3 1410 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 POGKQ9P215 609 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 EID1Q9Y6B2 187 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 ABCC10Q5T3U5 1492 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 ARHGEF12Q9NZN5 1544 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 CD109Q6YHK3 1445 aa4.47□□□□□ -1.69
VPS13C-203ENST00000395896 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS13C-203ENST00000395896 ARHGEF5Q12774 1597 aa4.46□□□□□ -1.69
VPS13C-203ENST00000395896 ABCC5O15440 1437 aa4.46□□□□□ -1.69
VPS13C-203ENST00000395896 ADGRL2O95490 1459 aa4.46□□□□□ -1.69
VPS13C-203ENST00000395896 PDE3BQ13370 1112 aa4.46□□□□□ -1.7
VPS13C-203ENST00000395896 CEP170Q5SW79 1584 aa4.46□□□□□ -1.7
VPS13C-203ENST00000395896 CANXP27824 592 aaKnown RBP4.46□□□□□ -1.7
VPS13C-203ENST00000395896 CALD1Q05682 793 aaKnown RBP4.46□□□□□ -1.7
VPS13C-203ENST00000395896 MAPKBP1O60336 1514 aa4.45□□□□□ -1.7
VPS13C-203ENST00000395896 FAM9BQ8IZU0 186 aa4.45□□□□□ -1.7
VPS13C-203ENST00000395896 ZNF644Q9H582 1327 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-203ENST00000395896 ADCY10Q96PN6 1610 aa4.45□□□□□ -1.7
VPS13C-203ENST00000395896 CNTLNQ9NXG0 1405 aa4.45□□□□□ -1.7
VPS13C-203ENST00000395896 AFAP1Q8N556 730 aa4.45□□□□□ -1.7
VPS13C-203ENST00000395896 ABCA8O94911 1581 aa4.45□□□□□ -1.7
VPS13C-203ENST00000395896 EVC2Q86UK5 1308 aa4.45□□□□□ -1.7
VPS13C-203ENST00000395896 FAM69CQ0P6D2 419 aa4.45□□□□□ -1.7
VPS13C-203ENST00000395896 EIF2AK4Q9P2K8 1649 aaKnown RBP4.45□□□□□ -1.7
VPS13C-203ENST00000395896 KDM5BQ9UGL1 1544 aa4.44□□□□□ -1.7
VPS13C-203ENST00000395896 DENND4BO75064 1496 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-203ENST00000395896 UPF2Q9HAU5 1272 aaKnown RBP4.44□□□□□ -1.7
VPS13C-203ENST00000395896 HSPA5P11021 654 aaKnown RBP4.44□□□□□ -1.7
VPS13C-203ENST00000395896 CDC42BPAQ5VT25 1732 aa4.44□□□□□ -1.7
VPS13C-203ENST00000395896 HDGFL2Q7Z4V5 671 aaPredicted RBP4.44□□□□□ -1.7
VPS13C-203ENST00000395896 NEO1Q92859 1461 aa4.43□□□□□ -1.7
VPS13C-203ENST00000395896 PREX2Q70Z35 1606 aa4.43□□□□□ -1.7
VPS13C-203ENST00000395896 SCAF1Q9H7N4 1312 aaKnown RBP4.43□□□□□ -1.7
VPS13C-203ENST00000395896 ST20-MTHFSA0A0A6YYL1 179 aa4.43□□□□□ -1.7
VPS13C-203ENST00000395896 CGNL1Q0VF96 1302 aa4.43□□□□□ -1.7
VPS13C-203ENST00000395896 TRHP20396 242 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-203ENST00000395896 CNGB1Q14028 1251 aaPredicted RBP4.43□□□□□ -1.7
VPS13C-203ENST00000395896 MAPK8IP3Q9UPT6 1336 aa4.43□□□□□ -1.7
VPS13C-203ENST00000395896 CFAP44Q96MT7 982 aa4.43□□□□□ -1.7
VPS13C-203ENST00000395896 MYBBP1AQ9BQG0 1328 aaKnown RBP4.43□□□□□ -1.7
VPS13C-203ENST00000395896 PRKRIP1Q9H875 184 aaPredicted RBP4.42□□□□□ -1.7
VPS13C-203ENST00000395896 ASXL2Q76L83 1435 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 FAM135AQ9P2D6 1515 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 MAGI2Q86UL8 1455 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 KIF1BO60333 1816 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 SRPK2P78362 688 aaKnown RBP4.42□□□□□ -1.7
VPS13C-203ENST00000395896 DHX29Q7Z478 1369 aaKnown RBP4.42□□□□□ -1.7
VPS13C-203ENST00000395896 NINLQ9Y2I6 1382 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 ZBED9Q6R2W3 1325 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 CCDC136Q96JN2 1154 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 AAMPQ13685 434 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 SYCP2Q9BX26 1530 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 PLPPR3Q6T4P5 718 aa4.42□□□□□ -1.7
VPS13C-203ENST00000395896 FOXD1Q16676 465 aa4.41□□□□□ -1.7
VPS13C-203ENST00000395896 ANP32AP39687 249 aaKnown RBP4.41□□□□□ -1.7
VPS13C-203ENST00000395896 HDAC5Q9UQL6 1122 aa4.41□□□□□ -1.7
VPS13C-203ENST00000395896 CENPJQ9HC77 1338 aaPredicted RBP4.41□□□□□ -1.7
VPS13C-203ENST00000395896 MYH16Q9H6N6 1097 aa4.41□□□□□ -1.7
VPS13C-203ENST00000395896 CCDC7Q96M83 1385 aa4.41□□□□□ -1.7
VPS13C-203ENST00000395896 A2MP01023 1474 aa4.41□□□□□ -1.7
VPS13C-203ENST00000395896 PUS7Q96PZ0 661 aaKnown RBP4.41□□□□□ -1.7
VPS13C-203ENST00000395896 SHROOM2Q13796 1616 aa4.41□□□□□ -1.7
VPS13C-203ENST00000395896 LMOD3Q0VAK6 560 aa4.4□□□□□ -1.7
VPS13C-203ENST00000395896 THEMISQ8N1K5 641 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-203ENST00000395896 BRD4O60885 1362 aaPredicted RBP4.4□□□□□ -1.7
VPS13C-203ENST00000395896 C14orf37Q86TY3 774 aa4.4□□□□□ -1.71
VPS13C-203ENST00000395896 KDM5DQ9BY66 1539 aa4.4□□□□□ -1.71
VPS13C-203ENST00000395896 PLXNC1O60486 1568 aa4.4□□□□□ -1.71
VPS13C-203ENST00000395896 HIRIP3Q9BW71 556 aaPredicted RBP4.4□□□□□ -1.71
VPS13C-203ENST00000395896 UHRF1BP1Q6BDS2 1440 aa4.4□□□□□ -1.71
VPS13C-203ENST00000395896 MORC1Q86VD1 984 aa4.39□□□□□ -1.71
VPS13C-203ENST00000395896 ATP7AQ04656 1500 aa4.39□□□□□ -1.71
VPS13C-203ENST00000395896 FKBP8Q14318 412 aa4.39□□□□□ -1.71
VPS13C-203ENST00000395896 ATAD2Q6PL18 1390 aa4.39□□□□□ -1.71
VPS13C-203ENST00000395896 RTL5Q5HYW3 569 aaPredicted RBP4.39□□□□□ -1.71
VPS13C-203ENST00000395896 IPO8O15397 1037 aaKnown RBP4.39□□□□□ -1.71
VPS13C-203ENST00000395896 NPM2Q86SE8 214 aaKnown RBP4.39□□□□□ -1.71
VPS13C-203ENST00000395896 RALGAPBQ86X10 1494 aa4.39□□□□□ -1.71
VPS13C-203ENST00000395896 MAST1Q9Y2H9 1570 aa4.38□□□□□ -1.71
VPS13C-203ENST00000395896 MLH3Q9UHC1 1453 aa4.38□□□□□ -1.71
VPS13C-203ENST00000395896 ZCCHC11Q5TAX3 1644 aaKnown RBP4.38□□□□□ -1.71
VPS13C-203ENST00000395896 ZNF692Q9BU19 519 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-203ENST00000395896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.38□□□□□ -1.71
VPS13C-203ENST00000395896 ZNF428Q96B54 188 aa4.38□□□□□ -1.71
VPS13C-203ENST00000395896 ATP10AO60312 1499 aa4.38□□□□□ -1.71
VPS13C-203ENST00000395896 KIF7Q2M1P5 1343 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 PPP4R2Q9NY27 417 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 CDC42BPBQ9Y5S2 1711 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 NSD2O96028 1365 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 CROCC2H7BZ55 1655 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 SCAF11Q99590 1463 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms