RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
FGD4-201ENST00000395740 C11orf95C9JLR9 678 aaPredicted RBP6.83□□□□□ -1.32
FGD4-201ENST00000395740 CHMP7Q8WUX9 453 aaPredicted RBP6.83□□□□□ -1.32
FGD4-201ENST00000395740 EIF4G3O43432 1585 aaKnown RBP6.82□□□□□ -1.32
FGD4-201ENST00000395740 TCERG1O14776 1098 aaKnown RBP6.82□□□□□ -1.32
FGD4-201ENST00000395740 KIF15Q9NS87 1388 aa6.82□□□□□ -1.32
FGD4-201ENST00000395740 NBPF8Q3BBV2 869 aa6.82□□□□□ -1.32
FGD4-201ENST00000395740 CCDC184Q52MB2 194 aa6.82□□□□□ -1.32
FGD4-201ENST00000395740 SAMD1Q6SPF0 538 aaPredicted RBP6.82□□□□□ -1.32
FGD4-201ENST00000395740 UBE2Q2Q8WVN8 375 aa6.82□□□□□ -1.32
FGD4-201ENST00000395740 PLEKHH2Q8IVE3 1493 aa6.81□□□□□ -1.32
FGD4-201ENST00000395740 KIAA0586Q9BVV6 1533 aa6.81□□□□□ -1.32
FGD4-201ENST00000395740 RALBP1Q15311 655 aa6.81□□□□□ -1.32
FGD4-201ENST00000395740 RRP7BPQ9NSQ0 103 aa6.81□□□□□ -1.32
FGD4-201ENST00000395740 WASHC2CQ9Y4E1 1318 aa6.81□□□□□ -1.32
FGD4-201ENST00000395740 C1QBPQ07021 282 aaKnown RBP6.81□□□□□ -1.32
FGD4-201ENST00000395740 CEP170Q5SW79 1584 aa6.81□□□□□ -1.32
FGD4-201ENST00000395740 B4GALNT3Q6L9W6 998 aa6.81□□□□□ -1.32
FGD4-201ENST00000395740 PNISRQ8TF01 805 aaKnown RBP6.81□□□□□ -1.32
FGD4-201ENST00000395740 CDK13Q14004 1512 aaKnown RBP6.8□□□□□ -1.32
FGD4-201ENST00000395740 FAM9BQ8IZU0 186 aa6.8□□□□□ -1.32
FGD4-201ENST00000395740 TROQ12816 1431 aaPredicted RBP6.8□□□□□ -1.32
FGD4-201ENST00000395740 ZBTB47Q9UFB7 747 aaPredicted RBP6.8□□□□□ -1.32
FGD4-201ENST00000395740 RIMBP3CA6NJZ7 1639 aa6.8□□□□□ -1.32
FGD4-201ENST00000395740 RIMBP3BA6NNM3 1639 aa6.8□□□□□ -1.32
FGD4-201ENST00000395740 RIMBP3Q9UFD9 1639 aa6.8□□□□□ -1.32
FGD4-201ENST00000395740 USP47Q96K76 1375 aa6.79□□□□□ -1.32
FGD4-201ENST00000395740 CCDC136Q96JN2 1154 aa6.79□□□□□ -1.32
FGD4-201ENST00000395740 ARHGEF5Q12774 1597 aa6.79□□□□□ -1.32
FGD4-201ENST00000395740 IRX6P78412 446 aaPredicted RBP6.79□□□□□ -1.32
FGD4-201ENST00000395740 NUP153P49790 1475 aaKnown RBP6.79□□□□□ -1.32
FGD4-201ENST00000395740 CAMSAP2Q08AD1 1489 aa6.79□□□□□ -1.32
FGD4-201ENST00000395740 PTPRGP23470 1445 aa6.79□□□□□ -1.32
FGD4-201ENST00000395740 DISP1Q96F81 1524 aa6.78□□□□□ -1.32
FGD4-201ENST00000395740 GRIN2AQ12879 1464 aa6.78□□□□□ -1.32
FGD4-201ENST00000395740 MYBBP1AQ9BQG0 1328 aaKnown RBP6.78□□□□□ -1.32
FGD4-201ENST00000395740 PPM1GO15355 546 aaPredicted RBP6.78□□□□□ -1.32
FGD4-201ENST00000395740 RTL5Q5HYW3 569 aaPredicted RBP6.78□□□□□ -1.32
FGD4-201ENST00000395740 ATF5Q9Y2D1 282 aaPredicted RBP6.78□□□□□ -1.32
FGD4-201ENST00000395740 TRPM1Q7Z4N2 1603 aa6.77□□□□□ -1.33
FGD4-201ENST00000395740 CDC42BPAQ5VT25 1732 aa6.77□□□□□ -1.33
FGD4-201ENST00000395740 ANKRD30AQ9BXX3 1397 aa6.77□□□□□ -1.33
FGD4-201ENST00000395740 HECW2Q9P2P5 1572 aa6.76□□□□□ -1.33
FGD4-201ENST00000395740 GPATCH8Q9UKJ3 1502 aaKnown RBP6.76□□□□□ -1.33
FGD4-201ENST00000395740 EIF2AK4Q9P2K8 1649 aaKnown RBP6.76□□□□□ -1.33
FGD4-201ENST00000395740 DDRGK1Q96HY6 314 aa6.76□□□□□ -1.33
FGD4-201ENST00000395740 PARD3Q8TEW0 1356 aa6.76□□□□□ -1.33
FGD4-201ENST00000395740 SYNJ2O15056 1496 aa6.76□□□□□ -1.33
FGD4-201ENST00000395740 RRP1P56182 461 aaKnown RBP6.75□□□□□ -1.33
FGD4-201ENST00000395740 JPH4Q96JJ6 628 aa6.75□□□□□ -1.33
FGD4-201ENST00000395740 CHIC2Q9UKJ5 165 aa6.75□□□□□ -1.33
FGD4-201ENST00000395740 GPRASP1Q5JY77 1395 aa6.75□□□□□ -1.33
FGD4-201ENST00000395740 MAGI1Q96QZ7 1491 aaPredicted RBP6.75□□□□□ -1.33
FGD4-201ENST00000395740 MAST1Q9Y2H9 1570 aa6.75□□□□□ -1.33
FGD4-201ENST00000395740 BLMP54132 1417 aaPredicted RBP6.75□□□□□ -1.33
FGD4-201ENST00000395740 CLASP1Q7Z460 1538 aa6.75□□□□□ -1.33
FGD4-201ENST00000395740 PAK3O75914 559 aaPredicted RBP6.74□□□□□ -1.33
FGD4-201ENST00000395740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.74□□□□□ -1.33
FGD4-201ENST00000395740 VIRMAQ69YN4 1812 aaKnown RBP6.74□□□□□ -1.33
FGD4-201ENST00000395740 TMC1Q8TDI8 760 aa6.74□□□□□ -1.33
FGD4-201ENST00000395740 BACH2Q9BYV9 841 aa6.74□□□□□ -1.33
FGD4-201ENST00000395740 NUP160Q12769 1436 aa6.74□□□□□ -1.33
FGD4-201ENST00000395740 ANKRD50Q9ULJ7 1429 aa6.74□□□□□ -1.33
FGD4-201ENST00000395740 PRDM15P57071 1507 aaPredicted RBP6.73□□□□□ -1.33
FGD4-201ENST00000395740 NLRP13Q86W25 1043 aa6.73□□□□□ -1.33
FGD4-201ENST00000395740 UNC13BO14795 1591 aa6.73□□□□□ -1.33
FGD4-201ENST00000395740 ABCC10Q5T3U5 1492 aa6.72□□□□□ -1.33
FGD4-201ENST00000395740 RCAN3Q9UKA8 241 aa6.72□□□□□ -1.33
FGD4-201ENST00000395740 U3KPZ7 1027 aaPredicted RBP6.72□□□□□ -1.33
FGD4-201ENST00000395740 ATP10AO60312 1499 aa6.72□□□□□ -1.33
FGD4-201ENST00000395740 PDE4AP27815 886 aa6.72□□□□□ -1.33
FGD4-201ENST00000395740 RSPH4AQ5TD94 716 aa6.72□□□□□ -1.33
FGD4-201ENST00000395740 ABCA8O94911 1581 aa6.71□□□□□ -1.33
FGD4-201ENST00000395740 RNF17Q9BXT8 1623 aaKnown RBP6.71□□□□□ -1.33
FGD4-201ENST00000395740 PLB1Q6P1J6 1458 aa6.71□□□□□ -1.34
FGD4-201ENST00000395740 COL17A1Q9UMD9 1497 aaPredicted RBP6.71□□□□□ -1.34
FGD4-201ENST00000395740 POTEHQ6S545 545 aa6.71□□□□□ -1.34
FGD4-201ENST00000395740 DCAF8L1A6NGE4 600 aa6.7□□□□□ -1.34
FGD4-201ENST00000395740 MYO5CQ9NQX4 1742 aa6.7□□□□□ -1.34
FGD4-201ENST00000395740 PRAG1Q86YV5 1406 aa6.7□□□□□ -1.34
FGD4-201ENST00000395740 IQGAP3Q86VI3 1631 aa6.7□□□□□ -1.34
FGD4-201ENST00000395740 CFDP1Q9UEE9 299 aaPredicted RBP6.7□□□□□ -1.34
FGD4-201ENST00000395740 EIF3AQ14152 1382 aaKnown RBP6.7□□□□□ -1.34
FGD4-201ENST00000395740 C9orf84Q5VXU9 1444 aa6.7□□□□□ -1.34
FGD4-201ENST00000395740 PLXNC1O60486 1568 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 PKD2Q13563 968 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 NGEFQ8N5V2 710 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 CCDC144AA2RUR9 1427 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 CCDC141Q6ZP82 1450 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 NEURL4Q96JN8 1562 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 PREX2Q70Z35 1606 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 STAC3Q96MF2 364 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 CARD11Q9BXL7 1154 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 CARMIL2Q6F5E8 1435 aa6.69□□□□□ -1.34
FGD4-201ENST00000395740 ZNF644Q9H582 1327 aaPredicted RBP6.68□□□□□ -1.34
FGD4-201ENST00000395740 PER1O15534 1290 aaPredicted RBP6.68□□□□□ -1.34
FGD4-201ENST00000395740 KIAA1210Q9ULL0 1709 aa6.68□□□□□ -1.34
FGD4-201ENST00000395740 FAM135AQ9P2D6 1515 aa6.68□□□□□ -1.34
FGD4-201ENST00000395740 PRG4Q92954 1404 aaPredicted RBP6.68□□□□□ -1.34
FGD4-201ENST00000395740 ZMYM3Q14202 1370 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms