RNA–Protein interactions for RNA: ENST00000395310.6

SEC31A-205, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SEC31A, Length 4,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-205ENST00000395310 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
SEC31A-205ENST00000395310 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
SEC31A-205ENST00000395310 CENPJQ9HC77 1338 aaPredicted RBP16.76■□□□□ 0.27
SEC31A-205ENST00000395310 L1TD1Q5T7N2 865 aaKnown RBP16.76■□□□□ 0.27
SEC31A-205ENST00000395310 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
SEC31A-205ENST00000395310 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
SEC31A-205ENST00000395310 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
SEC31A-205ENST00000395310 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
SEC31A-205ENST00000395310 HSCBQ8IWL3 235 aa16.75■□□□□ 0.27
SEC31A-205ENST00000395310 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
SEC31A-205ENST00000395310 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
SEC31A-205ENST00000395310 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
SEC31A-205ENST00000395310 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.272e-7■■□□□ 14.3
SEC31A-205ENST00000395310 ANKRD50Q9ULJ7 1429 aa16.74■□□□□ 0.27
SEC31A-205ENST00000395310 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
SEC31A-205ENST00000395310 EFCAB5A4FU69 1503 aa16.73■□□□□ 0.27
SEC31A-205ENST00000395310 BCAR3O75815 825 aa16.73■□□□□ 0.27
SEC31A-205ENST00000395310 PNNQ9H307 717 aaKnown RBP16.73■□□□□ 0.27
SEC31A-205ENST00000395310 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
SEC31A-205ENST00000395310 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
SEC31A-205ENST00000395310 ITPRIPQ8IWB1 547 aa16.72■□□□□ 0.27
SEC31A-205ENST00000395310 GOLGA6L3A6NEY3 463 aa16.71■□□□□ 0.27
SEC31A-205ENST00000395310 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
SEC31A-205ENST00000395310 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
SEC31A-205ENST00000395310 GOLGA6L22H0YM25 854 aa16.7■□□□□ 0.26
SEC31A-205ENST00000395310 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
SEC31A-205ENST00000395310 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
SEC31A-205ENST00000395310 DAPK1P53355 1430 aa16.69■□□□□ 0.26
SEC31A-205ENST00000395310 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
SEC31A-205ENST00000395310 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
SEC31A-205ENST00000395310 PRG4Q92954 1404 aaPredicted RBP16.68■□□□□ 0.26
SEC31A-205ENST00000395310 KIAA1107Q9UPP5 1409 aa16.68■□□□□ 0.26
SEC31A-205ENST00000395310 UBE2Q2Q8WVN8 375 aa16.67■□□□□ 0.26
SEC31A-205ENST00000395310 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
SEC31A-205ENST00000395310 SUPT6HQ7KZ85 1726 aaKnown RBP16.66■□□□□ 0.26
SEC31A-205ENST00000395310 APBB1O00213 710 aa16.66■□□□□ 0.26
SEC31A-205ENST00000395310 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
SEC31A-205ENST00000395310 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
SEC31A-205ENST00000395310 CARMIL2Q6F5E8 1435 aa16.66■□□□□ 0.26
SEC31A-205ENST00000395310 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
SEC31A-205ENST00000395310 E9PSI1 815 aa16.65■□□□□ 0.26
SEC31A-205ENST00000395310 PPP2R1AP30153 589 aa16.65■□□□□ 0.26
SEC31A-205ENST00000395310 A0A0U1RQG5 324 aaPredicted RBP16.65■□□□□ 0.26
SEC31A-205ENST00000395310 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
SEC31A-205ENST00000395310 STK26Q9P289 416 aa16.65■□□□□ 0.26
SEC31A-205ENST00000395310 MIA2Q96PC5 1412 aa16.64■□□□□ 0.25
SEC31A-205ENST00000395310 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
SEC31A-205ENST00000395310 RPRD2Q5VT52 1461 aaKnown RBP16.63■□□□□ 0.25
SEC31A-205ENST00000395310 EPRSP07814 1512 aaKnown RBP16.62■□□□□ 0.25
SEC31A-205ENST00000395310 ABCC5O15440 1437 aa16.62■□□□□ 0.25
SEC31A-205ENST00000395310 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
SEC31A-205ENST00000395310 HSP90AA2PQ14568 343 aaPredicted RBP16.62■□□□□ 0.25
SEC31A-205ENST00000395310 KIF3BO15066 747 aa16.61■□□□□ 0.25
SEC31A-205ENST00000395310 SRPK2P78362 688 aaKnown RBP16.61■□□□□ 0.25
SEC31A-205ENST00000395310 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
SEC31A-205ENST00000395310 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
SEC31A-205ENST00000395310 POGKQ9P215 609 aa16.6■□□□□ 0.25
SEC31A-205ENST00000395310 GGT6Q6P531 493 aa16.6■□□□□ 0.25
SEC31A-205ENST00000395310 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
SEC31A-205ENST00000395310 PTMAP06454 111 aaKnown RBP16.59■□□□□ 0.25
SEC31A-205ENST00000395310 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
SEC31A-205ENST00000395310 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
SEC31A-205ENST00000395310 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
SEC31A-205ENST00000395310 DNTTIP2Q5QJE6 756 aaKnown RBP16.56■□□□□ 0.24
SEC31A-205ENST00000395310 PLCB2Q00722 1185 aa16.55■□□□□ 0.24
SEC31A-205ENST00000395310 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
SEC31A-205ENST00000395310 DHX29Q7Z478 1369 aaKnown RBP16.54■□□□□ 0.24
SEC31A-205ENST00000395310 GBP4Q96PP9 640 aa16.54■□□□□ 0.24
SEC31A-205ENST00000395310 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
SEC31A-205ENST00000395310 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
SEC31A-205ENST00000395310 MSNP26038 577 aaKnown RBP16.53■□□□□ 0.24
SEC31A-205ENST00000395310 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
SEC31A-205ENST00000395310 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.24
SEC31A-205ENST00000395310 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.24
SEC31A-205ENST00000395310 ROCK1Q13464 1354 aa16.52■□□□□ 0.24
SEC31A-205ENST00000395310 PLEKHG5O94827 1062 aa16.52■□□□□ 0.24
SEC31A-205ENST00000395310 SOX12O15370 315 aa16.52■□□□□ 0.23
SEC31A-205ENST00000395310 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
SEC31A-205ENST00000395310 ZKSCAN2Q63HK3 967 aa16.51■□□□□ 0.23
SEC31A-205ENST00000395310 SPAG9O60271 1321 aaKnown RBP16.51■□□□□ 0.23
SEC31A-205ENST00000395310 CFAP70Q5T0N1 1121 aa16.51■□□□□ 0.23
SEC31A-205ENST00000395310 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
SEC31A-205ENST00000395310 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
SEC31A-205ENST00000395310 C22orf23Q9BZE7 217 aa16.5■□□□□ 0.23
SEC31A-205ENST00000395310 LNPKQ9C0E8 428 aa16.5■□□□□ 0.23
SEC31A-205ENST00000395310 KANK1Q14678 1352 aa16.5■□□□□ 0.23
SEC31A-205ENST00000395310 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
SEC31A-205ENST00000395310 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
SEC31A-205ENST00000395310 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
SEC31A-205ENST00000395310 IPO8O15397 1037 aaKnown RBP16.49■□□□□ 0.23
SEC31A-205ENST00000395310 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
SEC31A-205ENST00000395310 EIF3AQ14152 1382 aaKnown RBP16.49■□□□□ 0.23
SEC31A-205ENST00000395310 HECW1Q76N89 1606 aa16.49■□□□□ 0.23
SEC31A-205ENST00000395310 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
SEC31A-205ENST00000395310 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
SEC31A-205ENST00000395310 IGHDP01880 384 aa16.48■□□□□ 0.23
SEC31A-205ENST00000395310 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
SEC31A-205ENST00000395310 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
SEC31A-205ENST00000395310 NOL8Q76FK4 1167 aaKnown RBP16.47■□□□□ 0.23
SEC31A-205ENST00000395310 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms