RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 ABCA6Q8N139 1617 aa20.72■□□□□ 0.91
CDC42SE2-202ENST00000395246 PTPRTO14522 1441 aa20.71■□□□□ 0.91
CDC42SE2-202ENST00000395246 ADGRL1O94910 1474 aa20.71■□□□□ 0.91
CDC42SE2-202ENST00000395246 RRP7BPQ9NSQ0 103 aa20.7■□□□□ 0.9
CDC42SE2-202ENST00000395246 KIAA1210Q9ULL0 1709 aa20.69■□□□□ 0.9
CDC42SE2-202ENST00000395246 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
CDC42SE2-202ENST00000395246 TRPM1Q7Z4N2 1603 aa20.68■□□□□ 0.9
CDC42SE2-202ENST00000395246 ARID3CA6NKF2 412 aa20.68■□□□□ 0.9
CDC42SE2-202ENST00000395246 SPATA31E1Q6ZUB1 1445 aa20.67■□□□□ 0.9
CDC42SE2-202ENST00000395246 DIP2CQ9Y2E4 1556 aa20.66■□□□□ 0.9
CDC42SE2-202ENST00000395246 EFCAB6Q5THR3 1501 aa20.65■□□□□ 0.9
CDC42SE2-202ENST00000395246 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
CDC42SE2-202ENST00000395246 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
CDC42SE2-202ENST00000395246 PIK3C2BO00750 1634 aa20.63■□□□□ 0.89
CDC42SE2-202ENST00000395246 HNRNPMP52272 730 aaKnown RBP eCLIP20.62■□□□□ 0.893e-7■■■■■ 27.8
CDC42SE2-202ENST00000395246 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
CDC42SE2-202ENST00000395246 CD109Q6YHK3 1445 aa20.62■□□□□ 0.89
CDC42SE2-202ENST00000395246 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
CDC42SE2-202ENST00000395246 DHX29Q7Z478 1369 aaKnown RBP20.6■□□□□ 0.89
CDC42SE2-202ENST00000395246 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
CDC42SE2-202ENST00000395246 AGLP35573 1532 aa20.57■□□□□ 0.88
CDC42SE2-202ENST00000395246 SCAPERQ9BY12 1400 aa20.57■□□□□ 0.88
CDC42SE2-202ENST00000395246 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
CDC42SE2-202ENST00000395246 CLTCL1P53675 1640 aa20.55■□□□□ 0.88
CDC42SE2-202ENST00000395246 CAMSAP1Q5T5Y3 1602 aa20.55■□□□□ 0.88
CDC42SE2-202ENST00000395246 MADDQ8WXG6 1647 aa20.54■□□□□ 0.88
CDC42SE2-202ENST00000395246 A2MP01023 1474 aa20.52■□□□□ 0.88
CDC42SE2-202ENST00000395246 NUP155O75694 1391 aa20.52■□□□□ 0.88
CDC42SE2-202ENST00000395246 IQGAP1P46940 1657 aa20.51■□□□□ 0.87
CDC42SE2-202ENST00000395246 NRXN1Q9ULB1 1477 aa20.51■□□□□ 0.87
CDC42SE2-202ENST00000395246 GPRASP1Q5JY77 1395 aa20.51■□□□□ 0.87
CDC42SE2-202ENST00000395246 ARHGAP31Q2M1Z3 1444 aa20.5■□□□□ 0.87
CDC42SE2-202ENST00000395246 KIF1BO60333 1816 aa20.48■□□□□ 0.87
CDC42SE2-202ENST00000395246 DIEXFQ68CQ4 756 aaKnown RBP20.48■□□□□ 0.87
CDC42SE2-202ENST00000395246 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
CDC42SE2-202ENST00000395246 SIGLEC1Q9BZZ2 1709 aa20.48■□□□□ 0.87
CDC42SE2-202ENST00000395246 ABCC3O15438 1527 aa20.47■□□□□ 0.87
CDC42SE2-202ENST00000395246 ADGRB3O60242 1522 aa20.47■□□□□ 0.87
CDC42SE2-202ENST00000395246 MYOM2P54296 1465 aa20.47■□□□□ 0.87
CDC42SE2-202ENST00000395246 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
CDC42SE2-202ENST00000395246 MYO3AQ8NEV4 1616 aa20.46■□□□□ 0.87
CDC42SE2-202ENST00000395246 SPAG9O60271 1321 aaKnown RBP20.45■□□□□ 0.86
CDC42SE2-202ENST00000395246 PPLO60437 1756 aa20.45■□□□□ 0.86
CDC42SE2-202ENST00000395246 MROH2AA6NES4 1674 aa20.44■□□□□ 0.86
CDC42SE2-202ENST00000395246 ARHGEF40Q8TER5 1519 aa20.44■□□□□ 0.86
CDC42SE2-202ENST00000395246 KDM5AP29375 1690 aaKnown RBP20.44■□□□□ 0.86
CDC42SE2-202ENST00000395246 PRAG1Q86YV5 1406 aa20.43■□□□□ 0.86
CDC42SE2-202ENST00000395246 STAC3Q96MF2 364 aa20.41■□□□□ 0.86
CDC42SE2-202ENST00000395246 PKD2Q13563 968 aa20.41■□□□□ 0.86
CDC42SE2-202ENST00000395246 L3MBTL2Q969R5 705 aa20.4■□□□□ 0.86
CDC42SE2-202ENST00000395246 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
CDC42SE2-202ENST00000395246 NPM1P06748 294 aaKnown RBP eCLIP20.39■□□□□ 0.85
CDC42SE2-202ENST00000395246 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
CDC42SE2-202ENST00000395246 ARID4BQ4LE39 1312 aaPredicted RBP20.38■□□□□ 0.85
CDC42SE2-202ENST00000395246 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
CDC42SE2-202ENST00000395246 NOS1P29475 1434 aa20.38■□□□□ 0.85
CDC42SE2-202ENST00000395246 PREX1Q8TCU6 1659 aa20.37■□□□□ 0.85
CDC42SE2-202ENST00000395246 SYNMO15061 1565 aa20.36■□□□□ 0.85
CDC42SE2-202ENST00000395246 CCDC144AA2RUR9 1427 aa20.36■□□□□ 0.85
CDC42SE2-202ENST00000395246 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
CDC42SE2-202ENST00000395246 AFAP1Q8N556 730 aa20.33■□□□□ 0.85
CDC42SE2-202ENST00000395246 NBPF8Q3BBV2 869 aa20.32■□□□□ 0.84
CDC42SE2-202ENST00000395246 NEUROD1Q13562 356 aa20.3■□□□□ 0.84
CDC42SE2-202ENST00000395246 KANK1Q14678 1352 aa20.28■□□□□ 0.84
CDC42SE2-202ENST00000395246 SPATA31D1Q6ZQQ2 1576 aa20.28■□□□□ 0.84
CDC42SE2-202ENST00000395246 UGGT1Q9NYU2 1555 aa20.27■□□□□ 0.83
CDC42SE2-202ENST00000395246 FOXD1Q16676 465 aa20.26■□□□□ 0.83
CDC42SE2-202ENST00000395246 NPATQ14207 1427 aa20.26■□□□□ 0.83
CDC42SE2-202ENST00000395246 TMEM131LA2VDJ0 1609 aa20.26■□□□□ 0.83
CDC42SE2-202ENST00000395246 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
CDC42SE2-202ENST00000395246 ZFYVE9O95405 1425 aa20.24■□□□□ 0.83
CDC42SE2-202ENST00000395246 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
CDC42SE2-202ENST00000395246 TSPOAP1O95153 1857 aa20.21■□□□□ 0.83
CDC42SE2-202ENST00000395246 SETD1AO15047 1707 aaKnown RBP20.21■□□□□ 0.83
CDC42SE2-202ENST00000395246 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
CDC42SE2-202ENST00000395246 YEATS2Q9ULM3 1422 aa20.19■□□□□ 0.82
CDC42SE2-202ENST00000395246 MYOM1P52179 1685 aa20.19■□□□□ 0.82
CDC42SE2-202ENST00000395246 ADGRB1O14514 1584 aa20.18■□□□□ 0.82
CDC42SE2-202ENST00000395246 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE2-202ENST00000395246 WASHC2AQ641Q2 1341 aa20.16■□□□□ 0.82
CDC42SE2-202ENST00000395246 EIF4G2P78344 907 aaKnown RBP eCLIP20.16■□□□□ 0.82
CDC42SE2-202ENST00000395246 HSPA5P11021 654 aaKnown RBP20.15■□□□□ 0.82
CDC42SE2-202ENST00000395246 CLTCQ00610 1675 aaKnown RBP20.15■□□□□ 0.82
CDC42SE2-202ENST00000395246 USP47Q96K76 1375 aa20.14■□□□□ 0.81
CDC42SE2-202ENST00000395246 CCER2I3L3R5 266 aa20.14■□□□□ 0.81
CDC42SE2-202ENST00000395246 MIER1Q8N108 512 aa20.14■□□□□ 0.81
CDC42SE2-202ENST00000395246 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
CDC42SE2-202ENST00000395246 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
CDC42SE2-202ENST00000395246 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
CDC42SE2-202ENST00000395246 SBNO2Q9Y2G9 1366 aa20.1■□□□□ 0.81
CDC42SE2-202ENST00000395246 ERVK-7P63135 1459 aa20.09■□□□□ 0.81
CDC42SE2-202ENST00000395246 ARHGEF28Q8N1W1 1705 aaKnown RBP20.09■□□□□ 0.81
CDC42SE2-202ENST00000395246 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
CDC42SE2-202ENST00000395246 USP32Q8NFA0 1604 aa20.08■□□□□ 0.8
CDC42SE2-202ENST00000395246 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.8
CDC42SE2-202ENST00000395246 SCAF11Q99590 1463 aaKnown RBP20.08■□□□□ 0.8
CDC42SE2-202ENST00000395246 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
CDC42SE2-202ENST00000395246 KTN1Q86UP2 1357 aaKnown RBP20.06■□□□□ 0.8
CDC42SE2-202ENST00000395246 KIF3BO15066 747 aa20.03■□□□□ 0.8
CDC42SE2-202ENST00000395246 C11orf95C9JLR9 678 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms