RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 MYO5CQ9NQX4 1742 aa22.78■■□□□ 1.24
PRDM5-202ENST00000394435 ST20-MTHFSA0A0A6YYL1 179 aa22.78■■□□□ 1.24
PRDM5-202ENST00000394435 UNC13BO14795 1591 aa22.77■■□□□ 1.23
PRDM5-202ENST00000394435 ROCK2O75116 1388 aaKnown RBP22.75■■□□□ 1.23
PRDM5-202ENST00000394435 CCDC144AA2RUR9 1427 aa22.75■■□□□ 1.23
PRDM5-202ENST00000394435 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
PRDM5-202ENST00000394435 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
PRDM5-202ENST00000394435 PLXNC1O60486 1568 aa22.72■■□□□ 1.23
PRDM5-202ENST00000394435 PLA2R1Q13018 1463 aa22.72■■□□□ 1.23
PRDM5-202ENST00000394435 PRAG1Q86YV5 1406 aa22.7■■□□□ 1.22
PRDM5-202ENST00000394435 ZCCHC11Q5TAX3 1644 aaKnown RBP22.69■■□□□ 1.22
PRDM5-202ENST00000394435 TRPM1Q7Z4N2 1603 aa22.69■■□□□ 1.22
PRDM5-202ENST00000394435 IQGAP3Q86VI3 1631 aa22.68■■□□□ 1.22
PRDM5-202ENST00000394435 RBM19Q9Y4C8 960 aaKnown RBP22.67■■□□□ 1.22
PRDM5-202ENST00000394435 PLCH2O75038 1416 aa22.67■■□□□ 1.22
PRDM5-202ENST00000394435 DUOX2Q9NRD8 1548 aa22.67■■□□□ 1.22
PRDM5-202ENST00000394435 ERICH6BQ5W0A0 696 aa22.67■■□□□ 1.22
PRDM5-202ENST00000394435 A2MP01023 1474 aa22.65■■□□□ 1.22
PRDM5-202ENST00000394435 NBPF1Q3BBV0 1214 aa22.65■■□□□ 1.22
PRDM5-202ENST00000394435 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.22
PRDM5-202ENST00000394435 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.21
PRDM5-202ENST00000394435 TMC1Q8TDI8 760 aa22.64■■□□□ 1.21
PRDM5-202ENST00000394435 PPP4R2Q9NY27 417 aa22.64■■□□□ 1.21
PRDM5-202ENST00000394435 E9PCH4 1651 aa22.63■■□□□ 1.21
PRDM5-202ENST00000394435 PNISRQ8TF01 805 aaKnown RBP22.63■■□□□ 1.21
PRDM5-202ENST00000394435 ERBINQ96RT1 1412 aa22.61■■□□□ 1.21
PRDM5-202ENST00000394435 UHRF1BP1LA0JNW5 1464 aa22.61■■□□□ 1.21
PRDM5-202ENST00000394435 SENP3-EIF4A1A0A087X0R7 540 aa22.6■■□□□ 1.21
PRDM5-202ENST00000394435 TRAPPC8Q9Y2L5 1435 aa22.6■■□□□ 1.21
PRDM5-202ENST00000394435 MAGI2Q86UL8 1455 aa22.6■■□□□ 1.21
PRDM5-202ENST00000394435 ABCC1P33527 1531 aa22.6■■□□□ 1.21
PRDM5-202ENST00000394435 SMG6Q86US8 1419 aaKnown RBP22.59■■□□□ 1.21
PRDM5-202ENST00000394435 GPRASP1Q5JY77 1395 aa22.58■■□□□ 1.2
PRDM5-202ENST00000394435 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
PRDM5-202ENST00000394435 RALBP1Q15311 655 aa22.57■■□□□ 1.2
PRDM5-202ENST00000394435 ATP10AO60312 1499 aa22.55■■□□□ 1.2
PRDM5-202ENST00000394435 NUDCQ9Y266 331 aa22.55■■□□□ 1.2
PRDM5-202ENST00000394435 KTN1Q86UP2 1357 aaKnown RBP22.54■■□□□ 1.2
PRDM5-202ENST00000394435 BRD4O60885 1362 aaPredicted RBP22.54■■□□□ 1.2
PRDM5-202ENST00000394435 PRDM15P57071 1507 aaPredicted RBP22.53■■□□□ 1.2
PRDM5-202ENST00000394435 LAMC1P11047 1609 aa22.53■■□□□ 1.2
PRDM5-202ENST00000394435 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
PRDM5-202ENST00000394435 EIF2AK4Q9P2K8 1649 aaKnown RBP22.52■■□□□ 1.2
PRDM5-202ENST00000394435 LRPPRCP42704 1394 aaKnown RBP22.51■■□□□ 1.19
PRDM5-202ENST00000394435 AFAP1Q8N556 730 aa22.51■■□□□ 1.19
PRDM5-202ENST00000394435 SPAG9O60271 1321 aaKnown RBP22.51■■□□□ 1.19
PRDM5-202ENST00000394435 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
PRDM5-202ENST00000394435 TESK2Q96S53 571 aa22.5■■□□□ 1.19
PRDM5-202ENST00000394435 COL17A1Q9UMD9 1497 aaPredicted RBP22.5■■□□□ 1.19
PRDM5-202ENST00000394435 PER1O15534 1290 aaPredicted RBP22.47■■□□□ 1.19
PRDM5-202ENST00000394435 PARD3Q8TEW0 1356 aa22.47■■□□□ 1.19
PRDM5-202ENST00000394435 ANP32EQ9BTT0 268 aa22.47■■□□□ 1.19
PRDM5-202ENST00000394435 ZFYVE16Q7Z3T8 1539 aa22.46■■□□□ 1.19
PRDM5-202ENST00000394435 RTEL1-TNFRSF6BF6WH68 1400 aa22.45■■□□□ 1.18
PRDM5-202ENST00000394435 NLRP13Q86W25 1043 aa22.44■■□□□ 1.18
PRDM5-202ENST00000394435 ARAP3Q8WWN8 1544 aa22.44■■□□□ 1.18
PRDM5-202ENST00000394435 RNF123Q5XPI4 1314 aa22.44■■□□□ 1.18
PRDM5-202ENST00000394435 RNF17Q9BXT8 1623 aaKnown RBP22.42■■□□□ 1.18
PRDM5-202ENST00000394435 TMF1P82094 1093 aa22.42■■□□□ 1.18
PRDM5-202ENST00000394435 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
PRDM5-202ENST00000394435 PANK3Q9H999 370 aa22.41■■□□□ 1.18
PRDM5-202ENST00000394435 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
PRDM5-202ENST00000394435 MADDQ8WXG6 1647 aa22.39■■□□□ 1.17
PRDM5-202ENST00000394435 TRPM2O94759 1503 aa22.39■■□□□ 1.17
PRDM5-202ENST00000394435 SPHKAPQ2M3C7 1700 aa22.38■■□□□ 1.17
PRDM5-202ENST00000394435 FANCAO15360 1455 aa22.38■■□□□ 1.17
PRDM5-202ENST00000394435 DEPDC5O75140 1603 aa22.37■■□□□ 1.17
PRDM5-202ENST00000394435 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
PRDM5-202ENST00000394435 ABCA9Q8IUA7 1624 aa22.36■■□□□ 1.17
PRDM5-202ENST00000394435 CEP152O94986 1710 aa22.36■■□□□ 1.17
PRDM5-202ENST00000394435 CLTCL1P53675 1640 aa22.36■■□□□ 1.17
PRDM5-202ENST00000394435 ATP7AQ04656 1500 aa22.36■■□□□ 1.17
PRDM5-202ENST00000394435 MYT1LQ9UL68 1186 aa22.36■■□□□ 1.17
PRDM5-202ENST00000394435 WASHC2CQ9Y4E1 1318 aa22.36■■□□□ 1.17
PRDM5-202ENST00000394435 PTPRTO14522 1441 aa22.35■■□□□ 1.17
PRDM5-202ENST00000394435 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
PRDM5-202ENST00000394435 TET3O43151 1660 aa22.34■■□□□ 1.17
PRDM5-202ENST00000394435 KIF3BO15066 747 aa22.33■■□□□ 1.16
PRDM5-202ENST00000394435 IQGAP1P46940 1657 aa22.32■■□□□ 1.16
PRDM5-202ENST00000394435 MSH5O43196 834 aa22.32■■□□□ 1.16
PRDM5-202ENST00000394435 SCAPERQ9BY12 1400 aa22.32■■□□□ 1.16
PRDM5-202ENST00000394435 KANK1Q14678 1352 aa22.32■■□□□ 1.16
PRDM5-202ENST00000394435 FANCIQ9NVI1 1328 aa22.32■■□□□ 1.16
PRDM5-202ENST00000394435 ADGRL1O94910 1474 aa22.31■■□□□ 1.16
PRDM5-202ENST00000394435 CCDC136Q96JN2 1154 aa22.3■■□□□ 1.16
PRDM5-202ENST00000394435 VWDEQ8N2E2 1590 aa22.29■■□□□ 1.16
PRDM5-202ENST00000394435 SCAF11Q99590 1463 aaKnown RBP22.27■■□□□ 1.15
PRDM5-202ENST00000394435 ASXL2Q76L83 1435 aa22.26■■□□□ 1.15
PRDM5-202ENST00000394435 STAC3Q96MF2 364 aa22.25■■□□□ 1.15
PRDM5-202ENST00000394435 PDE3BQ13370 1112 aa22.24■■□□□ 1.15
PRDM5-202ENST00000394435 RRP1P56182 461 aaKnown RBP22.24■■□□□ 1.15
PRDM5-202ENST00000394435 RCAN3Q9UKA8 241 aa22.24■■□□□ 1.15
PRDM5-202ENST00000394435 MROH1Q8NDA8 1641 aa22.24■■□□□ 1.15
PRDM5-202ENST00000394435 BLMP54132 1417 aaPredicted RBP22.24■■□□□ 1.15
PRDM5-202ENST00000394435 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
PRDM5-202ENST00000394435 KNSTRNQ9Y448 316 aa22.22■■□□□ 1.15
PRDM5-202ENST00000394435 UGGT1Q9NYU2 1555 aa22.22■■□□□ 1.15
PRDM5-202ENST00000394435 INSRP06213 1382 aa22.2■■□□□ 1.14
PRDM5-202ENST00000394435 CDCA8Q53HL2 280 aa22.2■■□□□ 1.14
PRDM5-202ENST00000394435 SYNMO15061 1565 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms