RNA–Protein interactions for RNA: ENST00000393125.6

GRIA4-202, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best) BASIC

Gene GRIA4, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-202ENST00000393125 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
GRIA4-202ENST00000393125 SMG6Q86US8 1419 aaKnown RBP17.54■□□□□ 0.4
GRIA4-202ENST00000393125 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
GRIA4-202ENST00000393125 UHRF1BP1Q6BDS2 1440 aa17.53■□□□□ 0.4
GRIA4-202ENST00000393125 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
GRIA4-202ENST00000393125 PANK3Q9H999 370 aa17.52■□□□□ 0.4
GRIA4-202ENST00000393125 SYCP2Q9BX26 1530 aa17.52■□□□□ 0.39
GRIA4-202ENST00000393125 FAM135AQ9P2D6 1515 aa17.52■□□□□ 0.39
GRIA4-202ENST00000393125 RALBP1Q15311 655 aa17.52■□□□□ 0.39
GRIA4-202ENST00000393125 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
GRIA4-202ENST00000393125 FANCIQ9NVI1 1328 aa17.51■□□□□ 0.39
GRIA4-202ENST00000393125 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
GRIA4-202ENST00000393125 RSPH4AQ5TD94 716 aa17.5■□□□□ 0.39
GRIA4-202ENST00000393125 SAMD9LQ8IVG5 1584 aa17.5■□□□□ 0.39
GRIA4-202ENST00000393125 KTN1Q86UP2 1357 aaKnown RBP17.49■□□□□ 0.39
GRIA4-202ENST00000393125 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
GRIA4-202ENST00000393125 AFAP1Q8N556 730 aa17.49■□□□□ 0.39
GRIA4-202ENST00000393125 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
GRIA4-202ENST00000393125 PLIN1O60240 522 aa17.48■□□□□ 0.39
GRIA4-202ENST00000393125 EXOC6Q8TAG9 804 aa17.48■□□□□ 0.39
GRIA4-202ENST00000393125 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
GRIA4-202ENST00000393125 PRAG1Q86YV5 1406 aa17.46■□□□□ 0.39
GRIA4-202ENST00000393125 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
GRIA4-202ENST00000393125 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
GRIA4-202ENST00000393125 PLA2R1Q13018 1463 aa17.45■□□□□ 0.38
GRIA4-202ENST00000393125 ARHGEF12Q9NZN5 1544 aa17.45■□□□□ 0.38
GRIA4-202ENST00000393125 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
GRIA4-202ENST00000393125 ERCC6L2Q5T890 1561 aa17.44■□□□□ 0.38
GRIA4-202ENST00000393125 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
GRIA4-202ENST00000393125 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
GRIA4-202ENST00000393125 TESK2Q96S53 571 aa17.44■□□□□ 0.38
GRIA4-202ENST00000393125 TMF1P82094 1093 aa17.43■□□□□ 0.38
GRIA4-202ENST00000393125 NBR1Q14596 966 aa17.43■□□□□ 0.38
GRIA4-202ENST00000393125 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
GRIA4-202ENST00000393125 TTC37Q6PGP7 1564 aa17.43■□□□□ 0.38
GRIA4-202ENST00000393125 RRP1P56182 461 aaKnown RBP17.42■□□□□ 0.38
GRIA4-202ENST00000393125 A2MP01023 1474 aa17.42■□□□□ 0.38
GRIA4-202ENST00000393125 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.38
GRIA4-202ENST00000393125 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
GRIA4-202ENST00000393125 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
GRIA4-202ENST00000393125 KDM5DQ9BY66 1539 aa17.4■□□□□ 0.38
GRIA4-202ENST00000393125 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
GRIA4-202ENST00000393125 LRPPRCP42704 1394 aaKnown RBP17.4■□□□□ 0.38
GRIA4-202ENST00000393125 RNF123Q5XPI4 1314 aa17.39■□□□□ 0.37
GRIA4-202ENST00000393125 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
GRIA4-202ENST00000393125 PREX2Q70Z35 1606 aa17.37■□□□□ 0.37
GRIA4-202ENST00000393125 KNSTRNQ9Y448 316 aa17.37■□□□□ 0.37
GRIA4-202ENST00000393125 SENP3Q9H4L4 574 aaPredicted RBP17.37■□□□□ 0.37
GRIA4-202ENST00000393125 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
GRIA4-202ENST00000393125 PARD3Q8TEW0 1356 aa17.36■□□□□ 0.37
GRIA4-202ENST00000393125 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
GRIA4-202ENST00000393125 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
GRIA4-202ENST00000393125 CHD1O14646 1710 aa17.35■□□□□ 0.37
GRIA4-202ENST00000393125 KIF3BO15066 747 aa17.34■□□□□ 0.37
GRIA4-202ENST00000393125 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
GRIA4-202ENST00000393125 NOP58Q9Y2X3 529 aaKnown RBP17.34■□□□□ 0.37
GRIA4-202ENST00000393125 CHGAP10645 457 aaKnown RBP17.33■□□□□ 0.37
GRIA4-202ENST00000393125 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
GRIA4-202ENST00000393125 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
GRIA4-202ENST00000393125 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
GRIA4-202ENST00000393125 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
GRIA4-202ENST00000393125 CRBNQ96SW2 442 aa17.29■□□□□ 0.36
GRIA4-202ENST00000393125 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
GRIA4-202ENST00000393125 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
GRIA4-202ENST00000393125 PLCH2O75038 1416 aa17.28■□□□□ 0.36
GRIA4-202ENST00000393125 PPP2R1AP30153 589 aa17.28■□□□□ 0.36
GRIA4-202ENST00000393125 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
GRIA4-202ENST00000393125 ABCC2Q92887 1545 aa17.27■□□□□ 0.36
GRIA4-202ENST00000393125 PDE3BQ13370 1112 aa17.27■□□□□ 0.35
GRIA4-202ENST00000393125 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.35
GRIA4-202ENST00000393125 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
GRIA4-202ENST00000393125 BCL11AQ9H165 835 aa17.26■□□□□ 0.35
GRIA4-202ENST00000393125 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
GRIA4-202ENST00000393125 MYO5CQ9NQX4 1742 aa17.25■□□□□ 0.35
GRIA4-202ENST00000393125 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
GRIA4-202ENST00000393125 UNC13BO14795 1591 aa17.23■□□□□ 0.35
GRIA4-202ENST00000393125 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
GRIA4-202ENST00000393125 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
GRIA4-202ENST00000393125 E9PCH4 1651 aa17.22■□□□□ 0.35
GRIA4-202ENST00000393125 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
GRIA4-202ENST00000393125 PDE4AP27815 886 aa17.22■□□□□ 0.35
GRIA4-202ENST00000393125 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
GRIA4-202ENST00000393125 PRDM15P57071 1507 aaPredicted RBP17.21■□□□□ 0.35
GRIA4-202ENST00000393125 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
GRIA4-202ENST00000393125 IQGAP3Q86VI3 1631 aa17.2■□□□□ 0.34
GRIA4-202ENST00000393125 ADGRF5Q8IZF2 1346 aa17.2■□□□□ 0.34
GRIA4-202ENST00000393125 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
GRIA4-202ENST00000393125 APAF1O14727 1248 aa17.19■□□□□ 0.34
GRIA4-202ENST00000393125 GGT6Q6P531 493 aa17.19■□□□□ 0.34
GRIA4-202ENST00000393125 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
GRIA4-202ENST00000393125 PLEKHH1Q9ULM0 1364 aa17.18■□□□□ 0.34
GRIA4-202ENST00000393125 CDCA8Q53HL2 280 aa17.18■□□□□ 0.34
GRIA4-202ENST00000393125 LAS1LQ9Y4W2 734 aaKnown RBP17.18■□□□□ 0.34
GRIA4-202ENST00000393125 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
GRIA4-202ENST00000393125 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
GRIA4-202ENST00000393125 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
GRIA4-202ENST00000393125 KANK1Q14678 1352 aa17.17■□□□□ 0.34
GRIA4-202ENST00000393125 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
GRIA4-202ENST00000393125 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
GRIA4-202ENST00000393125 PLXNC1O60486 1568 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms