RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 ATP6V1DQ9Y5K8 247 aa4.93□□□□□ -1.62
UBR3-202ENST00000392632 DHX16O60231 1041 aaKnown RBP4.93□□□□□ -1.62
UBR3-202ENST00000392632 PHF14O94880 888 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 TRIM29Q14134 588 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 PPP4R2Q9NY27 417 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 RB1CC1Q8TDY2 1594 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 ATF3P18847 181 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 ODF2Q5BJF6 829 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 PMFBP1Q8TBY8 1022 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 NAP1L5Q96NT1 182 aaPredicted RBP4.92□□□□□ -1.62
UBR3-202ENST00000392632 HOOK1Q9UJC3 728 aaKnown RBP4.92□□□□□ -1.62
UBR3-202ENST00000392632 KIF3BO15066 747 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 CDR1P51861 262 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 TRDNQ13061 729 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 WRNQ14191 1432 aaPredicted RBP eCLIP4.92□□□□□ -1.62
UBR3-202ENST00000392632 KTN1Q86UP2 1357 aaKnown RBP4.92□□□□□ -1.62
UBR3-202ENST00000392632 TRIM6-TRIM34B2RNG4 842 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 RUFY2Q8WXA3 655 aa4.92□□□□□ -1.62
UBR3-202ENST00000392632 GOLGA3Q08378 1498 aa4.91□□□□□ -1.62
UBR3-202ENST00000392632 PDS5BQ9NTI5 1447 aa4.91□□□□□ -1.62
UBR3-202ENST00000392632 APBB1O00213 710 aa4.91□□□□□ -1.62
UBR3-202ENST00000392632 PES1O00541 588 aaKnown RBP4.91□□□□□ -1.62
UBR3-202ENST00000392632 VGFO15240 615 aaPredicted RBP4.91□□□□□ -1.62
UBR3-202ENST00000392632 RAD21O60216 631 aa4.91□□□□□ -1.62
UBR3-202ENST00000392632 BAZ1BQ9UIG0 1483 aaKnown RBP4.91□□□□□ -1.62
UBR3-202ENST00000392632 CREBRFQ8IUR6 639 aa4.91□□□□□ -1.62
UBR3-202ENST00000392632 FAM184AQ8NB25 1140 aa4.91□□□□□ -1.62
UBR3-202ENST00000392632 ERICH2A1L162 156 aa4.91□□□□□ -1.62
UBR3-202ENST00000392632 CT47A1Q5JQC4 288 aaPredicted RBP4.91□□□□□ -1.62
UBR3-202ENST00000392632 ANKRD30AQ9BXX3 1397 aa4.9□□□□□ -1.62
UBR3-202ENST00000392632 ST18O60284 1047 aa4.9□□□□□ -1.62
UBR3-202ENST00000392632 GPS2Q13227 327 aa4.9□□□□□ -1.62
UBR3-202ENST00000392632 RALBP1Q15311 655 aa4.9□□□□□ -1.62
UBR3-202ENST00000392632 ITPRIPQ8IWB1 547 aa4.9□□□□□ -1.62
UBR3-202ENST00000392632 RAPGEF4Q8WZA2 1011 aa4.9□□□□□ -1.63
UBR3-202ENST00000392632 LTV1Q96GA3 475 aaPredicted RBP4.9□□□□□ -1.63
UBR3-202ENST00000392632 COG3Q96JB2 828 aa4.9□□□□□ -1.63
UBR3-202ENST00000392632 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.9□□□□□ -1.63
UBR3-202ENST00000392632 H3BQV1 296 aa4.9□□□□□ -1.63
UBR3-202ENST00000392632 IFFO2Q5TF58 517 aa4.9□□□□□ -1.63
UBR3-202ENST00000392632 SLC4A10Q6U841 1118 aa4.9□□□□□ -1.63
UBR3-202ENST00000392632 RRP12Q5JTH9 1297 aaKnown RBP4.89□□□□□ -1.63
UBR3-202ENST00000392632 FBXW7Q969H0 707 aa4.89□□□□□ -1.63
UBR3-202ENST00000392632 UACAQ9BZF9 1416 aa4.89□□□□□ -1.63
UBR3-202ENST00000392632 CPLX1O14810 134 aa4.89□□□□□ -1.63
UBR3-202ENST00000392632 IRX6P78412 446 aaPredicted RBP4.89□□□□□ -1.63
UBR3-202ENST00000392632 PSME1Q06323 249 aa4.89□□□□□ -1.63
UBR3-202ENST00000392632 SYTL4Q96C24 671 aaPredicted RBP4.89□□□□□ -1.63
UBR3-202ENST00000392632 CCDC173Q0VFZ6 552 aa4.89□□□□□ -1.63
UBR3-202ENST00000392632 SAFBQ15424 915 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBR3-202ENST00000392632 HSP90AB4PQ58FF6 505 aa4.89□□□□□ -1.63
UBR3-202ENST00000392632 DNAI2Q9GZS0 605 aa4.89□□□□□ -1.63
UBR3-202ENST00000392632 ZKSCAN1P17029 563 aaPredicted RBP4.89□□□□□ -1.63
UBR3-202ENST00000392632 TNNT3P45378 269 aaPredicted RBP4.89□□□□□ -1.63
UBR3-202ENST00000392632 SETQ01105 290 aaPredicted RBP4.89□□□□□ -1.63
UBR3-202ENST00000392632 OSCARQ8IYS5 282 aa4.89□□□□□ -1.63
UBR3-202ENST00000392632 SUPT16HQ9Y5B9 1047 aaKnown RBP4.89□□□□□ -1.63
UBR3-202ENST00000392632 RNF20Q5VTR2 975 aa4.88□□□□□ -1.63
UBR3-202ENST00000392632 HIRIP3Q9BW71 556 aaPredicted RBP4.88□□□□□ -1.63
UBR3-202ENST00000392632 XBP1P17861 261 aa4.88□□□□□ -1.63
UBR3-202ENST00000392632 PKD2Q13563 968 aa4.88□□□□□ -1.63
UBR3-202ENST00000392632 C9orf78Q9NZ63 289 aaPredicted RBP4.88□□□□□ -1.63
UBR3-202ENST00000392632 DCAF1Q9Y4B6 1507 aa4.88□□□□□ -1.63
UBR3-202ENST00000392632 TRIM21P19474 475 aaKnown RBP4.88□□□□□ -1.63
UBR3-202ENST00000392632 BECN2A8MW95 431 aa4.88□□□□□ -1.63
UBR3-202ENST00000392632 TMEM132AQ24JP5 1023 aa4.88□□□□□ -1.63
UBR3-202ENST00000392632 BRMS1Q9HCU9 246 aa4.88□□□□□ -1.63
UBR3-202ENST00000392632 PHLDB1Q86UU1 1377 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 GOLGA6L19H0YKK7 550 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 APPP05067 770 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 NGEFQ8N5V2 710 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 OFD1O75665 1012 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 SLC3A2P08195 630 aaKnown RBP4.87□□□□□ -1.63
UBR3-202ENST00000392632 PCMTD1Q96MG8 357 aaPredicted RBP4.87□□□□□ -1.63
UBR3-202ENST00000392632 DIAPH3Q9NSV4 1193 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 CEP164Q9UPV0 1460 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 CARMIL1Q5VZK9 1371 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 MYO6Q9UM54 1294 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 DESP17661 470 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 ZRSR2Q15696 482 aaKnown RBP4.87□□□□□ -1.63
UBR3-202ENST00000392632 NUP155O75694 1391 aa4.87□□□□□ -1.63
UBR3-202ENST00000392632 IKQ13123 557 aaPredicted RBP4.86□□□□□ -1.63
UBR3-202ENST00000392632 ZNF710Q8N1W2 664 aa4.86□□□□□ -1.63
UBR3-202ENST00000392632 MFAP1P55081 439 aaKnown RBP4.86□□□□□ -1.63
UBR3-202ENST00000392632 G3BP1Q13283 466 aaKnown RBP eCLIP4.86□□□□□ -1.63
UBR3-202ENST00000392632 STAC3Q96MF2 364 aa4.86□□□□□ -1.63
UBR3-202ENST00000392632 EVC2Q86UK5 1308 aa4.86□□□□□ -1.63
UBR3-202ENST00000392632 PDE3BQ13370 1112 aa4.86□□□□□ -1.63
UBR3-202ENST00000392632 SART3Q15020 963 aaKnown RBP4.86□□□□□ -1.63
UBR3-202ENST00000392632 CYB5RLQ6IPT4 315 aa4.86□□□□□ -1.63
UBR3-202ENST00000392632 ROCK2O75116 1388 aaKnown RBP4.86□□□□□ -1.63
UBR3-202ENST00000392632 GNL3LQ9NVN8 582 aaKnown RBP4.85□□□□□ -1.63
UBR3-202ENST00000392632 IFIT2P09913 472 aaKnown RBP4.85□□□□□ -1.63
UBR3-202ENST00000392632 RALYLQ86SE5 291 aaKnown RBP4.85□□□□□ -1.63
UBR3-202ENST00000392632 ZFYVE27Q5T4F4 411 aa4.85□□□□□ -1.63
UBR3-202ENST00000392632 ROCK1Q13464 1354 aa4.85□□□□□ -1.63
UBR3-202ENST00000392632 NFXL1Q6ZNB6 911 aa4.85□□□□□ -1.63
UBR3-202ENST00000392632 PPP1R1BQ9UD71 204 aaPredicted RBP4.85□□□□□ -1.63
UBR3-202ENST00000392632 TBC1D2BQ9UPU7 963 aa4.85□□□□□ -1.63
UBR3-202ENST00000392632 REC8O95072 547 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms