RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 ARHGAP5Q13017 1502 aa22.87■■□□□ 1.25
TFRC-202ENST00000392396 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
TFRC-202ENST00000392396 FRAT2O75474 233 aaPredicted RBP22.86■■□□□ 1.25
TFRC-202ENST00000392396 CGNL1Q0VF96 1302 aa22.86■■□□□ 1.25
TFRC-202ENST00000392396 PRDM2Q13029 1718 aa22.86■■□□□ 1.25
TFRC-202ENST00000392396 DDRGK1Q96HY6 314 aa22.86■■□□□ 1.25
TFRC-202ENST00000392396 AFAP1Q8N556 730 aa22.86■■□□□ 1.25
TFRC-202ENST00000392396 SYTL4Q96C24 671 aaPredicted RBP22.86■■□□□ 1.25
TFRC-202ENST00000392396 MCCP23508 829 aa22.85■■□□□ 1.25
TFRC-202ENST00000392396 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
TFRC-202ENST00000392396 GPRASP1Q5JY77 1395 aa22.83■■□□□ 1.24
TFRC-202ENST00000392396 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.24
TFRC-202ENST00000392396 RAPGEF4Q8WZA2 1011 aa22.81■■□□□ 1.24
TFRC-202ENST00000392396 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
TFRC-202ENST00000392396 GPATCH3Q96I76 525 aa22.8■■□□□ 1.24
TFRC-202ENST00000392396 KIAA1211Q6ZU35 1233 aa22.79■■□□□ 1.24
TFRC-202ENST00000392396 PLEKHH2Q8IVE3 1493 aa22.79■■□□□ 1.24
TFRC-202ENST00000392396 KLHL34Q8N239 644 aa22.79■■□□□ 1.24
TFRC-202ENST00000392396 HMMRO75330 724 aa22.78■■□□□ 1.24
TFRC-202ENST00000392396 WASHC2AQ641Q2 1341 aa22.78■■□□□ 1.24
TFRC-202ENST00000392396 ANP32EQ9BTT0 268 aa22.76■■□□□ 1.23
TFRC-202ENST00000392396 RGS3P49796 1198 aa22.76■■□□□ 1.23
TFRC-202ENST00000392396 CUX1P39880 1505 aa22.75■■□□□ 1.23
TFRC-202ENST00000392396 RUSC2Q8N2Y8 1516 aa22.73■■□□□ 1.23
TFRC-202ENST00000392396 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
TFRC-202ENST00000392396 CENPJQ9HC77 1338 aaPredicted RBP22.72■■□□□ 1.23
TFRC-202ENST00000392396 ESCO1Q5FWF5 840 aa22.71■■□□□ 1.23
TFRC-202ENST00000392396 NLRP13Q86W25 1043 aa22.71■■□□□ 1.23
TFRC-202ENST00000392396 APBB1O00213 710 aa22.71■■□□□ 1.23
TFRC-202ENST00000392396 NEXNQ0ZGT2 675 aa22.71■■□□□ 1.23
TFRC-202ENST00000392396 SLC4A10Q6U841 1118 aa22.71■■□□□ 1.23
TFRC-202ENST00000392396 SLC52A1Q9NWF4 448 aa22.7■■□□□ 1.22
TFRC-202ENST00000392396 ST20-MTHFSA0A0A6YYL1 179 aa22.7■■□□□ 1.22
TFRC-202ENST00000392396 ITPRIPQ8IWB1 547 aa22.7■■□□□ 1.22
TFRC-202ENST00000392396 SUPT16HQ9Y5B9 1047 aaKnown RBP22.7■■□□□ 1.22
TFRC-202ENST00000392396 CCER2I3L3R5 266 aa22.7■■□□□ 1.22
TFRC-202ENST00000392396 DMRT2Q9Y5R5 561 aa22.7■■□□□ 1.22
TFRC-202ENST00000392396 MIA2Q96PC5 1412 aa22.7■■□□□ 1.22
TFRC-202ENST00000392396 PHLDB1Q86UU1 1377 aa22.69■■□□□ 1.22
TFRC-202ENST00000392396 CLSTN1O94985 981 aa22.69■■□□□ 1.22
TFRC-202ENST00000392396 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
TFRC-202ENST00000392396 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
TFRC-202ENST00000392396 SMC4Q9NTJ3 1288 aa22.69■■□□□ 1.22
TFRC-202ENST00000392396 RAPGEF3O95398 923 aa22.68■■□□□ 1.22
TFRC-202ENST00000392396 ANKRD50Q9ULJ7 1429 aa22.68■■□□□ 1.22
TFRC-202ENST00000392396 GNL2Q13823 731 aaKnown RBP22.68■■□□□ 1.22
TFRC-202ENST00000392396 ZNF644Q9H582 1327 aaPredicted RBP22.68■■□□□ 1.22
TFRC-202ENST00000392396 HMGB2P26583 209 aaKnown RBP22.68■■□□□ 1.22
TFRC-202ENST00000392396 SCAPERQ9BY12 1400 aa22.67■■□□□ 1.22
TFRC-202ENST00000392396 PIP4K2BP78356 416 aa22.67■■□□□ 1.22
TFRC-202ENST00000392396 NLRP6P59044 892 aa22.67■■□□□ 1.22
TFRC-202ENST00000392396 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
TFRC-202ENST00000392396 NUTM2BA6NNL0 878 aaPredicted RBP22.64■■□□□ 1.22
TFRC-202ENST00000392396 NUTM2EB1AL46 878 aaPredicted RBP22.64■■□□□ 1.22
TFRC-202ENST00000392396 NUTM2AQ8IVF1 878 aaPredicted RBP22.64■■□□□ 1.22
TFRC-202ENST00000392396 GOLGA6L4A6NEF3 574 aa22.64■■□□□ 1.21
TFRC-202ENST00000392396 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.21
TFRC-202ENST00000392396 PANK3Q9H999 370 aa22.64■■□□□ 1.21
TFRC-202ENST00000392396 FYCO1Q9BQS8 1478 aa22.63■■□□□ 1.21
TFRC-202ENST00000392396 NOL10Q9BSC4 688 aaKnown RBP22.63■■□□□ 1.21
TFRC-202ENST00000392396 RWDD1Q9H446 243 aaPredicted RBP22.63■■□□□ 1.21
TFRC-202ENST00000392396 DIAPH1O60610 1272 aaKnown RBP22.61■■□□□ 1.21
TFRC-202ENST00000392396 DDX58O95786 925 aaKnown RBP22.61■■□□□ 1.21
TFRC-202ENST00000392396 HSP90AB1P08238 724 aaKnown RBP22.61■■□□□ 1.21
TFRC-202ENST00000392396 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
TFRC-202ENST00000392396 ABTB2Q8N961 1025 aa22.59■■□□□ 1.21
TFRC-202ENST00000392396 PPP4R2Q9NY27 417 aa22.58■■□□□ 1.21
TFRC-202ENST00000392396 RRBP1Q9P2E9 1410 aaKnown RBP22.58■■□□□ 1.21
TFRC-202ENST00000392396 KIAA0586Q9BVV6 1533 aa22.58■■□□□ 1.21
TFRC-202ENST00000392396 TRIM34Q9BYJ4 488 aa22.58■■□□□ 1.21
TFRC-202ENST00000392396 CD109Q6YHK3 1445 aa22.57■■□□□ 1.2
TFRC-202ENST00000392396 TPRNQ4KMQ1 711 aa22.57■■□□□ 1.2
TFRC-202ENST00000392396 USP35Q9P2H5 1018 aa22.56■■□□□ 1.2
TFRC-202ENST00000392396 NGEFQ8N5V2 710 aa22.56■■□□□ 1.2
TFRC-202ENST00000392396 AMOTL1Q8IY63 956 aa22.55■■□□□ 1.2
TFRC-202ENST00000392396 CCDC146Q8IYE0 955 aa22.55■■□□□ 1.2
TFRC-202ENST00000392396 STRN4Q9NRL3 753 aa22.55■■□□□ 1.2
TFRC-202ENST00000392396 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
TFRC-202ENST00000392396 NUTM2GQ5VZR2 741 aa22.54■■□□□ 1.2
TFRC-202ENST00000392396 LRRFIP1Q32MZ4 808 aaKnown RBP22.53■■□□□ 1.2
TFRC-202ENST00000392396 EIF2S2P20042 333 aaKnown RBP22.53■■□□□ 1.2
TFRC-202ENST00000392396 TOMM22Q9NS69 142 aa22.53■■□□□ 1.2
TFRC-202ENST00000392396 RBM33Q96EV2 1170 aaKnown RBP22.52■■□□□ 1.2
TFRC-202ENST00000392396 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
TFRC-202ENST00000392396 HSP90B1P14625 803 aaKnown RBP22.52■■□□□ 1.2
TFRC-202ENST00000392396 GOLGA6L6A8MZA4 724 aa22.51■■□□□ 1.19
TFRC-202ENST00000392396 VPS37DQ86XT2 251 aa22.51■■□□□ 1.19
TFRC-202ENST00000392396 EFCAB5A4FU69 1503 aa22.51■■□□□ 1.19
TFRC-202ENST00000392396 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
TFRC-202ENST00000392396 TMEM132EQ6IEE7 984 aa22.51■■□□□ 1.19
TFRC-202ENST00000392396 CTDP1Q9Y5B0 961 aaPredicted RBP22.51■■□□□ 1.19
TFRC-202ENST00000392396 USP47Q96K76 1375 aa22.5■■□□□ 1.19
TFRC-202ENST00000392396 C9orf78Q9NZ63 289 aaPredicted RBP22.5■■□□□ 1.19
TFRC-202ENST00000392396 RCAN3Q9UKA8 241 aa22.49■■□□□ 1.19
TFRC-202ENST00000392396 NRDCO43847 1150 aa22.49■■□□□ 1.19
TFRC-202ENST00000392396 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
TFRC-202ENST00000392396 HSCBQ8IWL3 235 aa22.49■■□□□ 1.19
TFRC-202ENST00000392396 MYBBP1AQ9BQG0 1328 aaKnown RBP22.48■■□□□ 1.19
TFRC-202ENST00000392396 TRIM6-TRIM34B2RNG4 842 aa22.48■■□□□ 1.19
TFRC-202ENST00000392396 PDE3BQ13370 1112 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms