RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 TMEM132EQ6IEE7 984 aa21.51■■□□□ 1.03
SNX9-201ENST00000392185 DAPK1P53355 1430 aa21.51■■□□□ 1.03
SNX9-201ENST00000392185 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
SNX9-201ENST00000392185 KIF7Q2M1P5 1343 aa21.51■■□□□ 1.03
SNX9-201ENST00000392185 MYH16Q9H6N6 1097 aa21.48■■□□□ 1.03
SNX9-201ENST00000392185 TERF2IPQ9NYB0 399 aa21.48■■□□□ 1.03
SNX9-201ENST00000392185 CFAP70Q5T0N1 1121 aa21.48■■□□□ 1.03
SNX9-201ENST00000392185 RGS3P49796 1198 aa21.47■■□□□ 1.03
SNX9-201ENST00000392185 WASHC2AQ641Q2 1341 aa21.47■■□□□ 1.03
SNX9-201ENST00000392185 HSP90AA1P07900 732 aaKnown RBP21.46■■□□□ 1.03
SNX9-201ENST00000392185 SUPT6HQ7KZ85 1726 aaKnown RBP21.45■■□□□ 1.02
SNX9-201ENST00000392185 ARXQ96QS3 562 aa21.44■■□□□ 1.02
SNX9-201ENST00000392185 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
SNX9-201ENST00000392185 NGDNQ8NEJ9 315 aaKnown RBP21.42■■□□□ 1.02
SNX9-201ENST00000392185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.41■■□□□ 1.022e-6■■■□□ 15.3
SNX9-201ENST00000392185 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
SNX9-201ENST00000392185 MYBBP1AQ9BQG0 1328 aaKnown RBP21.4■■□□□ 1.02
SNX9-201ENST00000392185 KIAA1107Q9UPP5 1409 aa21.4■■□□□ 1.02
SNX9-201ENST00000392185 RRP7AQ9Y3A4 280 aaKnown RBP21.39■■□□□ 1.01
SNX9-201ENST00000392185 PNNQ9H307 717 aaKnown RBP21.39■■□□□ 1.01
SNX9-201ENST00000392185 ABCC5O15440 1437 aa21.38■■□□□ 1.01
SNX9-201ENST00000392185 EVC2Q86UK5 1308 aa21.36■■□□□ 1.01
SNX9-201ENST00000392185 NBR1Q14596 966 aa21.36■■□□□ 1.01
SNX9-201ENST00000392185 CENPJQ9HC77 1338 aaPredicted RBP21.36■■□□□ 1.01
SNX9-201ENST00000392185 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
SNX9-201ENST00000392185 LTV1Q96GA3 475 aaPredicted RBP21.32■■□□□ 1
SNX9-201ENST00000392185 CAMSAP2Q08AD1 1489 aa21.32■■□□□ 1
SNX9-201ENST00000392185 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
SNX9-201ENST00000392185 PLEKHH2Q8IVE3 1493 aa21.31■■□□□ 1
SNX9-201ENST00000392185 GOLGA2Q08379 1002 aa21.31■■□□□ 1
SNX9-201ENST00000392185 PTPN23Q9H3S7 1636 aa21.29■■□□□ 1
SNX9-201ENST00000392185 RTF1Q92541 710 aaKnown RBP21.29■■□□□ 1
SNX9-201ENST00000392185 CABP2Q9NPB3 220 aa21.29■■□□□ 1
SNX9-201ENST00000392185 ROCK1Q13464 1354 aa21.29■■□□□ 1
SNX9-201ENST00000392185 WDR97A6NE52 1622 aa21.28■■□□□ 1
SNX9-201ENST00000392185 NCOA1Q15788 1441 aa21.28■■□□□ 1
SNX9-201ENST00000392185 CLUAP1Q96AJ1 413 aa21.27■■□□□ 1
SNX9-201ENST00000392185 CGNL1Q0VF96 1302 aa21.27■■□□□ 1
SNX9-201ENST00000392185 KIF21AQ7Z4S6 1674 aa21.27■□□□□ 0.99
SNX9-201ENST00000392185 APAF1O14727 1248 aa21.26■□□□□ 0.99
SNX9-201ENST00000392185 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
SNX9-201ENST00000392185 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
SNX9-201ENST00000392185 STAC3Q96MF2 364 aa21.26■□□□□ 0.99
SNX9-201ENST00000392185 CD109Q6YHK3 1445 aa21.25■□□□□ 0.99
SNX9-201ENST00000392185 AMPHP49418 695 aa21.25■□□□□ 0.99
SNX9-201ENST00000392185 ATP10BO94823 1461 aa21.24■□□□□ 0.99
SNX9-201ENST00000392185 GGNBP2Q9H3C7 697 aa21.23■□□□□ 0.99
SNX9-201ENST00000392185 CSB-PGBD3P0DP91 1061 aa21.23■□□□□ 0.99
SNX9-201ENST00000392185 CNTLNQ9NXG0 1405 aa21.23■□□□□ 0.99
SNX9-201ENST00000392185 ANKRD30BQ9BXX2 1392 aa21.22■□□□□ 0.99
SNX9-201ENST00000392185 NUP153P49790 1475 aaKnown RBP21.22■□□□□ 0.99
SNX9-201ENST00000392185 GPATCH8Q9UKJ3 1502 aaKnown RBP21.21■□□□□ 0.99
SNX9-201ENST00000392185 PLIN1O60240 522 aa21.21■□□□□ 0.99
SNX9-201ENST00000392185 BCL2L13Q9BXK5 485 aa21.21■□□□□ 0.99
SNX9-201ENST00000392185 AKNAQ7Z591 1439 aa21.2■□□□□ 0.98
SNX9-201ENST00000392185 MS4A1P11836 297 aa21.2■□□□□ 0.98
SNX9-201ENST00000392185 ELL2O00472 640 aaPredicted RBP21.19■□□□□ 0.98
SNX9-201ENST00000392185 SLC12A5Q9H2X9 1139 aa21.19■□□□□ 0.98
SNX9-201ENST00000392185 COG3Q96JB2 828 aa21.19■□□□□ 0.98
SNX9-201ENST00000392185 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
SNX9-201ENST00000392185 PDE3BQ13370 1112 aa21.17■□□□□ 0.98
SNX9-201ENST00000392185 CCDC184Q52MB2 194 aa21.17■□□□□ 0.98
SNX9-201ENST00000392185 ZBED9Q6R2W3 1325 aa21.17■□□□□ 0.98
SNX9-201ENST00000392185 TXNDC2Q86VQ3 553 aa21.17■□□□□ 0.98
SNX9-201ENST00000392185 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.16■□□□□ 0.98
SNX9-201ENST00000392185 SMC4Q9NTJ3 1288 aa21.16■□□□□ 0.98
SNX9-201ENST00000392185 KIF14Q15058 1648 aa21.16■□□□□ 0.98
SNX9-201ENST00000392185 PRAM1Q96QH2 718 aa21.16■□□□□ 0.98
SNX9-201ENST00000392185 APBB1O00213 710 aa21.16■□□□□ 0.98
SNX9-201ENST00000392185 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
SNX9-201ENST00000392185 ITPRIPQ8IWB1 547 aa21.14■□□□□ 0.97
SNX9-201ENST00000392185 SLC52A1Q9NWF4 448 aa21.14■□□□□ 0.97
SNX9-201ENST00000392185 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
SNX9-201ENST00000392185 SLC26A8Q96RN1 970 aa21.12■□□□□ 0.97
SNX9-201ENST00000392185 IPO8O15397 1037 aaKnown RBP21.11■□□□□ 0.97
SNX9-201ENST00000392185 ADAMTS8Q9UP79 889 aa21.11■□□□□ 0.97
SNX9-201ENST00000392185 ERBINQ96RT1 1412 aa21.1■□□□□ 0.97
SNX9-201ENST00000392185 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
SNX9-201ENST00000392185 NUTM2GQ5VZR2 741 aa21.1■□□□□ 0.97
SNX9-201ENST00000392185 MTHFSP49914 203 aa21.09■□□□□ 0.97
SNX9-201ENST00000392185 FBXO31Q5XUX0 539 aaPredicted RBP21.09■□□□□ 0.97
SNX9-201ENST00000392185 RAPGEF6Q8TEU7 1601 aa21.09■□□□□ 0.97
SNX9-201ENST00000392185 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
SNX9-201ENST00000392185 OS9Q13438 667 aaPredicted RBP21.08■□□□□ 0.97
SNX9-201ENST00000392185 FANCAO15360 1455 aa21.08■□□□□ 0.96
SNX9-201ENST00000392185 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
SNX9-201ENST00000392185 CHMP4BQ9H444 224 aaKnown RBP21.07■□□□□ 0.96
SNX9-201ENST00000392185 UGGT2Q9NYU1 1516 aa21.07■□□□□ 0.96
SNX9-201ENST00000392185 RBM19Q9Y4C8 960 aaKnown RBP21.07■□□□□ 0.96
SNX9-201ENST00000392185 HMOX1P09601 288 aa21.06■□□□□ 0.96
SNX9-201ENST00000392185 ERICH6BQ5W0A0 696 aa21.06■□□□□ 0.96
SNX9-201ENST00000392185 ZNF330Q9Y3S2 320 aaPredicted RBP21.06■□□□□ 0.96
SNX9-201ENST00000392185 TCERG1O14776 1098 aaKnown RBP21.05■□□□□ 0.96
SNX9-201ENST00000392185 EXOC6Q8TAG9 804 aa21.05■□□□□ 0.96
SNX9-201ENST00000392185 CTTNBP2Q8WZ74 1663 aa21.04■□□□□ 0.96
SNX9-201ENST00000392185 IDI1Q13907 227 aa21.04■□□□□ 0.96
SNX9-201ENST00000392185 BECN1Q14457 450 aa21.04■□□□□ 0.96
SNX9-201ENST00000392185 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
SNX9-201ENST00000392185 PMFBP1Q8TBY8 1022 aa21.03■□□□□ 0.96
SNX9-201ENST00000392185 CDCA7LQ96GN5 454 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms