RNA–Protein interactions for RNA: ENST00000391828.7

NLRP3-206, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 3,853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-206ENST00000391828 RRP7AQ9Y3A4 280 aaKnown RBP10.85□□□□□ -0.67
NLRP3-206ENST00000391828 GRIN2BQ13224 1484 aa10.85□□□□□ -0.67
NLRP3-206ENST00000391828 MS4A1P11836 297 aa10.84□□□□□ -0.67
NLRP3-206ENST00000391828 NUTM2DQ5VT03 806 aaPredicted RBP10.84□□□□□ -0.67
NLRP3-206ENST00000391828 PLPPR3Q6T4P5 718 aa10.84□□□□□ -0.67
NLRP3-206ENST00000391828 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
NLRP3-206ENST00000391828 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
NLRP3-206ENST00000391828 KIAA1107Q9UPP5 1409 aa10.84□□□□□ -0.67
NLRP3-206ENST00000391828 SPAG9O60271 1321 aaKnown RBP10.84□□□□□ -0.67
NLRP3-206ENST00000391828 ARID4BQ4LE39 1312 aaPredicted RBP10.84□□□□□ -0.67
NLRP3-206ENST00000391828 CFAP43Q8NDM7 1665 aa10.84□□□□□ -0.67
NLRP3-206ENST00000391828 ABCC5O15440 1437 aa10.84□□□□□ -0.67
NLRP3-206ENST00000391828 PTPN23Q9H3S7 1636 aa10.83□□□□□ -0.68
NLRP3-206ENST00000391828 STK26Q9P289 416 aa10.83□□□□□ -0.68
NLRP3-206ENST00000391828 GLIPR1L2Q4G1C9 344 aa10.83□□□□□ -0.68
NLRP3-206ENST00000391828 URB2Q14146 1524 aaKnown RBP10.82□□□□□ -0.68
NLRP3-206ENST00000391828 SUPT6HQ7KZ85 1726 aaKnown RBP10.82□□□□□ -0.68
NLRP3-206ENST00000391828 SKAP1Q86WV1 359 aa10.82□□□□□ -0.68
NLRP3-206ENST00000391828 BCL2L13Q9BXK5 485 aa10.82□□□□□ -0.68
NLRP3-206ENST00000391828 SLKQ9H2G2 1235 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-206ENST00000391828 TRAK1Q9UPV9 953 aa10.82□□□□□ -0.68
NLRP3-206ENST00000391828 BRD4O60885 1362 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-206ENST00000391828 U2AF1L5P0DN76 240 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-206ENST00000391828 U2AF1Q01081 240 aaKnown RBP eCLIP10.82□□□□□ -0.68
NLRP3-206ENST00000391828 GSE1Q14687 1217 aa10.81□□□□□ -0.68
NLRP3-206ENST00000391828 TROQ12816 1431 aaPredicted RBP10.81□□□□□ -0.68
NLRP3-206ENST00000391828 KANK1Q14678 1352 aa10.81□□□□□ -0.68
NLRP3-206ENST00000391828 MAPK8IP3Q9UPT6 1336 aa10.8□□□□□ -0.68
NLRP3-206ENST00000391828 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
NLRP3-206ENST00000391828 POGKQ9P215 609 aa10.8□□□□□ -0.68
NLRP3-206ENST00000391828 ROCK1Q13464 1354 aa10.79□□□□□ -0.68
NLRP3-206ENST00000391828 ESF1Q9H501 851 aaKnown RBP10.79□□□□□ -0.68
NLRP3-206ENST00000391828 RNF123Q5XPI4 1314 aa10.79□□□□□ -0.68
NLRP3-206ENST00000391828 AFAP1Q8N556 730 aa10.79□□□□□ -0.68
NLRP3-206ENST00000391828 COG6Q9Y2V7 657 aa10.79□□□□□ -0.68
NLRP3-206ENST00000391828 LAMC3Q9Y6N6 1575 aa10.78□□□□□ -0.68
NLRP3-206ENST00000391828 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
NLRP3-206ENST00000391828 C9orf84Q5VXU9 1444 aa10.78□□□□□ -0.68
NLRP3-206ENST00000391828 RPRD2Q5VT52 1461 aaKnown RBP10.78□□□□□ -0.68
NLRP3-206ENST00000391828 CENPQQ7L2Z9 268 aaPredicted RBP10.77□□□□□ -0.69
NLRP3-206ENST00000391828 PLB1Q6P1J6 1458 aa10.77□□□□□ -0.69
NLRP3-206ENST00000391828 CENPJQ9HC77 1338 aaPredicted RBP10.76□□□□□ -0.69
NLRP3-206ENST00000391828 HECW1Q76N89 1606 aa10.76□□□□□ -0.69
NLRP3-206ENST00000391828 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
NLRP3-206ENST00000391828 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
NLRP3-206ENST00000391828 PPP2R1AP30153 589 aa10.75□□□□□ -0.69
NLRP3-206ENST00000391828 CUL7Q14999 1698 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 CFAP70Q5T0N1 1121 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 IQGAP2Q13576 1575 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 KIAA0586Q9BVV6 1533 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 THOC2Q8NI27 1593 aaKnown RBP10.74□□□□□ -0.69
NLRP3-206ENST00000391828 WASHC2CQ9Y4E1 1318 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 MYH16Q9H6N6 1097 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 BRPF3Q9ULD4 1205 aa10.74□□□□□ -0.69
NLRP3-206ENST00000391828 NFKBIBQ15653 356 aa10.73□□□□□ -0.69
NLRP3-206ENST00000391828 C20orf194Q5TEA3 1177 aa10.73□□□□□ -0.69
NLRP3-206ENST00000391828 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
NLRP3-206ENST00000391828 GZF1Q9H116 711 aaPredicted RBP10.73□□□□□ -0.69
NLRP3-206ENST00000391828 E9PSI1 815 aa10.72□□□□□ -0.69
NLRP3-206ENST00000391828 ITPRIPQ8IWB1 547 aa10.72□□□□□ -0.69
NLRP3-206ENST00000391828 PANK1Q8TE04 598 aa10.72□□□□□ -0.69
NLRP3-206ENST00000391828 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
NLRP3-206ENST00000391828 UGGT2Q9NYU1 1516 aa10.72□□□□□ -0.69
NLRP3-206ENST00000391828 BCAR3O75815 825 aa10.72□□□□□ -0.69
NLRP3-206ENST00000391828 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
NLRP3-206ENST00000391828 DNAJC5Q9H3Z4 198 aa10.71□□□□□ -0.69
NLRP3-206ENST00000391828 RWDD1Q9H446 243 aaPredicted RBP10.71□□□□□ -0.69
NLRP3-206ENST00000391828 SMC4Q9NTJ3 1288 aa10.71□□□□□ -0.69
NLRP3-206ENST00000391828 ANP32BQ92688 251 aaKnown RBP10.71□□□□□ -0.69
NLRP3-206ENST00000391828 TMEM132EQ6IEE7 984 aa10.71□□□□□ -0.7
NLRP3-206ENST00000391828 CAMSAP2Q08AD1 1489 aa10.71□□□□□ -0.7
NLRP3-206ENST00000391828 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
NLRP3-206ENST00000391828 MFAP1P55081 439 aaKnown RBP10.7□□□□□ -0.7
NLRP3-206ENST00000391828 PKNOX2Q96KN3 472 aa10.7□□□□□ -0.7
NLRP3-206ENST00000391828 SOX12O15370 315 aa10.7□□□□□ -0.7
NLRP3-206ENST00000391828 MLECQ14165 292 aa10.7□□□□□ -0.7
NLRP3-206ENST00000391828 IFT140Q96RY7 1462 aa10.69□□□□□ -0.7
NLRP3-206ENST00000391828 KDM5BQ9UGL1 1544 aa10.69□□□□□ -0.7
NLRP3-206ENST00000391828 PMFBP1Q8TBY8 1022 aa10.68□□□□□ -0.7
NLRP3-206ENST00000391828 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
NLRP3-206ENST00000391828 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
NLRP3-206ENST00000391828 ELL2O00472 640 aaPredicted RBP10.67□□□□□ -0.7
NLRP3-206ENST00000391828 CGNL1Q0VF96 1302 aa10.67□□□□□ -0.7
NLRP3-206ENST00000391828 APBB1O00213 710 aa10.67□□□□□ -0.7
NLRP3-206ENST00000391828 HSP90AB1P08238 724 aaKnown RBP10.67□□□□□ -0.7
NLRP3-206ENST00000391828 SLC12A5Q9H2X9 1139 aa10.67□□□□□ -0.7
NLRP3-206ENST00000391828 AEBP2Q6ZN18 517 aaPredicted RBP10.66□□□□□ -0.7
NLRP3-206ENST00000391828 DHX29Q7Z478 1369 aaKnown RBP10.66□□□□□ -0.7
NLRP3-206ENST00000391828 GPATCH8Q9UKJ3 1502 aaKnown RBP10.66□□□□□ -0.7
NLRP3-206ENST00000391828 HSCBQ8IWL3 235 aa10.66□□□□□ -0.7
NLRP3-206ENST00000391828 SYNJ2O15056 1496 aa10.66□□□□□ -0.7
NLRP3-206ENST00000391828 ERBINQ96RT1 1412 aa10.65□□□□□ -0.7
NLRP3-206ENST00000391828 MTHFSP49914 203 aa10.65□□□□□ -0.7
NLRP3-206ENST00000391828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
NLRP3-206ENST00000391828 ARHGAP5Q13017 1502 aa10.65□□□□□ -0.7
NLRP3-206ENST00000391828 TCP11L2Q8N4U5 519 aa10.65□□□□□ -0.7
NLRP3-206ENST00000391828 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
NLRP3-206ENST00000391828 FAM43AQ8N2R8 423 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms