RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 CCDC141Q6ZP82 1450 aa15.37■□□□□ 0.05
CCDC149-202ENST00000389609 NUP155O75694 1391 aa15.37■□□□□ 0.05
CCDC149-202ENST00000389609 PREX2Q70Z35 1606 aa15.37■□□□□ 0.05
CCDC149-202ENST00000389609 UNC13BO14795 1591 aa15.36■□□□□ 0.05
CCDC149-202ENST00000389609 GPRASP1Q5JY77 1395 aa15.36■□□□□ 0.05
CCDC149-202ENST00000389609 TSPY4P0CV99 314 aa15.35■□□□□ 0.05
CCDC149-202ENST00000389609 TSPY10P0CW01 314 aa15.35■□□□□ 0.05
CCDC149-202ENST00000389609 PNISRQ8TF01 805 aaKnown RBP15.35■□□□□ 0.05
CCDC149-202ENST00000389609 WASHC2CQ9Y4E1 1318 aa15.35■□□□□ 0.05
CCDC149-202ENST00000389609 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
CCDC149-202ENST00000389609 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.04
CCDC149-202ENST00000389609 TRPM1Q7Z4N2 1603 aa15.33■□□□□ 0.04
CCDC149-202ENST00000389609 EIF2AK4Q9P2K8 1649 aaKnown RBP15.33■□□□□ 0.04
CCDC149-202ENST00000389609 ATP10AO60312 1499 aa15.32■□□□□ 0.04
CCDC149-202ENST00000389609 PLEKHH2Q8IVE3 1493 aa15.32■□□□□ 0.04
CCDC149-202ENST00000389609 PLXNC1O60486 1568 aa15.32■□□□□ 0.04
CCDC149-202ENST00000389609 ZNF326Q5BKZ1 582 aaKnown RBP15.32■□□□□ 0.04
CCDC149-202ENST00000389609 CARD11Q9BXL7 1154 aa15.32■□□□□ 0.04
CCDC149-202ENST00000389609 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
CCDC149-202ENST00000389609 PDE3BQ13370 1112 aa15.31■□□□□ 0.04
CCDC149-202ENST00000389609 SAMD9LQ8IVG5 1584 aa15.3■□□□□ 0.04
CCDC149-202ENST00000389609 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
CCDC149-202ENST00000389609 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
CCDC149-202ENST00000389609 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC149-202ENST00000389609 TMC1Q8TDI8 760 aa15.29■□□□□ 0.04
CCDC149-202ENST00000389609 PARD3Q8TEW0 1356 aa15.29■□□□□ 0.04
CCDC149-202ENST00000389609 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
CCDC149-202ENST00000389609 NOP58Q9Y2X3 529 aaKnown RBP15.29■□□□□ 0.04
CCDC149-202ENST00000389609 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
CCDC149-202ENST00000389609 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
CCDC149-202ENST00000389609 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.04
CCDC149-202ENST00000389609 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
CCDC149-202ENST00000389609 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
CCDC149-202ENST00000389609 CCDC144AA2RUR9 1427 aa15.26■□□□□ 0.03
CCDC149-202ENST00000389609 NLRP13Q86W25 1043 aa15.26■□□□□ 0.03
CCDC149-202ENST00000389609 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
CCDC149-202ENST00000389609 NBR1Q14596 966 aa15.24■□□□□ 0.03
CCDC149-202ENST00000389609 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
CCDC149-202ENST00000389609 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
CCDC149-202ENST00000389609 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
CCDC149-202ENST00000389609 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
CCDC149-202ENST00000389609 DUOX2Q9NRD8 1548 aa15.22■□□□□ 0.03
CCDC149-202ENST00000389609 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
CCDC149-202ENST00000389609 RNF17Q9BXT8 1623 aaKnown RBP15.22■□□□□ 0.03
CCDC149-202ENST00000389609 STAC3Q96MF2 364 aa15.21■□□□□ 0.03
CCDC149-202ENST00000389609 CHD1O14646 1710 aa15.2■□□□□ 0.02
CCDC149-202ENST00000389609 BLMP54132 1417 aaPredicted RBP15.2■□□□□ 0.02
CCDC149-202ENST00000389609 A2MP01023 1474 aa15.2■□□□□ 0.02
CCDC149-202ENST00000389609 DCAF11Q8TEB1 546 aa15.19■□□□□ 0.02
CCDC149-202ENST00000389609 UBE2Q2Q8WVN8 375 aa15.19■□□□□ 0.02
CCDC149-202ENST00000389609 PLA2R1Q13018 1463 aa15.19■□□□□ 0.02
CCDC149-202ENST00000389609 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
CCDC149-202ENST00000389609 MYO5CQ9NQX4 1742 aa15.18■□□□□ 0.02
CCDC149-202ENST00000389609 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
CCDC149-202ENST00000389609 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
CCDC149-202ENST00000389609 KDM2AQ9Y2K7 1162 aa15.17■□□□□ 0.02
CCDC149-202ENST00000389609 PER1O15534 1290 aaPredicted RBP15.17■□□□□ 0.02
CCDC149-202ENST00000389609 ANP32AP39687 249 aaKnown RBP15.17■□□□□ 0.02
CCDC149-202ENST00000389609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCDC149-202ENST00000389609 TTC37Q6PGP7 1564 aa15.16■□□□□ 0.02
CCDC149-202ENST00000389609 NEURL4Q96JN8 1562 aa15.16■□□□□ 0.02
CCDC149-202ENST00000389609 TCERG1O14776 1098 aaKnown RBP15.16■□□□□ 0.02
CCDC149-202ENST00000389609 IL27Q8NEV9 243 aa15.16■□□□□ 0.02
CCDC149-202ENST00000389609 ABCC2Q92887 1545 aa15.16■□□□□ 0.02
CCDC149-202ENST00000389609 MS4A1P11836 297 aa15.16■□□□□ 0.02
CCDC149-202ENST00000389609 ARHGAP5Q13017 1502 aa15.15■□□□□ 0.02
CCDC149-202ENST00000389609 ARAP3Q8WWN8 1544 aa15.15■□□□□ 0.02
CCDC149-202ENST00000389609 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
CCDC149-202ENST00000389609 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
CCDC149-202ENST00000389609 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
CCDC149-202ENST00000389609 TESK2Q96S53 571 aa15.12■□□□□ 0.01
CCDC149-202ENST00000389609 CLASP1Q7Z460 1538 aa15.11■□□□□ 0.01
CCDC149-202ENST00000389609 UHRF1BP1LA0JNW5 1464 aa15.11■□□□□ 0.01
CCDC149-202ENST00000389609 TMF1P82094 1093 aa15.11■□□□□ 0.01
CCDC149-202ENST00000389609 RTEL1-TNFRSF6BF6WH68 1400 aa15.11■□□□□ 0.01
CCDC149-202ENST00000389609 SCAPERQ9BY12 1400 aa15.11■□□□□ 0.01
CCDC149-202ENST00000389609 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
CCDC149-202ENST00000389609 NPC1L1Q9UHC9 1359 aa15.1■□□□□ 0.01
CCDC149-202ENST00000389609 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
CCDC149-202ENST00000389609 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
CCDC149-202ENST00000389609 PLCH2O75038 1416 aa15.09■□□□□ 0.01
CCDC149-202ENST00000389609 SYNMO15061 1565 aa15.09■□□□□ 0.01
CCDC149-202ENST00000389609 TRPM2O94759 1503 aa15.08■□□□□ 0.01
CCDC149-202ENST00000389609 ABCC1P33527 1531 aa15.08■□□□□ 0
CCDC149-202ENST00000389609 KIAA1210Q9ULL0 1709 aa15.08■□□□□ 0
CCDC149-202ENST00000389609 CDCA8Q53HL2 280 aa15.08■□□□□ 0
CCDC149-202ENST00000389609 MADDQ8WXG6 1647 aa15.07■□□□□ 0
CCDC149-202ENST00000389609 DISP3Q9P2K9 1392 aa15.06■□□□□ 0
CCDC149-202ENST00000389609 SPHKAPQ2M3C7 1700 aa15.06■□□□□ 0
CCDC149-202ENST00000389609 PTPRTO14522 1441 aa15.06■□□□□ 0
CCDC149-202ENST00000389609 DEPDC5O75140 1603 aa15.06■□□□□ 0
CCDC149-202ENST00000389609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ 0
CCDC149-202ENST00000389609 NBPF1Q3BBV0 1214 aa15.05■□□□□ -0
CCDC149-202ENST00000389609 CEP152O94986 1710 aa15.04■□□□□ -0
CCDC149-202ENST00000389609 PIK3C2GO75747 1445 aa15.04■□□□□ -0
CCDC149-202ENST00000389609 RGL3Q3MIN7 710 aa15.04■□□□□ -0
CCDC149-202ENST00000389609 RTN4Q9NQC3 1192 aaKnown RBP15.04■□□□□ -0
CCDC149-202ENST00000389609 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
CCDC149-202ENST00000389609 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
CCDC149-202ENST00000389609 WDR7Q9Y4E6 1490 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms