RNA–Protein interactions for RNA: ENST00000384741.1

RNU6-41P-201, Transcript of RNA, U6 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU6-41P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-41P-201ENST00000384741 JPH4Q96JJ6 628 aa5.62□□□□□ -1.51
RNU6-41P-201ENST00000384741 TSR3Q9UJK0 312 aaKnown RBP5.62□□□□□ -1.51
RNU6-41P-201ENST00000384741 WFS1O76024 890 aa5.61□□□□□ -1.51
RNU6-41P-201ENST00000384741 INSM1Q01101 510 aaPredicted RBP5.61□□□□□ -1.51
RNU6-41P-201ENST00000384741 ZDHHC16Q969W1 377 aa5.61□□□□□ -1.51
RNU6-41P-201ENST00000384741 GPHNQ9NQX3 736 aaPredicted RBP5.61□□□□□ -1.51
RNU6-41P-201ENST00000384741 PPP1R37O75864 691 aa5.6□□□□□ -1.51
RNU6-41P-201ENST00000384741 DGAT1O75907 488 aa5.6□□□□□ -1.51
RNU6-41P-201ENST00000384741 PKDCCQ504Y2 493 aa5.6□□□□□ -1.51
RNU6-41P-201ENST00000384741 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.6□□□□□ -1.51
RNU6-41P-201ENST00000384741 HPS5Q9UPZ3 1129 aa5.6□□□□□ -1.51
RNU6-41P-201ENST00000384741 STK24Q9Y6E0 443 aa5.6□□□□□ -1.51
RNU6-41P-201ENST00000384741 COL9A1P20849 921 aa5.58□□□□□ -1.52
RNU6-41P-201ENST00000384741 NFX1Q12986 1120 aaKnown RBP5.58□□□□□ -1.52
RNU6-41P-201ENST00000384741 UPF1Q92900 1129 aaKnown RBP eCLIP5.58□□□□□ -1.52
RNU6-41P-201ENST00000384741 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.57□□□□□ -1.52
RNU6-41P-201ENST00000384741 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
RNU6-41P-201ENST00000384741 ANO8Q9HCE9 1232 aaPredicted RBP5.56□□□□□ -1.52
RNU6-41P-201ENST00000384741 KIAA1468Q9P260 1216 aa5.56□□□□□ -1.52
RNU6-41P-201ENST00000384741 SEPT9Q9UHD8 586 aaPredicted RBP5.56□□□□□ -1.52
RNU6-41P-201ENST00000384741 LRCH3Q96II8 777 aa5.55□□□□□ -1.52
RNU6-41P-201ENST00000384741 MTRQ99707 1265 aa5.55□□□□□ -1.52
RNU6-41P-201ENST00000384741 ST8SIA5O15466 376 aa5.54□□□□□ -1.52
RNU6-41P-201ENST00000384741 IL21Q9HBE4 155 aa5.54□□□□□ -1.52
RNU6-41P-201ENST00000384741 PRR20EP86478 221 aa5.53□□□□□ -1.52
RNU6-41P-201ENST00000384741 PRR20CP86479 221 aa5.53□□□□□ -1.52
RNU6-41P-201ENST00000384741 PRR20DP86480 221 aa5.53□□□□□ -1.52
RNU6-41P-201ENST00000384741 PRR20BP86481 221 aa5.53□□□□□ -1.52
RNU6-41P-201ENST00000384741 PRR20AP86496 221 aa5.53□□□□□ -1.52
RNU6-41P-201ENST00000384741 FAM98CQ17RN3 349 aaKnown RBP5.53□□□□□ -1.52
RNU6-41P-201ENST00000384741 ZNF516Q92618 1163 aa5.52□□□□□ -1.53
RNU6-41P-201ENST00000384741 AAASQ9NRG9 546 aa5.52□□□□□ -1.53
RNU6-41P-201ENST00000384741 STK25O00506 426 aa5.51□□□□□ -1.53
RNU6-41P-201ENST00000384741 ONECUT3O60422 494 aaPredicted RBP5.51□□□□□ -1.53
RNU6-41P-201ENST00000384741 EMID1Q96A84 441 aaPredicted RBP5.51□□□□□ -1.53
RNU6-41P-201ENST00000384741 FAM187AA6NFU0 413 aa5.5□□□□□ -1.53
RNU6-41P-201ENST00000384741 EVI5O60447 810 aa5.49□□□□□ -1.53
RNU6-41P-201ENST00000384741 NKX2-3Q8TAU0 364 aa5.49□□□□□ -1.53
RNU6-41P-201ENST00000384741 TAOK2Q9UL54 1235 aa5.49□□□□□ -1.53
RNU6-41P-201ENST00000384741 PPP4CP60510 307 aa5.48□□□□□ -1.53
RNU6-41P-201ENST00000384741 PCDHGA10Q9Y5H3 936 aa5.47□□□□□ -1.53
RNU6-41P-201ENST00000384741 TRIM6-TRIM34B2RNG4 842 aa5.46□□□□□ -1.54
RNU6-41P-201ENST00000384741 GGCXP38435 758 aa5.46□□□□□ -1.54
RNU6-41P-201ENST00000384741 TMUB1Q9BVT8 246 aa5.46□□□□□ -1.54
RNU6-41P-201ENST00000384741 GMPR2Q9P2T1 348 aaKnown RBP5.46□□□□□ -1.54
RNU6-41P-201ENST00000384741 DACH1Q9UI36 760 aa5.46□□□□□ -1.54
RNU6-41P-201ENST00000384741 SLC19A1P41440 591 aa5.45□□□□□ -1.54
RNU6-41P-201ENST00000384741 SPRYD7Q5W111 196 aa5.45□□□□□ -1.54
RNU6-41P-201ENST00000384741 GDF9O60383 454 aa5.44□□□□□ -1.54
RNU6-41P-201ENST00000384741 LORP23490 312 aaPredicted RBP5.44□□□□□ -1.54
RNU6-41P-201ENST00000384741 ZNF598Q86UK7 904 aaKnown RBP5.44□□□□□ -1.54
RNU6-41P-201ENST00000384741 CRIPAKQ8N1N5 446 aa5.44□□□□□ -1.54
RNU6-41P-201ENST00000384741 FAM181BA6NEQ2 426 aa5.43□□□□□ -1.54
RNU6-41P-201ENST00000384741 C11orf95C9JLR9 678 aaPredicted RBP5.42□□□□□ -1.54
RNU6-41P-201ENST00000384741 TNFRSF10AO00220 468 aa5.42□□□□□ -1.54
RNU6-41P-201ENST00000384741 FBXW7Q969H0 707 aa5.42□□□□□ -1.54
RNU6-41P-201ENST00000384741 PPP1R15BQ5SWA1 713 aa5.41□□□□□ -1.54
RNU6-41P-201ENST00000384741 RNF223E7ERA6 249 aa5.4□□□□□ -1.54
RNU6-41P-201ENST00000384741 TERTO14746 1132 aaKnown RBP5.4□□□□□ -1.54
RNU6-41P-201ENST00000384741 APLP1P51693 650 aa5.4□□□□□ -1.54
RNU6-41P-201ENST00000384741 ZNF697Q5TEC3 545 aa5.4□□□□□ -1.54
RNU6-41P-201ENST00000384741 TYW1BQ6NUM6 668 aa5.4□□□□□ -1.54
RNU6-41P-201ENST00000384741 CRISPLD2Q9H0B8 497 aa5.4□□□□□ -1.54
RNU6-41P-201ENST00000384741 SAMD7Q7Z3H4 446 aa5.39□□□□□ -1.55
RNU6-41P-201ENST00000384741 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
RNU6-41P-201ENST00000384741 C6orf132Q5T0Z8 1188 aa5.38□□□□□ -1.55
RNU6-41P-201ENST00000384741 PHF14O94880 888 aa5.37□□□□□ -1.55
RNU6-41P-201ENST00000384741 AVPP01185 164 aa5.37□□□□□ -1.55
RNU6-41P-201ENST00000384741 LIAT1Q6ZQX7 453 aa5.37□□□□□ -1.55
RNU6-41P-201ENST00000384741 ZSCAN1Q8NBB4 408 aa5.37□□□□□ -1.55
RNU6-41P-201ENST00000384741 TSKSQ9UJT2 592 aa5.36□□□□□ -1.55
RNU6-41P-201ENST00000384741 COPS2P61201 443 aa5.35□□□□□ -1.55
RNU6-41P-201ENST00000384741 XP32Q5T750 250 aa5.35□□□□□ -1.55
RNU6-41P-201ENST00000384741 AXIN1O15169 862 aa5.33□□□□□ -1.56
RNU6-41P-201ENST00000384741 ZPR1O75312 459 aa5.33□□□□□ -1.56
RNU6-41P-201ENST00000384741 KCTD17Q8N5Z5 321 aa5.33□□□□□ -1.56
RNU6-41P-201ENST00000384741 ANKLE1Q8NAG6 615 aa5.33□□□□□ -1.56
RNU6-41P-201ENST00000384741 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
RNU6-41P-201ENST00000384741 SNRPBP14678 240 aaKnown RBP5.32□□□□□ -1.56
RNU6-41P-201ENST00000384741 SMCPP49901 116 aaPredicted RBP5.32□□□□□ -1.56
RNU6-41P-201ENST00000384741 MAP3K9P80192 1104 aa5.32□□□□□ -1.56
RNU6-41P-201ENST00000384741 PACS2Q86VP3 889 aa5.32□□□□□ -1.56
RNU6-41P-201ENST00000384741 PKD2L1Q9P0L9 805 aa5.32□□□□□ -1.56
RNU6-41P-201ENST00000384741 NCKAP5LQ9HCH0 1330 aa5.31□□□□□ -1.56
RNU6-41P-201ENST00000384741 SMAPO00193 183 aa5.31□□□□□ -1.56
RNU6-41P-201ENST00000384741 GMPRP36959 345 aa5.31□□□□□ -1.56
RNU6-41P-201ENST00000384741 GSK3AP49840 483 aa5.31□□□□□ -1.56
RNU6-41P-201ENST00000384741 CTC1Q2NKJ3 1217 aa5.31□□□□□ -1.56
RNU6-41P-201ENST00000384741 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
RNU6-41P-201ENST00000384741 C3orf80F5H4A9 247 aa5.29□□□□□ -1.56
RNU6-41P-201ENST00000384741 PPEF1O14829 653 aaPredicted RBP5.29□□□□□ -1.56
RNU6-41P-201ENST00000384741 LMOD2Q6P5Q4 547 aa5.29□□□□□ -1.56
RNU6-41P-201ENST00000384741 EPAS1Q99814 870 aa5.29□□□□□ -1.56
RNU6-41P-201ENST00000384741 EMILIN3Q9NT22 766 aa5.29□□□□□ -1.56
RNU6-41P-201ENST00000384741 RNF40O75150 1001 aa5.28□□□□□ -1.56
RNU6-41P-201ENST00000384741 TRIM47Q96LD4 638 aa5.28□□□□□ -1.56
RNU6-41P-201ENST00000384741 TOR4AQ9NXH8 423 aa5.28□□□□□ -1.56
RNU6-41P-201ENST00000384741 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
RNU6-41P-201ENST00000384741 KCNMA1Q12791 1236 aa5.27□□□□□ -1.57
RNU6-41P-201ENST00000384741 PLA2G2CQ5R387 149 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms