RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 RNF123Q5XPI4 1314 aa27.44■■□□□ 1.98
CLN5-201ENST00000377453 BCL11AQ9H165 835 aa27.44■■□□□ 1.98
CLN5-201ENST00000377453 MYBBP1AQ9BQG0 1328 aaKnown RBP27.43■■□□□ 1.98
CLN5-201ENST00000377453 ARHGEF12Q9NZN5 1544 aa27.41■■□□□ 1.98
CLN5-201ENST00000377453 PTPRGP23470 1445 aa27.4■■□□□ 1.98
CLN5-201ENST00000377453 CHD1O14646 1710 aa27.4■■□□□ 1.98
CLN5-201ENST00000377453 FAM135AQ9P2D6 1515 aa27.39■■□□□ 1.98
CLN5-201ENST00000377453 PAK3O75914 559 aaPredicted RBP27.39■■□□□ 1.98
CLN5-201ENST00000377453 CC2D1BQ5T0F9 858 aaKnown RBP27.38■■□□□ 1.97
CLN5-201ENST00000377453 SAMD9LQ8IVG5 1584 aa27.38■■□□□ 1.97
CLN5-201ENST00000377453 KDM5DQ9BY66 1539 aa27.38■■□□□ 1.97
CLN5-201ENST00000377453 LRPPRCP42704 1394 aaKnown RBP27.37■■□□□ 1.97
CLN5-201ENST00000377453 CCDC144AA2RUR9 1427 aa27.35■■□□□ 1.97
CLN5-201ENST00000377453 CCDC141Q6ZP82 1450 aa27.35■■□□□ 1.97
CLN5-201ENST00000377453 RALBP1Q15311 655 aa27.34■■□□□ 1.97
CLN5-201ENST00000377453 EXOC6Q8TAG9 804 aa27.34■■□□□ 1.97
CLN5-201ENST00000377453 BRD4O60885 1362 aaPredicted RBP27.34■■□□□ 1.97
CLN5-201ENST00000377453 CDCA7LQ96GN5 454 aa27.34■■□□□ 1.97
CLN5-201ENST00000377453 PRAG1Q86YV5 1406 aa27.34■■□□□ 1.97
CLN5-201ENST00000377453 PLA2R1Q13018 1463 aa27.32■■□□□ 1.96
CLN5-201ENST00000377453 SYCP2Q9BX26 1530 aa27.32■■□□□ 1.96
CLN5-201ENST00000377453 DISP3Q9P2K9 1392 aa27.31■■□□□ 1.96
CLN5-201ENST00000377453 CDC42BPBQ9Y5S2 1711 aa27.3■■□□□ 1.96
CLN5-201ENST00000377453 ARHGEF5Q12774 1597 aa27.29■■□□□ 1.96
CLN5-201ENST00000377453 ERCC6L2Q5T890 1561 aa27.29■■□□□ 1.96
CLN5-201ENST00000377453 RRP1P56182 461 aaKnown RBP27.29■■□□□ 1.96
CLN5-201ENST00000377453 NBR1Q14596 966 aa27.29■■□□□ 1.96
CLN5-201ENST00000377453 KTN1Q86UP2 1357 aaKnown RBP27.28■■□□□ 1.96
CLN5-201ENST00000377453 PER1O15534 1290 aaPredicted RBP27.27■■□□□ 1.96
CLN5-201ENST00000377453 A2MP01023 1474 aa27.27■■□□□ 1.96
CLN5-201ENST00000377453 NLRP13Q86W25 1043 aa27.27■■□□□ 1.96
CLN5-201ENST00000377453 NOP58Q9Y2X3 529 aaKnown RBP27.26■■□□□ 1.95
CLN5-201ENST00000377453 PLEKHH2Q8IVE3 1493 aa27.26■■□□□ 1.95
CLN5-201ENST00000377453 RCAN3Q9UKA8 241 aa27.25■■□□□ 1.95
CLN5-201ENST00000377453 E9PCH4 1651 aa27.25■■□□□ 1.95
CLN5-201ENST00000377453 ARHGAP5Q13017 1502 aa27.25■■□□□ 1.95
CLN5-201ENST00000377453 PLIN1O60240 522 aa27.24■■□□□ 1.95
CLN5-201ENST00000377453 PANK3Q9H999 370 aa27.24■■□□□ 1.95
CLN5-201ENST00000377453 PARD3Q8TEW0 1356 aa27.24■■□□□ 1.95
CLN5-201ENST00000377453 TESK2Q96S53 571 aa27.24■■□□□ 1.95
CLN5-201ENST00000377453 TRPM1Q7Z4N2 1603 aa27.23■■□□□ 1.95
CLN5-201ENST00000377453 TTC37Q6PGP7 1564 aa27.23■■□□□ 1.95
CLN5-201ENST00000377453 SKAP1Q86WV1 359 aa27.22■■□□□ 1.95
CLN5-201ENST00000377453 PREX2Q70Z35 1606 aa27.22■■□□□ 1.95
CLN5-201ENST00000377453 NPM2Q86SE8 214 aaKnown RBP27.18■■□□□ 1.94
CLN5-201ENST00000377453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.16■■□□□ 1.94
CLN5-201ENST00000377453 COL17A1Q9UMD9 1497 aaPredicted RBP27.14■■□□□ 1.94
CLN5-201ENST00000377453 RSPH4AQ5TD94 716 aa27.13■■□□□ 1.93
CLN5-201ENST00000377453 ERBINQ96RT1 1412 aa27.13■■□□□ 1.93
CLN5-201ENST00000377453 ANP32AP39687 249 aaKnown RBP27.12■■□□□ 1.93
CLN5-201ENST00000377453 GPRASP1Q5JY77 1395 aa27.12■■□□□ 1.93
CLN5-201ENST00000377453 IPO9Q96P70 1041 aaKnown RBP27.09■■□□□ 1.93
CLN5-201ENST00000377453 DEKP35659 375 aaKnown RBP27.08■■□□□ 1.93
CLN5-201ENST00000377453 UNC13BO14795 1591 aa27.08■■□□□ 1.92
CLN5-201ENST00000377453 TMF1P82094 1093 aa27.07■■□□□ 1.92
CLN5-201ENST00000377453 PRDM15P57071 1507 aaPredicted RBP27.07■■□□□ 1.92
CLN5-201ENST00000377453 ADAMTS8Q9UP79 889 aa27.05■■□□□ 1.92
CLN5-201ENST00000377453 MYO5CQ9NQX4 1742 aa27.05■■□□□ 1.92
CLN5-201ENST00000377453 CRBNQ96SW2 442 aa27.04■■□□□ 1.92
CLN5-201ENST00000377453 C20orf194Q5TEA3 1177 aa27.04■■□□□ 1.92
CLN5-201ENST00000377453 SHROOM2Q13796 1616 aa27.02■■□□□ 1.92
CLN5-201ENST00000377453 ZBTB47Q9UFB7 747 aaPredicted RBP27.02■■□□□ 1.92
CLN5-201ENST00000377453 PDE3BQ13370 1112 aa27.01■■□□□ 1.91
CLN5-201ENST00000377453 IQGAP3Q86VI3 1631 aa27■■□□□ 1.91
CLN5-201ENST00000377453 AFAP1Q8N556 730 aa27■■□□□ 1.91
CLN5-201ENST00000377453 TRAPPC8Q9Y2L5 1435 aa27■■□□□ 1.91
CLN5-201ENST00000377453 MAST1Q9Y2H9 1570 aa26.99■■□□□ 1.91
CLN5-201ENST00000377453 MAGI2Q86UL8 1455 aa26.99■■□□□ 1.91
CLN5-201ENST00000377453 PDE4AP27815 886 aa26.98■■□□□ 1.91
CLN5-201ENST00000377453 BLMP54132 1417 aaPredicted RBP26.97■■□□□ 1.91
CLN5-201ENST00000377453 DUOX2Q9NRD8 1548 aa26.95■■□□□ 1.9
CLN5-201ENST00000377453 PPP2R1AP30153 589 aa26.94■■□□□ 1.9
CLN5-201ENST00000377453 PLXNC1O60486 1568 aa26.93■■□□□ 1.9
CLN5-201ENST00000377453 KNSTRNQ9Y448 316 aa26.93■■□□□ 1.9
CLN5-201ENST00000377453 PLEKHH1Q9ULM0 1364 aa26.92■■□□□ 1.9
CLN5-201ENST00000377453 ABCC2Q92887 1545 aa26.92■■□□□ 1.9
CLN5-201ENST00000377453 TCERG1O14776 1098 aaKnown RBP26.92■■□□□ 1.9
CLN5-201ENST00000377453 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
CLN5-201ENST00000377453 CLASP1Q7Z460 1538 aa26.92■■□□□ 1.9
CLN5-201ENST00000377453 WDR7Q9Y4E6 1490 aa26.91■■□□□ 1.9
CLN5-201ENST00000377453 CCDC146Q8IYE0 955 aa26.91■■□□□ 1.9
CLN5-201ENST00000377453 WASHC2CQ9Y4E1 1318 aa26.91■■□□□ 1.9
CLN5-201ENST00000377453 LAS1LQ9Y4W2 734 aaKnown RBP26.9■■□□□ 1.9
CLN5-201ENST00000377453 BACH2Q9BYV9 841 aa26.89■■□□□ 1.9
CLN5-201ENST00000377453 AMER1Q5JTC6 1135 aaPredicted RBP26.88■■□□□ 1.89
CLN5-201ENST00000377453 PLCH2O75038 1416 aa26.88■■□□□ 1.89
CLN5-201ENST00000377453 LAMC1P11047 1609 aa26.88■■□□□ 1.89
CLN5-201ENST00000377453 EIF2AK4Q9P2K8 1649 aaKnown RBP26.88■■□□□ 1.89
CLN5-201ENST00000377453 WDR43Q15061 677 aaKnown RBP eCLIP26.88■■□□□ 1.89
CLN5-201ENST00000377453 SPAG9O60271 1321 aaKnown RBP26.87■■□□□ 1.89
CLN5-201ENST00000377453 MYT1LQ9UL68 1186 aa26.86■■□□□ 1.89
CLN5-201ENST00000377453 ATP10AO60312 1499 aa26.86■■□□□ 1.89
CLN5-201ENST00000377453 ZMYM4Q5VZL5 1548 aa26.84■■□□□ 1.89
CLN5-201ENST00000377453 DUSP27Q5VZP5 1158 aa26.83■■□□□ 1.88
CLN5-201ENST00000377453 RNF17Q9BXT8 1623 aaKnown RBP26.82■■□□□ 1.88
CLN5-201ENST00000377453 MADDQ8WXG6 1647 aa26.81■■□□□ 1.88
CLN5-201ENST00000377453 ABCC1P33527 1531 aa26.8■■□□□ 1.88
CLN5-201ENST00000377453 SPINK5Q9NQ38 1064 aaPredicted RBP26.8■■□□□ 1.88
CLN5-201ENST00000377453 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
CLN5-201ENST00000377453 CFAP70Q5T0N1 1121 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms