RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
CRNKL1-201ENST00000377327 ERICH3Q5RHP9 1530 aa11.33□□□□□ -0.59
CRNKL1-201ENST00000377327 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
CRNKL1-201ENST00000377327 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.6
CRNKL1-201ENST00000377327 SMC4Q9NTJ3 1288 aa11.32□□□□□ -0.6
CRNKL1-201ENST00000377327 APAF1O14727 1248 aa11.32□□□□□ -0.6
CRNKL1-201ENST00000377327 POGKQ9P215 609 aa11.32□□□□□ -0.6
CRNKL1-201ENST00000377327 IGF1RP08069 1367 aa11.32□□□□□ -0.6
CRNKL1-201ENST00000377327 NBPF8Q3BBV2 869 aa11.32□□□□□ -0.6
CRNKL1-201ENST00000377327 CSPP1Q1MSJ5 1256 aa11.32□□□□□ -0.6
CRNKL1-201ENST00000377327 C22orf23Q9BZE7 217 aa11.32□□□□□ -0.6
CRNKL1-201ENST00000377327 ESPNB1AK53 854 aa11.31□□□□□ -0.6
CRNKL1-201ENST00000377327 ISY1Q9ULR0 285 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-201ENST00000377327 MCCP23508 829 aa11.31□□□□□ -0.6
CRNKL1-201ENST00000377327 MTERF4Q7Z6M4 381 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-201ENST00000377327 MYOM3Q5VTT5 1437 aa11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 PRXQ9BXM0 1461 aa11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 ZRSR1Q15695 479 aaKnown RBP11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 NGEFQ8N5V2 710 aa11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 EIF3AQ14152 1382 aaKnown RBP11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 BCL2L13Q9BXK5 485 aa11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 R3HCC1Q9Y3T6 440 aaKnown RBP11.3□□□□□ -0.6
CRNKL1-201ENST00000377327 NASPP49321 788 aaPredicted RBP11.29□□□□□ -0.6
CRNKL1-201ENST00000377327 HFM1A2PYH4 1435 aa11.29□□□□□ -0.6
CRNKL1-201ENST00000377327 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 AAMPQ13685 434 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 MCM4P33991 863 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 GRPEL1Q9HAV7 217 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 GOLGA6L6A8MZA4 724 aa11.28□□□□□ -0.6
CRNKL1-201ENST00000377327 NRDCO43847 1150 aa11.27□□□□□ -0.61
CRNKL1-201ENST00000377327 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.61
CRNKL1-201ENST00000377327 ST18O60284 1047 aa11.27□□□□□ -0.61
CRNKL1-201ENST00000377327 PHF14O94880 888 aa11.26□□□□□ -0.61
CRNKL1-201ENST00000377327 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
CRNKL1-201ENST00000377327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.26□□□□□ -0.61
CRNKL1-201ENST00000377327 PANK1Q8TE04 598 aa11.26□□□□□ -0.61
CRNKL1-201ENST00000377327 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
CRNKL1-201ENST00000377327 RRP7AQ9Y3A4 280 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-201ENST00000377327 A0A0U1RQG5 324 aaPredicted RBP11.26□□□□□ -0.61
CRNKL1-201ENST00000377327 RBM10P98175 930 aaKnown RBP11.25□□□□□ -0.61
CRNKL1-201ENST00000377327 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
CRNKL1-201ENST00000377327 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
CRNKL1-201ENST00000377327 MIA2Q96PC5 1412 aa11.25□□□□□ -0.61
CRNKL1-201ENST00000377327 APBB1O00213 710 aa11.24□□□□□ -0.61
CRNKL1-201ENST00000377327 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
CRNKL1-201ENST00000377327 PDE3AQ14432 1141 aa11.23□□□□□ -0.61
CRNKL1-201ENST00000377327 TIAM1Q13009 1591 aa11.23□□□□□ -0.61
CRNKL1-201ENST00000377327 ANKRD45Q5TZF3 282 aa11.23□□□□□ -0.61
CRNKL1-201ENST00000377327 NUCB2P80303 420 aa11.23□□□□□ -0.61
CRNKL1-201ENST00000377327 MAPKBP1O60336 1514 aa11.23□□□□□ -0.61
CRNKL1-201ENST00000377327 CUX1P39880 1505 aa11.23□□□□□ -0.61
CRNKL1-201ENST00000377327 TDRD9Q8NDG6 1382 aaKnown RBP11.22□□□□□ -0.61
CRNKL1-201ENST00000377327 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-201ENST00000377327 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-201ENST00000377327 DZIP1LQ8IYY4 767 aaKnown RBP11.22□□□□□ -0.61
CRNKL1-201ENST00000377327 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-201ENST00000377327 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
CRNKL1-201ENST00000377327 NCOA2Q15596 1464 aa11.21□□□□□ -0.61
CRNKL1-201ENST00000377327 NCOA1Q15788 1441 aa11.21□□□□□ -0.61
CRNKL1-201ENST00000377327 HAP1P54257 671 aaPredicted RBP11.21□□□□□ -0.61
CRNKL1-201ENST00000377327 PDCL3Q9H2J4 239 aa11.21□□□□□ -0.61
CRNKL1-201ENST00000377327 PDZRN3Q9UPQ7 1066 aa11.21□□□□□ -0.61
CRNKL1-201ENST00000377327 ZNF771Q7L3S4 317 aaPredicted RBP11.21□□□□□ -0.62
CRNKL1-201ENST00000377327 CCDC144AA2RUR9 1427 aa11.2□□□□□ -0.62
CRNKL1-201ENST00000377327 MCTP1Q6DN14 999 aa11.2□□□□□ -0.62
CRNKL1-201ENST00000377327 CLCN1P35523 988 aa11.2□□□□□ -0.62
CRNKL1-201ENST00000377327 NAIPQ13075 1403 aa11.2□□□□□ -0.62
CRNKL1-201ENST00000377327 BCAR3O75815 825 aa11.2□□□□□ -0.62
CRNKL1-201ENST00000377327 C20orf194Q5TEA3 1177 aa11.19□□□□□ -0.62
CRNKL1-201ENST00000377327 SENP3Q9H4L4 574 aaPredicted RBP11.19□□□□□ -0.62
CRNKL1-201ENST00000377327 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
CRNKL1-201ENST00000377327 KCNJ4P48050 445 aa11.19□□□□□ -0.62
CRNKL1-201ENST00000377327 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
CRNKL1-201ENST00000377327 ZSCAN30Q86W11 494 aa11.19□□□□□ -0.62
CRNKL1-201ENST00000377327 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
CRNKL1-201ENST00000377327 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
CRNKL1-201ENST00000377327 CAVIN1Q6NZI2 390 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-201ENST00000377327 LNPKQ9C0E8 428 aa11.17□□□□□ -0.62
CRNKL1-201ENST00000377327 NOL8Q76FK4 1167 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-201ENST00000377327 HNRNPMP52272 730 aaKnown RBP eCLIP11.16□□□□□ -0.62
CRNKL1-201ENST00000377327 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
CRNKL1-201ENST00000377327 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
CRNKL1-201ENST00000377327 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
CRNKL1-201ENST00000377327 PPP2R1AP30153 589 aa11.16□□□□□ -0.62
CRNKL1-201ENST00000377327 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
CRNKL1-201ENST00000377327 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-201ENST00000377327 XRCC6P12956 609 aaKnown RBP eCLIP11.15□□□□□ -0.62
CRNKL1-201ENST00000377327 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.62
CRNKL1-201ENST00000377327 FOXD4L6Q3SYB3 417 aaPredicted RBP11.15□□□□□ -0.62
CRNKL1-201ENST00000377327 FOXD4L3Q6VB84 417 aaPredicted RBP11.15□□□□□ -0.62
CRNKL1-201ENST00000377327 RUNDC1Q96C34 613 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms