RNA–Protein interactions for RNA: ENST00000376042.5

CCNB3-204, Transcript of cyclin B3, human

APPRIS P1 TSL 2 BASIC

Gene CCNB3, Length 4,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB3-204	ENST00000376042	CFAP74	Q9C0B2	1584 aa		10.39	□□□□□ -0.75
CCNB3-204	ENST00000376042	ATF3	P18847	181 aa		10.39	□□□□□ -0.75
CCNB3-204	ENST00000376042	DHX57	Q6P158	1386 aa	Known RBP	10.39	□□□□□ -0.75
CCNB3-204	ENST00000376042	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.39	□□□□□ -0.75
CCNB3-204	ENST00000376042	DIEXF	Q68CQ4	756 aa	Known RBP	10.39	□□□□□ -0.75
CCNB3-204	ENST00000376042	ATP10A	O60312	1499 aa		10.38	□□□□□ -0.75
CCNB3-204	ENST00000376042	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
CCNB3-204	ENST00000376042	PTPN23	Q9H3S7	1636 aa		10.37	□□□□□ -0.75
CCNB3-204	ENST00000376042	TERF2IP	Q9NYB0	399 aa		10.37	□□□□□ -0.75
CCNB3-204	ENST00000376042	PROSER2	Q86WR7	435 aa	Predicted RBP	10.36	□□□□□ -0.75
CCNB3-204	ENST00000376042	L3MBTL2	Q969R5	705 aa		10.36	□□□□□ -0.75
CCNB3-204	ENST00000376042	NGDN	Q8NEJ9	315 aa	Known RBP	10.36	□□□□□ -0.75
CCNB3-204	ENST00000376042	RIMBP3C	A6NJZ7	1639 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	RIMBP3B	A6NNM3	1639 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	RIMBP3	Q9UFD9	1639 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	TNR	Q92752	1358 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	PLEKHG5	O94827	1062 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	MAGI2	Q86UL8	1455 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	NCOA1	Q15788	1441 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	ERBIN	Q96RT1	1412 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	DUOX2	Q9NRD8	1548 aa		10.35	□□□□□ -0.75
CCNB3-204	ENST00000376042	ANKRD30B	Q9BXX2	1392 aa		10.34	□□□□□ -0.75
CCNB3-204	ENST00000376042	WDR43	Q15061	677 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
CCNB3-204	ENST00000376042	TRAPPC8	Q9Y2L5	1435 aa		10.34	□□□□□ -0.75
CCNB3-204	ENST00000376042	NUDC	Q9Y266	331 aa		10.34	□□□□□ -0.75
CCNB3-204	ENST00000376042	MAPKBP1	O60336	1514 aa		10.33	□□□□□ -0.76
CCNB3-204	ENST00000376042	NPM2	Q86SE8	214 aa	Known RBP	10.33	□□□□□ -0.76
CCNB3-204	ENST00000376042	SYCP2	Q9BX26	1530 aa		10.33	□□□□□ -0.76
CCNB3-204	ENST00000376042	PAK3	O75914	559 aa	Predicted RBP	10.33	□□□□□ -0.76
CCNB3-204	ENST00000376042	TRAK1	Q9UPV9	953 aa		10.33	□□□□□ -0.76
CCNB3-204	ENST00000376042	EVC2	Q86UK5	1308 aa		10.33	□□□□□ -0.76
CCNB3-204	ENST00000376042	MAGI3	Q5TCQ9	1506 aa		10.32	□□□□□ -0.76
CCNB3-204	ENST00000376042	SHANK2	Q9UPX8	1470 aa		10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042	DDX10	Q13206	875 aa	Known RBP	10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042	YTHDC1	Q96MU7	727 aa	Known RBP	10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042	ERCC6L2	Q5T890	1561 aa		10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042	CEBPA	P49715	358 aa	Predicted RBP	10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042	ZFYVE16	Q7Z3T8	1539 aa		10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042		A0A0G2JS52	829 aa		10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042	MYT1	Q01538	1121 aa		10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042	PNN	Q9H307	717 aa	Known RBP	10.31	□□□□□ -0.76
CCNB3-204	ENST00000376042	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.3	□□□□□ -0.76
CCNB3-204	ENST00000376042	FAM135A	Q9P2D6	1515 aa		10.29	□□□□□ -0.76
CCNB3-204	ENST00000376042	NAIP	Q13075	1403 aa		10.29	□□□□□ -0.76
CCNB3-204	ENST00000376042	TCOF1	Q13428	1488 aa	Known RBP	10.29	□□□□□ -0.76
CCNB3-204	ENST00000376042	SHROOM2	Q13796	1616 aa		10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	PPM1G	O15355	546 aa	Predicted RBP	10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	PSME1	Q06323	249 aa		10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	CFAP43	Q8NDM7	1665 aa		10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	ZMYM3	Q14202	1370 aa		10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	UHRF1BP1	Q6BDS2	1440 aa		10.27	□□□□□ -0.77
CCNB3-204	ENST00000376042	CSB-PGBD3	P0DP91	1061 aa		10.26	□□□□□ -0.77
CCNB3-204	ENST00000376042	MORC1	Q86VD1	984 aa		10.26	□□□□□ -0.77
CCNB3-204	ENST00000376042	ARAP3	Q8WWN8	1544 aa		10.26	□□□□□ -0.77
CCNB3-204	ENST00000376042	IDI1	Q13907	227 aa		10.26	□□□□□ -0.77
CCNB3-204	ENST00000376042	ATP7A	Q04656	1500 aa		10.26	□□□□□ -0.77
CCNB3-204	ENST00000376042	MEX3C	Q5U5Q3	659 aa	Known RBP	10.25	□□□□□ -0.77
CCNB3-204	ENST00000376042	HSPA5	P11021	654 aa	Known RBP	10.25	□□□□□ -0.77
CCNB3-204	ENST00000376042	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.25	□□□□□ -0.77
CCNB3-204	ENST00000376042	SLC26A8	Q96RN1	970 aa		10.24	□□□□□ -0.77
CCNB3-204	ENST00000376042	CCDC9	Q9Y3X0	531 aa	Known RBP	10.24	□□□□□ -0.77
CCNB3-204	ENST00000376042	MLH3	Q9UHC1	1453 aa		10.24	□□□□□ -0.77
CCNB3-204	ENST00000376042	GPRASP1	Q5JY77	1395 aa		10.24	□□□□□ -0.77
CCNB3-204	ENST00000376042	KDM6B	O15054	1643 aa		10.24	□□□□□ -0.77
CCNB3-204	ENST00000376042	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.23	□□□□□ -0.77
CCNB3-204	ENST00000376042	MYO5C	Q9NQX4	1742 aa		10.22	□□□□□ -0.77
CCNB3-204	ENST00000376042	CANX	P27824	592 aa	Known RBP	10.22	□□□□□ -0.77
CCNB3-204	ENST00000376042	MAPK8IP3	Q9UPT6	1336 aa		10.22	□□□□□ -0.77
CCNB3-204	ENST00000376042	NUTM2F	A1L443	756 aa		10.22	□□□□□ -0.77
CCNB3-204	ENST00000376042	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.22	□□□□□ -0.77
CCNB3-204	ENST00000376042	MRS2	Q9HD23	443 aa		10.21	□□□□□ -0.77
CCNB3-204	ENST00000376042	ADCY10	Q96PN6	1610 aa		10.21	□□□□□ -0.78
CCNB3-204	ENST00000376042	TOM1	O60784	492 aa		10.21	□□□□□ -0.78
CCNB3-204	ENST00000376042	CFAP70	Q5T0N1	1121 aa		10.21	□□□□□ -0.78
CCNB3-204	ENST00000376042	ARHGEF5	Q12774	1597 aa		10.2	□□□□□ -0.78
CCNB3-204	ENST00000376042	SOX12	O15370	315 aa		10.19	□□□□□ -0.78
CCNB3-204	ENST00000376042	COG3	Q96JB2	828 aa		10.19	□□□□□ -0.78
CCNB3-204	ENST00000376042	AMPH	P49418	695 aa		10.19	□□□□□ -0.78
CCNB3-204	ENST00000376042	EVA1C	P58658	441 aa		10.19	□□□□□ -0.78
CCNB3-204	ENST00000376042	TMEM132E	Q6IEE7	984 aa		10.19	□□□□□ -0.78
CCNB3-204	ENST00000376042	ST20-MTHFS	A0A0A6YYL1	179 aa		10.18	□□□□□ -0.78
CCNB3-204	ENST00000376042	ADGRL2	O95490	1459 aa		10.18	□□□□□ -0.78
CCNB3-204	ENST00000376042	ESCO1	Q5FWF5	840 aa		10.18	□□□□□ -0.78
CCNB3-204	ENST00000376042	CADPS2	Q86UW7	1296 aa		10.18	□□□□□ -0.78
CCNB3-204	ENST00000376042	GLI2	P10070	1586 aa		10.17	□□□□□ -0.78
CCNB3-204	ENST00000376042	YEATS2	Q9ULM3	1422 aa		10.17	□□□□□ -0.78
CCNB3-204	ENST00000376042	KTN1	Q86UP2	1357 aa	Known RBP	10.17	□□□□□ -0.78
CCNB3-204	ENST00000376042	PRAM1	Q96QH2	718 aa		10.17	□□□□□ -0.78
CCNB3-204	ENST00000376042	ZNF692	Q9BU19	519 aa	Predicted RBP	10.17	□□□□□ -0.78
CCNB3-204	ENST00000376042	CGNL1	Q0VF96	1302 aa		10.17	□□□□□ -0.78
CCNB3-204	ENST00000376042	USP47	Q96K76	1375 aa		10.17	□□□□□ -0.78
CCNB3-204	ENST00000376042	AMOTL2	Q9Y2J4	779 aa		10.16	□□□□□ -0.78
CCNB3-204	ENST00000376042	ABCC1	P33527	1531 aa		10.16	□□□□□ -0.78
CCNB3-204	ENST00000376042	TNNT2	P45379	298 aa	Predicted RBP	10.16	□□□□□ -0.78
CCNB3-204	ENST00000376042	U2SURP	O15042	1029 aa	Known RBP	10.16	□□□□□ -0.78
CCNB3-204	ENST00000376042	CC2D1B	Q5T0F9	858 aa	Known RBP	10.16	□□□□□ -0.78
CCNB3-204	ENST00000376042	CHMP4A	Q9BY43	222 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms