RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 RGL3Q3MIN7 710 aa16.77■□□□□ 0.28
TNFSF13B-201ENST00000375887 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
TNFSF13B-201ENST00000375887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
TNFSF13B-201ENST00000375887 LRPPRCP42704 1394 aaKnown RBP16.75■□□□□ 0.27
TNFSF13B-201ENST00000375887 MYBBP1AQ9BQG0 1328 aaKnown RBP16.73■□□□□ 0.27
TNFSF13B-201ENST00000375887 ARHGEF5Q12774 1597 aa16.73■□□□□ 0.27
TNFSF13B-201ENST00000375887 FAM135AQ9P2D6 1515 aa16.73■□□□□ 0.27
TNFSF13B-201ENST00000375887 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
TNFSF13B-201ENST00000375887 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
TNFSF13B-201ENST00000375887 RALBP1Q15311 655 aa16.72■□□□□ 0.27
TNFSF13B-201ENST00000375887 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
TNFSF13B-201ENST00000375887 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
TNFSF13B-201ENST00000375887 PLA2R1Q13018 1463 aa16.71■□□□□ 0.27
TNFSF13B-201ENST00000375887 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
TNFSF13B-201ENST00000375887 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
TNFSF13B-201ENST00000375887 PER1O15534 1290 aaPredicted RBP16.69■□□□□ 0.26
TNFSF13B-201ENST00000375887 ERICH6Q7L0X2 663 aa16.69■□□□□ 0.26
TNFSF13B-201ENST00000375887 CCDC144AA2RUR9 1427 aa16.68■□□□□ 0.26
TNFSF13B-201ENST00000375887 RSPH4AQ5TD94 716 aa16.67■□□□□ 0.26
TNFSF13B-201ENST00000375887 KTN1Q86UP2 1357 aaKnown RBP16.66■□□□□ 0.26
TNFSF13B-201ENST00000375887 E9PCH4 1651 aa16.66■□□□□ 0.26
TNFSF13B-201ENST00000375887 PARD3Q8TEW0 1356 aa16.65■□□□□ 0.26
TNFSF13B-201ENST00000375887 TESK2Q96S53 571 aa16.65■□□□□ 0.26
TNFSF13B-201ENST00000375887 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
TNFSF13B-201ENST00000375887 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
TNFSF13B-201ENST00000375887 A2MP01023 1474 aa16.65■□□□□ 0.26
TNFSF13B-201ENST00000375887 PREX2Q70Z35 1606 aa16.64■□□□□ 0.25
TNFSF13B-201ENST00000375887 TRPM1Q7Z4N2 1603 aa16.64■□□□□ 0.25
TNFSF13B-201ENST00000375887 DISP3Q9P2K9 1392 aa16.63■□□□□ 0.25
TNFSF13B-201ENST00000375887 PLEKHH2Q8IVE3 1493 aa16.63■□□□□ 0.25
TNFSF13B-201ENST00000375887 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
TNFSF13B-201ENST00000375887 GPRASP1Q5JY77 1395 aa16.63■□□□□ 0.25
TNFSF13B-201ENST00000375887 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
TNFSF13B-201ENST00000375887 CC2D1BQ5T0F9 858 aaKnown RBP16.62■□□□□ 0.25
TNFSF13B-201ENST00000375887 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
TNFSF13B-201ENST00000375887 TTC37Q6PGP7 1564 aa16.61■□□□□ 0.25
TNFSF13B-201ENST00000375887 EXOC6Q8TAG9 804 aa16.61■□□□□ 0.25
TNFSF13B-201ENST00000375887 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
TNFSF13B-201ENST00000375887 RCAN3Q9UKA8 241 aa16.6■□□□□ 0.25
TNFSF13B-201ENST00000375887 PANK3Q9H999 370 aa16.6■□□□□ 0.25
TNFSF13B-201ENST00000375887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
TNFSF13B-201ENST00000375887 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.24
TNFSF13B-201ENST00000375887 COL17A1Q9UMD9 1497 aaPredicted RBP16.58■□□□□ 0.24
TNFSF13B-201ENST00000375887 UNC13BO14795 1591 aa16.57■□□□□ 0.24
TNFSF13B-201ENST00000375887 MAST1Q9Y2H9 1570 aa16.55■□□□□ 0.24
TNFSF13B-201ENST00000375887 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
TNFSF13B-201ENST00000375887 ERBINQ96RT1 1412 aa16.55■□□□□ 0.24
TNFSF13B-201ENST00000375887 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
TNFSF13B-201ENST00000375887 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
TNFSF13B-201ENST00000375887 WASHC2CQ9Y4E1 1318 aa16.53■□□□□ 0.24
TNFSF13B-201ENST00000375887 IQGAP3Q86VI3 1631 aa16.53■□□□□ 0.24
TNFSF13B-201ENST00000375887 PLIN1O60240 522 aa16.52■□□□□ 0.24
TNFSF13B-201ENST00000375887 TMF1P82094 1093 aa16.52■□□□□ 0.23
TNFSF13B-201ENST00000375887 ATP10AO60312 1499 aa16.51■□□□□ 0.23
TNFSF13B-201ENST00000375887 SKAP1Q86WV1 359 aa16.5■□□□□ 0.23
TNFSF13B-201ENST00000375887 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
TNFSF13B-201ENST00000375887 PLXNC1O60486 1568 aa16.5■□□□□ 0.23
TNFSF13B-201ENST00000375887 CHD1O14646 1710 aa16.49■□□□□ 0.23
TNFSF13B-201ENST00000375887 MYO5CQ9NQX4 1742 aa16.49■□□□□ 0.23
TNFSF13B-201ENST00000375887 NBR1Q14596 966 aa16.49■□□□□ 0.23
TNFSF13B-201ENST00000375887 DUOX2Q9NRD8 1548 aa16.49■□□□□ 0.23
TNFSF13B-201ENST00000375887 LAMC1P11047 1609 aa16.49■□□□□ 0.23
TNFSF13B-201ENST00000375887 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
TNFSF13B-201ENST00000375887 ANP32AP39687 249 aaKnown RBP16.48■□□□□ 0.23
TNFSF13B-201ENST00000375887 MAGI2Q86UL8 1455 aa16.48■□□□□ 0.23
TNFSF13B-201ENST00000375887 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
TNFSF13B-201ENST00000375887 ABCC2Q92887 1545 aa16.48■□□□□ 0.23
TNFSF13B-201ENST00000375887 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
TNFSF13B-201ENST00000375887 PLCH2O75038 1416 aa16.47■□□□□ 0.23
TNFSF13B-201ENST00000375887 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
TNFSF13B-201ENST00000375887 EFCAB2Q5VUJ9 269 aa16.46■□□□□ 0.23
TNFSF13B-201ENST00000375887 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
TNFSF13B-201ENST00000375887 AFAP1Q8N556 730 aa16.45■□□□□ 0.22
TNFSF13B-201ENST00000375887 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
TNFSF13B-201ENST00000375887 EIF2AK4Q9P2K8 1649 aaKnown RBP16.44■□□□□ 0.22
TNFSF13B-201ENST00000375887 TCERG1O14776 1098 aaKnown RBP16.43■□□□□ 0.22
TNFSF13B-201ENST00000375887 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
TNFSF13B-201ENST00000375887 INSRP06213 1382 aa16.43■□□□□ 0.22
TNFSF13B-201ENST00000375887 PDE4AP27815 886 aa16.43■□□□□ 0.22
TNFSF13B-201ENST00000375887 DEKP35659 375 aaKnown RBP16.43■□□□□ 0.22
TNFSF13B-201ENST00000375887 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
TNFSF13B-201ENST00000375887 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
TNFSF13B-201ENST00000375887 PPP2R1AP30153 589 aa16.42■□□□□ 0.22
TNFSF13B-201ENST00000375887 ZBTB47Q9UFB7 747 aaPredicted RBP16.42■□□□□ 0.22
TNFSF13B-201ENST00000375887 KNSTRNQ9Y448 316 aa16.41■□□□□ 0.22
TNFSF13B-201ENST00000375887 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
TNFSF13B-201ENST00000375887 RNF17Q9BXT8 1623 aaKnown RBP16.41■□□□□ 0.22
TNFSF13B-201ENST00000375887 PLEKHH1Q9ULM0 1364 aa16.4■□□□□ 0.22
TNFSF13B-201ENST00000375887 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
TNFSF13B-201ENST00000375887 ZMYM4Q5VZL5 1548 aa16.4■□□□□ 0.22
TNFSF13B-201ENST00000375887 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
TNFSF13B-201ENST00000375887 ABCC1P33527 1531 aa16.39■□□□□ 0.21
TNFSF13B-201ENST00000375887 MADDQ8WXG6 1647 aa16.38■□□□□ 0.21
TNFSF13B-201ENST00000375887 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
TNFSF13B-201ENST00000375887 ZCCHC11Q5TAX3 1644 aaKnown RBP16.36■□□□□ 0.21
TNFSF13B-201ENST00000375887 MS4A1P11836 297 aa16.35■□□□□ 0.21
TNFSF13B-201ENST00000375887 ZNF521Q96K83 1311 aa16.35■□□□□ 0.21
TNFSF13B-201ENST00000375887 PTPRTO14522 1441 aa16.35■□□□□ 0.21
TNFSF13B-201ENST00000375887 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
TNFSF13B-201ENST00000375887 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms