RNA–Protein interactions for RNA: ENST00000375859.3

SPIN1-201, Transcript of spindlin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN1, Length 4,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-201ENST00000375859 KIF7Q2M1P5 1343 aa17.29■□□□□ 0.36
SPIN1-201ENST00000375859 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
SPIN1-201ENST00000375859 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
SPIN1-201ENST00000375859 NBPF1Q3BBV0 1214 aa17.27■□□□□ 0.36
SPIN1-201ENST00000375859 CD109Q6YHK3 1445 aa17.27■□□□□ 0.35
SPIN1-201ENST00000375859 KANK1Q14678 1352 aa17.27■□□□□ 0.35
SPIN1-201ENST00000375859 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPIN1-201ENST00000375859 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
SPIN1-201ENST00000375859 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
SPIN1-201ENST00000375859 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
SPIN1-201ENST00000375859 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
SPIN1-201ENST00000375859 ABCC1P33527 1531 aa17.23■□□□□ 0.35
SPIN1-201ENST00000375859 FAM69CQ0P6D2 419 aa17.22■□□□□ 0.35
SPIN1-201ENST00000375859 BCANQ96GW7 911 aa17.19■□□□□ 0.34
SPIN1-201ENST00000375859 ERBINQ96RT1 1412 aa17.19■□□□□ 0.34
SPIN1-201ENST00000375859 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
SPIN1-201ENST00000375859 PRKRIP1Q9H875 184 aaPredicted RBP17.17■□□□□ 0.34
SPIN1-201ENST00000375859 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
SPIN1-201ENST00000375859 WASHC2CQ9Y4E1 1318 aa17.17■□□□□ 0.34
SPIN1-201ENST00000375859 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
SPIN1-201ENST00000375859 PLA2R1Q13018 1463 aa17.14■□□□□ 0.33
SPIN1-201ENST00000375859 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.33
SPIN1-201ENST00000375859 KDM5DQ9BY66 1539 aa17.14■□□□□ 0.33
SPIN1-201ENST00000375859 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
SPIN1-201ENST00000375859 ATP7AQ04656 1500 aa17.13■□□□□ 0.33
SPIN1-201ENST00000375859 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
SPIN1-201ENST00000375859 NEFLP07196 543 aa17.12■□□□□ 0.33
SPIN1-201ENST00000375859 MLECQ14165 292 aa17.12■□□□□ 0.33
SPIN1-201ENST00000375859 SPATA31E1Q6ZUB1 1445 aa17.11■□□□□ 0.33
SPIN1-201ENST00000375859 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
SPIN1-201ENST00000375859 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
SPIN1-201ENST00000375859 ABCA9Q8IUA7 1624 aa17.09■□□□□ 0.33
SPIN1-201ENST00000375859 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
SPIN1-201ENST00000375859 FKBP8Q14318 412 aa17.09■□□□□ 0.33
SPIN1-201ENST00000375859 ZNF518AQ6AHZ1 1483 aa17.08■□□□□ 0.33
SPIN1-201ENST00000375859 RALGAPBQ86X10 1494 aa17.08■□□□□ 0.32
SPIN1-201ENST00000375859 A2MP01023 1474 aa17.08■□□□□ 0.32
SPIN1-201ENST00000375859 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
SPIN1-201ENST00000375859 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
SPIN1-201ENST00000375859 UHRF1BP1Q6BDS2 1440 aa17.06■□□□□ 0.32
SPIN1-201ENST00000375859 UNC13BO14795 1591 aa17.06■□□□□ 0.32
SPIN1-201ENST00000375859 TMF1P82094 1093 aa17.06■□□□□ 0.32
SPIN1-201ENST00000375859 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
SPIN1-201ENST00000375859 ARAP3Q8WWN8 1544 aa17.05■□□□□ 0.32
SPIN1-201ENST00000375859 SALL2Q9Y467 1007 aaPredicted RBP17.05■□□□□ 0.32
SPIN1-201ENST00000375859 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
SPIN1-201ENST00000375859 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
SPIN1-201ENST00000375859 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
SPIN1-201ENST00000375859 SUPT16HQ9Y5B9 1047 aaKnown RBP17.03■□□□□ 0.32
SPIN1-201ENST00000375859 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
SPIN1-201ENST00000375859 POGZQ7Z3K3 1410 aa17.02■□□□□ 0.31
SPIN1-201ENST00000375859 CFAP65Q6ZU64 1925 aaKnown RBP17.01■□□□□ 0.31
SPIN1-201ENST00000375859 ATP10AO60312 1499 aa17■□□□□ 0.31
SPIN1-201ENST00000375859 ADGRF5Q8IZF2 1346 aa17■□□□□ 0.31
SPIN1-201ENST00000375859 PANK3Q9H999 370 aa17■□□□□ 0.31
SPIN1-201ENST00000375859 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
SPIN1-201ENST00000375859 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
SPIN1-201ENST00000375859 KDM5CP41229 1560 aa16.98■□□□□ 0.31
SPIN1-201ENST00000375859 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
SPIN1-201ENST00000375859 ARID4BQ4LE39 1312 aaPredicted RBP16.97■□□□□ 0.31
SPIN1-201ENST00000375859 SAFB2Q14151 953 aaKnown RBP eCLIP16.97■□□□□ 0.31
SPIN1-201ENST00000375859 BCORL1Q5H9F3 1711 aa16.97■□□□□ 0.31
SPIN1-201ENST00000375859 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
SPIN1-201ENST00000375859 ESF1Q9H501 851 aaKnown RBP16.96■□□□□ 0.31
SPIN1-201ENST00000375859 MAGI2Q86UL8 1455 aa16.96■□□□□ 0.31
SPIN1-201ENST00000375859 INO80Q9ULG1 1556 aaPredicted RBP16.95■□□□□ 0.3
SPIN1-201ENST00000375859 E9PCH4 1651 aa16.94■□□□□ 0.3
SPIN1-201ENST00000375859 YEATS2Q9ULM3 1422 aa16.94■□□□□ 0.3
SPIN1-201ENST00000375859 TESK2Q96S53 571 aa16.94■□□□□ 0.3
SPIN1-201ENST00000375859 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
SPIN1-201ENST00000375859 STK26Q9P289 416 aa16.94■□□□□ 0.3
SPIN1-201ENST00000375859 KIDINS220Q9ULH0 1771 aa16.92■□□□□ 0.3
SPIN1-201ENST00000375859 FBXO31Q5XUX0 539 aaPredicted RBP16.92■□□□□ 0.3
SPIN1-201ENST00000375859 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
SPIN1-201ENST00000375859 KTN1Q86UP2 1357 aaKnown RBP16.91■□□□□ 0.3
SPIN1-201ENST00000375859 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
SPIN1-201ENST00000375859 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
SPIN1-201ENST00000375859 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
SPIN1-201ENST00000375859 TSPOAP1O95153 1857 aa16.9■□□□□ 0.3
SPIN1-201ENST00000375859 NEO1Q92859 1461 aa16.9■□□□□ 0.3
SPIN1-201ENST00000375859 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
SPIN1-201ENST00000375859 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
SPIN1-201ENST00000375859 PTPRTO14522 1441 aa16.89■□□□□ 0.29
SPIN1-201ENST00000375859 NOS1P29475 1434 aa16.89■□□□□ 0.29
SPIN1-201ENST00000375859 RALBP1Q15311 655 aa16.89■□□□□ 0.29
SPIN1-201ENST00000375859 IDI1Q13907 227 aa16.89■□□□□ 0.29
SPIN1-201ENST00000375859 TRPM2O94759 1503 aa16.89■□□□□ 0.29
SPIN1-201ENST00000375859 NPATQ14207 1427 aa16.89■□□□□ 0.29
SPIN1-201ENST00000375859 PRDM15P57071 1507 aaPredicted RBP16.88■□□□□ 0.29
SPIN1-201ENST00000375859 CLTCL1P53675 1640 aa16.88■□□□□ 0.29
SPIN1-201ENST00000375859 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
SPIN1-201ENST00000375859 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
SPIN1-201ENST00000375859 HECW2Q9P2P5 1572 aa16.87■□□□□ 0.29
SPIN1-201ENST00000375859 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
SPIN1-201ENST00000375859 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
SPIN1-201ENST00000375859 TET3O43151 1660 aa16.87■□□□□ 0.29
SPIN1-201ENST00000375859 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
SPIN1-201ENST00000375859 CFAP74Q9C0B2 1584 aa16.86■□□□□ 0.29
SPIN1-201ENST00000375859 TRPM1Q7Z4N2 1603 aa16.86■□□□□ 0.29
SPIN1-201ENST00000375859 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms