RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 EHBP1L1Q8N3D4 1523 aa15.65■□□□□ 0.1
NPLOC4-202ENST00000374747 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.09
NPLOC4-202ENST00000374747 HECW1Q76N89 1606 aa15.63■□□□□ 0.09
NPLOC4-202ENST00000374747 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
NPLOC4-202ENST00000374747 GOLGA6L4A6NEF3 574 aa15.62■□□□□ 0.09
NPLOC4-202ENST00000374747 FGD1P98174 961 aa15.61■□□□□ 0.09
NPLOC4-202ENST00000374747 ANKRD50Q9ULJ7 1429 aa15.61■□□□□ 0.09
NPLOC4-202ENST00000374747 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
NPLOC4-202ENST00000374747 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
NPLOC4-202ENST00000374747 EID1Q9Y6B2 187 aa15.6■□□□□ 0.09
NPLOC4-202ENST00000374747 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
NPLOC4-202ENST00000374747 NAIPQ13075 1403 aa15.6■□□□□ 0.09
NPLOC4-202ENST00000374747 KCNJ4P48050 445 aa15.59■□□□□ 0.09
NPLOC4-202ENST00000374747 FAM69CQ0P6D2 419 aa15.59■□□□□ 0.09
NPLOC4-202ENST00000374747 CCDC184Q52MB2 194 aa15.59■□□□□ 0.09
NPLOC4-202ENST00000374747 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
NPLOC4-202ENST00000374747 ARHGAP5Q13017 1502 aa15.59■□□□□ 0.09
NPLOC4-202ENST00000374747 OS9Q13438 667 aaPredicted RBP15.58■□□□□ 0.08
NPLOC4-202ENST00000374747 CFAP44Q96MT7 982 aa15.57■□□□□ 0.08
NPLOC4-202ENST00000374747 MAGI1Q96QZ7 1491 aaPredicted RBP15.57■□□□□ 0.08
NPLOC4-202ENST00000374747 VGFO15240 615 aaPredicted RBP15.57■□□□□ 0.08
NPLOC4-202ENST00000374747 MCCP23508 829 aa15.56■□□□□ 0.08
NPLOC4-202ENST00000374747 PTMSP20962 102 aa15.55■□□□□ 0.08
NPLOC4-202ENST00000374747 SPRYD3Q8NCJ5 442 aa15.55■□□□□ 0.08
NPLOC4-202ENST00000374747 HFM1A2PYH4 1435 aa15.55■□□□□ 0.08
NPLOC4-202ENST00000374747 STAC3Q96MF2 364 aa15.55■□□□□ 0.08
NPLOC4-202ENST00000374747 TERF2IPQ9NYB0 399 aa15.55■□□□□ 0.08
NPLOC4-202ENST00000374747 ST20-MTHFSA0A0A6YYL1 179 aa15.55■□□□□ 0.08
NPLOC4-202ENST00000374747 PLEKHH2Q8IVE3 1493 aa15.55■□□□□ 0.08
NPLOC4-202ENST00000374747 C11orf95C9JLR9 678 aaPredicted RBP15.55■□□□□ 0.08
NPLOC4-202ENST00000374747 WASHC2AQ641Q2 1341 aa15.54■□□□□ 0.08
NPLOC4-202ENST00000374747 NUTM2DQ5VT03 806 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-202ENST00000374747 DRC7Q8IY82 874 aa15.54■□□□□ 0.08
NPLOC4-202ENST00000374747 GBP4Q96PP9 640 aa15.54■□□□□ 0.08
NPLOC4-202ENST00000374747 TAOK2Q9UL54 1235 aa15.53■□□□□ 0.08
NPLOC4-202ENST00000374747 GRIN2AQ12879 1464 aa15.53■□□□□ 0.08
NPLOC4-202ENST00000374747 NAP1L2Q9ULW6 460 aaPredicted RBP15.52■□□□□ 0.08
NPLOC4-202ENST00000374747 TCERG1O14776 1098 aaKnown RBP15.52■□□□□ 0.07
NPLOC4-202ENST00000374747 USP47Q96K76 1375 aa15.52■□□□□ 0.07
NPLOC4-202ENST00000374747 EPRSP07814 1512 aaKnown RBP15.52■□□□□ 0.07
NPLOC4-202ENST00000374747 TRAK1Q9UPV9 953 aa15.51■□□□□ 0.07
NPLOC4-202ENST00000374747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.51■□□□□ 0.07
NPLOC4-202ENST00000374747 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
NPLOC4-202ENST00000374747 NLRP13Q86W25 1043 aa15.51■□□□□ 0.07
NPLOC4-202ENST00000374747 SUPT6HQ7KZ85 1726 aaKnown RBP15.5■□□□□ 0.07
NPLOC4-202ENST00000374747 TULP1O00294 542 aaPredicted RBP15.5■□□□□ 0.07
NPLOC4-202ENST00000374747 KIAA2012Q0VF49 1180 aa15.5■□□□□ 0.07
NPLOC4-202ENST00000374747 AFAP1Q8N556 730 aa15.5■□□□□ 0.07
NPLOC4-202ENST00000374747 SOX12O15370 315 aa15.49■□□□□ 0.07
NPLOC4-202ENST00000374747 C9orf84Q5VXU9 1444 aa15.48■□□□□ 0.07
NPLOC4-202ENST00000374747 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
NPLOC4-202ENST00000374747 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
NPLOC4-202ENST00000374747 MAGI3Q5TCQ9 1506 aa15.46■□□□□ 0.07
NPLOC4-202ENST00000374747 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.07
NPLOC4-202ENST00000374747 RCAN3Q9UKA8 241 aa15.46■□□□□ 0.07
NPLOC4-202ENST00000374747 GZF1Q9H116 711 aaPredicted RBP15.46■□□□□ 0.06
NPLOC4-202ENST00000374747 AMER1Q5JTC6 1135 aaPredicted RBP15.45■□□□□ 0.06
NPLOC4-202ENST00000374747 SLKQ9H2G2 1235 aaPredicted RBP15.45■□□□□ 0.06
NPLOC4-202ENST00000374747 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
NPLOC4-202ENST00000374747 IPO9Q96P70 1041 aaKnown RBP15.45■□□□□ 0.06
NPLOC4-202ENST00000374747 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
NPLOC4-202ENST00000374747 PTPN23Q9H3S7 1636 aa15.44■□□□□ 0.06
NPLOC4-202ENST00000374747 GOLGA6L3A6NEY3 463 aa15.44■□□□□ 0.06
NPLOC4-202ENST00000374747 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
NPLOC4-202ENST00000374747 EVC2Q86UK5 1308 aa15.44■□□□□ 0.06
NPLOC4-202ENST00000374747 DENND4BO75064 1496 aaPredicted RBP15.44■□□□□ 0.06
NPLOC4-202ENST00000374747 CALD1Q05682 793 aaKnown RBP15.44■□□□□ 0.06
NPLOC4-202ENST00000374747 PANK3Q9H999 370 aa15.44■□□□□ 0.06
NPLOC4-202ENST00000374747 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
NPLOC4-202ENST00000374747 DAPK1P53355 1430 aa15.43■□□□□ 0.06
NPLOC4-202ENST00000374747 IPO8O15397 1037 aaKnown RBP15.43■□□□□ 0.06
NPLOC4-202ENST00000374747 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
NPLOC4-202ENST00000374747 RTF1Q92541 710 aaKnown RBP15.42■□□□□ 0.06
NPLOC4-202ENST00000374747 RWDD1Q9H446 243 aaPredicted RBP15.42■□□□□ 0.06
NPLOC4-202ENST00000374747 SYAP1Q96A49 352 aaPredicted RBP15.42■□□□□ 0.06
NPLOC4-202ENST00000374747 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
NPLOC4-202ENST00000374747 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
NPLOC4-202ENST00000374747 NGDNQ8NEJ9 315 aaKnown RBP15.4■□□□□ 0.06
NPLOC4-202ENST00000374747 PRKRIP1Q9H875 184 aaPredicted RBP15.39■□□□□ 0.05
NPLOC4-202ENST00000374747 KIAA1211Q6ZU35 1233 aa15.39■□□□□ 0.05
NPLOC4-202ENST00000374747 ARID3AQ99856 593 aa15.39■□□□□ 0.05
NPLOC4-202ENST00000374747 ROCK1Q13464 1354 aa15.39■□□□□ 0.05
NPLOC4-202ENST00000374747 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
NPLOC4-202ENST00000374747 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
NPLOC4-202ENST00000374747 GOLGA2Q08379 1002 aa15.38■□□□□ 0.05
NPLOC4-202ENST00000374747 KDM6BO15054 1643 aa15.38■□□□□ 0.05
NPLOC4-202ENST00000374747 PDE3BQ13370 1112 aa15.38■□□□□ 0.05
NPLOC4-202ENST00000374747 LRRIQ1Q96JM4 1722 aa15.38■□□□□ 0.05
NPLOC4-202ENST00000374747 HTATSF1O43719 755 aaKnown RBP15.37■□□□□ 0.05
NPLOC4-202ENST00000374747 CGNL1Q0VF96 1302 aa15.37■□□□□ 0.05
NPLOC4-202ENST00000374747 SCAPERQ9BY12 1400 aa15.37■□□□□ 0.05
NPLOC4-202ENST00000374747 PMFBP1Q8TBY8 1022 aa15.36■□□□□ 0.05
NPLOC4-202ENST00000374747 GNL2Q13823 731 aaKnown RBP15.36■□□□□ 0.05
NPLOC4-202ENST00000374747 CTTNBP2Q8WZ74 1663 aa15.35■□□□□ 0.05
NPLOC4-202ENST00000374747 CENPJQ9HC77 1338 aaPredicted RBP15.35■□□□□ 0.05
NPLOC4-202ENST00000374747 TNNT3P45378 269 aaPredicted RBP15.35■□□□□ 0.05
NPLOC4-202ENST00000374747 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
NPLOC4-202ENST00000374747 CCDC7Q96M83 1385 aa15.34■□□□□ 0.05
NPLOC4-202ENST00000374747 APBB1O00213 710 aa15.34■□□□□ 0.05
NPLOC4-202ENST00000374747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■■■■□ 23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms