RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 DSG3P32926 999 aa7.44□□□□□ -1.22
SRRM1-202ENST00000374389 HNRNPUQ00839 825 aaKnown RBP eCLIP7.44□□□□□ -1.22
SRRM1-202ENST00000374389 NUP155O75694 1391 aa7.44□□□□□ -1.22
SRRM1-202ENST00000374389 PRKRIP1Q9H875 184 aaPredicted RBP7.44□□□□□ -1.22
SRRM1-202ENST00000374389 KIF15Q9NS87 1388 aa7.43□□□□□ -1.22
SRRM1-202ENST00000374389 ZNF326Q5BKZ1 582 aaKnown RBP7.43□□□□□ -1.22
SRRM1-202ENST00000374389 ZBTB22O15209 634 aa7.42□□□□□ -1.22
SRRM1-202ENST00000374389 SAMD9LQ8IVG5 1584 aa7.42□□□□□ -1.22
SRRM1-202ENST00000374389 KDM5DQ9BY66 1539 aa7.42□□□□□ -1.22
SRRM1-202ENST00000374389 USP47Q96K76 1375 aa7.42□□□□□ -1.22
SRRM1-202ENST00000374389 ERCC6L2Q5T890 1561 aa7.41□□□□□ -1.22
SRRM1-202ENST00000374389 BCORL1Q5H9F3 1711 aa7.41□□□□□ -1.22
SRRM1-202ENST00000374389 TSPY4P0CV99 314 aa7.41□□□□□ -1.22
SRRM1-202ENST00000374389 TSPY10P0CW01 314 aa7.41□□□□□ -1.22
SRRM1-202ENST00000374389 ARHGEF5Q12774 1597 aa7.41□□□□□ -1.22
SRRM1-202ENST00000374389 DHX29Q7Z478 1369 aaKnown RBP7.4□□□□□ -1.22
SRRM1-202ENST00000374389 CHD1O14646 1710 aa7.4□□□□□ -1.22
SRRM1-202ENST00000374389 UHRF1BP1Q6BDS2 1440 aa7.4□□□□□ -1.22
SRRM1-202ENST00000374389 CCDC141Q6ZP82 1450 aa7.4□□□□□ -1.22
SRRM1-202ENST00000374389 TTC37Q6PGP7 1564 aa7.4□□□□□ -1.23
SRRM1-202ENST00000374389 NEFLP07196 543 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 MRS2Q9HD23 443 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 KDM5CP41229 1560 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 PREX2Q70Z35 1606 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 CDC42BPBQ9Y5S2 1711 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 FAM9BQ8IZU0 186 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 RALGAPBQ86X10 1494 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 SYCP2Q9BX26 1530 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 SHROOM2Q13796 1616 aa7.39□□□□□ -1.23
SRRM1-202ENST00000374389 IRX6P78412 446 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-202ENST00000374389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.38□□□□□ -1.23
SRRM1-202ENST00000374389 TULP1O00294 542 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-202ENST00000374389 CNGB1Q14028 1251 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-202ENST00000374389 POLR3GLQ9BT43 218 aa7.38□□□□□ -1.23
SRRM1-202ENST00000374389 ARHGEF12Q9NZN5 1544 aa7.37□□□□□ -1.23
SRRM1-202ENST00000374389 FAM135AQ9P2D6 1515 aa7.37□□□□□ -1.23
SRRM1-202ENST00000374389 KDM2AQ9Y2K7 1162 aa7.37□□□□□ -1.23
SRRM1-202ENST00000374389 RIMBP3CA6NJZ7 1639 aa7.37□□□□□ -1.23
SRRM1-202ENST00000374389 RIMBP3BA6NNM3 1639 aa7.37□□□□□ -1.23
SRRM1-202ENST00000374389 RIMBP3Q9UFD9 1639 aa7.37□□□□□ -1.23
SRRM1-202ENST00000374389 POLR1AO95602 1720 aaPredicted RBP7.37□□□□□ -1.23
SRRM1-202ENST00000374389 PLA2R1Q13018 1463 aa7.36□□□□□ -1.23
SRRM1-202ENST00000374389 ARHGAP5Q13017 1502 aa7.36□□□□□ -1.23
SRRM1-202ENST00000374389 ABCC2Q92887 1545 aa7.36□□□□□ -1.23
SRRM1-202ENST00000374389 DCAF11Q8TEB1 546 aa7.36□□□□□ -1.23
SRRM1-202ENST00000374389 CARD11Q9BXL7 1154 aa7.36□□□□□ -1.23
SRRM1-202ENST00000374389 ATF5Q9Y2D1 282 aaPredicted RBP7.36□□□□□ -1.23
SRRM1-202ENST00000374389 ST20-MTHFSA0A0A6YYL1 179 aa7.35□□□□□ -1.23
SRRM1-202ENST00000374389 PLEKHH2Q8IVE3 1493 aa7.35□□□□□ -1.23
SRRM1-202ENST00000374389 ZBED9Q6R2W3 1325 aa7.35□□□□□ -1.23
SRRM1-202ENST00000374389 RSPH4AQ5TD94 716 aa7.34□□□□□ -1.23
SRRM1-202ENST00000374389 CHRDL2Q6WN34 429 aa7.34□□□□□ -1.23
SRRM1-202ENST00000374389 MAST1Q9Y2H9 1570 aa7.34□□□□□ -1.23
SRRM1-202ENST00000374389 PRAG1Q86YV5 1406 aa7.33□□□□□ -1.24
SRRM1-202ENST00000374389 UNC13BO14795 1591 aa7.33□□□□□ -1.24
SRRM1-202ENST00000374389 SENP3-EIF4A1A0A087X0R7 540 aa7.33□□□□□ -1.24
SRRM1-202ENST00000374389 NBPF1Q3BBV0 1214 aa7.33□□□□□ -1.24
SRRM1-202ENST00000374389 CCDC144AA2RUR9 1427 aa7.33□□□□□ -1.24
SRRM1-202ENST00000374389 ARID4BQ4LE39 1312 aaPredicted RBP7.33□□□□□ -1.24
SRRM1-202ENST00000374389 A2MP01023 1474 aa7.33□□□□□ -1.24
SRRM1-202ENST00000374389 ROCK2O75116 1388 aaKnown RBP7.32□□□□□ -1.24
SRRM1-202ENST00000374389 RGL3Q3MIN7 710 aa7.32□□□□□ -1.24
SRRM1-202ENST00000374389 AMER1Q5JTC6 1135 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-202ENST00000374389 CLASP1Q7Z460 1538 aa7.32□□□□□ -1.24
SRRM1-202ENST00000374389 PLXNC1O60486 1568 aa7.32□□□□□ -1.24
SRRM1-202ENST00000374389 TRAPPC8Q9Y2L5 1435 aa7.32□□□□□ -1.24
SRRM1-202ENST00000374389 PLCH2O75038 1416 aa7.31□□□□□ -1.24
SRRM1-202ENST00000374389 ZCCHC11Q5TAX3 1644 aaKnown RBP7.31□□□□□ -1.24
SRRM1-202ENST00000374389 MAGI2Q86UL8 1455 aa7.3□□□□□ -1.24
SRRM1-202ENST00000374389 MYO5CQ9NQX4 1742 aa7.3□□□□□ -1.24
SRRM1-202ENST00000374389 FOXD4L1Q9NU39 408 aa7.3□□□□□ -1.24
SRRM1-202ENST00000374389 IQGAP3Q86VI3 1631 aa7.3□□□□□ -1.24
SRRM1-202ENST00000374389 PNISRQ8TF01 805 aaKnown RBP7.3□□□□□ -1.24
SRRM1-202ENST00000374389 RBM19Q9Y4C8 960 aaKnown RBP7.3□□□□□ -1.24
SRRM1-202ENST00000374389 TRPM1Q7Z4N2 1603 aa7.3□□□□□ -1.24
SRRM1-202ENST00000374389 ABCC1P33527 1531 aa7.3□□□□□ -1.24
SRRM1-202ENST00000374389 MYCNP04198 464 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-202ENST00000374389 GPRASP1Q5JY77 1395 aa7.29□□□□□ -1.24
SRRM1-202ENST00000374389 UHRF1BP1LA0JNW5 1464 aa7.29□□□□□ -1.24
SRRM1-202ENST00000374389 DUOX2Q9NRD8 1548 aa7.29□□□□□ -1.24
SRRM1-202ENST00000374389 ERBINQ96RT1 1412 aa7.29□□□□□ -1.24
SRRM1-202ENST00000374389 E9PCH4 1651 aa7.28□□□□□ -1.24
SRRM1-202ENST00000374389 POLA2Q14181 598 aa7.28□□□□□ -1.24
SRRM1-202ENST00000374389 EFCAB2Q5VUJ9 269 aa7.28□□□□□ -1.24
SRRM1-202ENST00000374389 ATP10AO60312 1499 aa7.28□□□□□ -1.24
SRRM1-202ENST00000374389 DISP3Q9P2K9 1392 aa7.28□□□□□ -1.24
SRRM1-202ENST00000374389 AFAP1Q8N556 730 aa7.28□□□□□ -1.24
SRRM1-202ENST00000374389 TESK2Q96S53 571 aa7.28□□□□□ -1.24
SRRM1-202ENST00000374389 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
SRRM1-202ENST00000374389 ZNF219Q9P2Y4 722 aaPredicted RBP7.28□□□□□ -1.24
SRRM1-202ENST00000374389 SMG6Q86US8 1419 aaKnown RBP7.28□□□□□ -1.24
SRRM1-202ENST00000374389 LRPPRCP42704 1394 aaKnown RBP7.27□□□□□ -1.25
SRRM1-202ENST00000374389 SAMD1Q6SPF0 538 aaPredicted RBP7.27□□□□□ -1.25
SRRM1-202ENST00000374389 B4GALNT3Q6L9W6 998 aa7.27□□□□□ -1.25
SRRM1-202ENST00000374389 PPP4R2Q9NY27 417 aa7.27□□□□□ -1.25
SRRM1-202ENST00000374389 PRDM15P57071 1507 aaPredicted RBP7.27□□□□□ -1.25
SRRM1-202ENST00000374389 COL17A1Q9UMD9 1497 aaPredicted RBP7.27□□□□□ -1.25
SRRM1-202ENST00000374389 PER1O15534 1290 aaPredicted RBP7.26□□□□□ -1.25
SRRM1-202ENST00000374389 TMC1Q8TDI8 760 aa7.26□□□□□ -1.25
SRRM1-202ENST00000374389 MYBBP1AQ9BQG0 1328 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms