RNA–Protein interactions for RNA: ENST00000373832.5

RCC1-202, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-202ENST00000373832 CCDC141Q6ZP82 1450 aa23.63■■□□□ 1.37
RCC1-202ENST00000373832 MYBBP1AQ9BQG0 1328 aaKnown RBP23.63■■□□□ 1.37
RCC1-202ENST00000373832 KTN1Q86UP2 1357 aaKnown RBP23.63■■□□□ 1.37
RCC1-202ENST00000373832 RALBP1Q15311 655 aa23.62■■□□□ 1.37
RCC1-202ENST00000373832 BRD4O60885 1362 aaPredicted RBP23.62■■□□□ 1.37
RCC1-202ENST00000373832 FAM135AQ9P2D6 1515 aa23.61■■□□□ 1.37
RCC1-202ENST00000373832 CCDC136Q96JN2 1154 aa23.61■■□□□ 1.37
RCC1-202ENST00000373832 SAMD9LQ8IVG5 1584 aa23.61■■□□□ 1.37
RCC1-202ENST00000373832 LRPPRCP42704 1394 aaKnown RBP23.59■■□□□ 1.37
RCC1-202ENST00000373832 RSPH4AQ5TD94 716 aa23.59■■□□□ 1.37
RCC1-202ENST00000373832 E9PCH4 1651 aa23.58■■□□□ 1.36
RCC1-202ENST00000373832 PREX2Q70Z35 1606 aa23.57■■□□□ 1.36
RCC1-202ENST00000373832 CDC42BPBQ9Y5S2 1711 aa23.57■■□□□ 1.36
RCC1-202ENST00000373832 CCDC144AA2RUR9 1427 aa23.57■■□□□ 1.36
RCC1-202ENST00000373832 PRAG1Q86YV5 1406 aa23.55■■□□□ 1.36
RCC1-202ENST00000373832 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
RCC1-202ENST00000373832 RGL3Q3MIN7 710 aa23.53■■□□□ 1.36
RCC1-202ENST00000373832 SYCP2Q9BX26 1530 aa23.5■■□□□ 1.35
RCC1-202ENST00000373832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.35
RCC1-202ENST00000373832 NLRP13Q86W25 1043 aa23.49■■□□□ 1.35
RCC1-202ENST00000373832 NBPF1Q3BBV0 1214 aa23.49■■□□□ 1.35
RCC1-202ENST00000373832 ARHGAP5Q13017 1502 aa23.48■■□□□ 1.35
RCC1-202ENST00000373832 UNC13BO14795 1591 aa23.47■■□□□ 1.35
RCC1-202ENST00000373832 PARD3Q8TEW0 1356 aa23.47■■□□□ 1.35
RCC1-202ENST00000373832 MAST1Q9Y2H9 1570 aa23.46■■□□□ 1.35
RCC1-202ENST00000373832 PLA2R1Q13018 1463 aa23.45■■□□□ 1.34
RCC1-202ENST00000373832 A2MP01023 1474 aa23.45■■□□□ 1.34
RCC1-202ENST00000373832 GPRASP1Q5JY77 1395 aa23.45■■□□□ 1.34
RCC1-202ENST00000373832 TTC37Q6PGP7 1564 aa23.44■■□□□ 1.34
RCC1-202ENST00000373832 RRP1P56182 461 aaKnown RBP23.43■■□□□ 1.34
RCC1-202ENST00000373832 SALL2Q9Y467 1007 aaPredicted RBP23.43■■□□□ 1.34
RCC1-202ENST00000373832 PER1O15534 1290 aaPredicted RBP23.42■■□□□ 1.34
RCC1-202ENST00000373832 BCL11AQ9H165 835 aa23.41■■□□□ 1.34
RCC1-202ENST00000373832 NOP58Q9Y2X3 529 aaKnown RBP23.41■■□□□ 1.34
RCC1-202ENST00000373832 COL17A1Q9UMD9 1497 aaPredicted RBP23.41■■□□□ 1.34
RCC1-202ENST00000373832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.41■■□□□ 1.34
RCC1-202ENST00000373832 RCAN3Q9UKA8 241 aa23.41■■□□□ 1.34
RCC1-202ENST00000373832 LAMC1P11047 1609 aa23.41■■□□□ 1.34
RCC1-202ENST00000373832 PDE3BQ13370 1112 aa23.4■■□□□ 1.34
RCC1-202ENST00000373832 IQGAP3Q86VI3 1631 aa23.39■■□□□ 1.34
RCC1-202ENST00000373832 PRDM15P57071 1507 aaPredicted RBP23.39■■□□□ 1.34
RCC1-202ENST00000373832 PLEKHH2Q8IVE3 1493 aa23.39■■□□□ 1.34
RCC1-202ENST00000373832 PLXNC1O60486 1568 aa23.39■■□□□ 1.33
RCC1-202ENST00000373832 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
RCC1-202ENST00000373832 WASHC2CQ9Y4E1 1318 aa23.37■■□□□ 1.33
RCC1-202ENST00000373832 CC2D1BQ5T0F9 858 aaKnown RBP23.37■■□□□ 1.33
RCC1-202ENST00000373832 TESK2Q96S53 571 aa23.37■■□□□ 1.33
RCC1-202ENST00000373832 EIF2AK4Q9P2K8 1649 aaKnown RBP23.37■■□□□ 1.33
RCC1-202ENST00000373832 MYO5CQ9NQX4 1742 aa23.37■■□□□ 1.33
RCC1-202ENST00000373832 ANP32AP39687 249 aaKnown RBP23.37■■□□□ 1.33
RCC1-202ENST00000373832 ERBINQ96RT1 1412 aa23.36■■□□□ 1.33
RCC1-202ENST00000373832 EXOC6Q8TAG9 804 aa23.36■■□□□ 1.33
RCC1-202ENST00000373832 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
RCC1-202ENST00000373832 DUOX2Q9NRD8 1548 aa23.35■■□□□ 1.33
RCC1-202ENST00000373832 TMF1P82094 1093 aa23.34■■□□□ 1.33
RCC1-202ENST00000373832 PANK3Q9H999 370 aa23.34■■□□□ 1.33
RCC1-202ENST00000373832 CHD1O14646 1710 aa23.33■■□□□ 1.33
RCC1-202ENST00000373832 ATP10AO60312 1499 aa23.31■■□□□ 1.32
RCC1-202ENST00000373832 PAK3O75914 559 aaPredicted RBP23.31■■□□□ 1.32
RCC1-202ENST00000373832 IPO9Q96P70 1041 aaKnown RBP23.3■■□□□ 1.32
RCC1-202ENST00000373832 ABCC2Q92887 1545 aa23.3■■□□□ 1.32
RCC1-202ENST00000373832 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
RCC1-202ENST00000373832 SHROOM2Q13796 1616 aa23.29■■□□□ 1.32
RCC1-202ENST00000373832 MAGI2Q86UL8 1455 aa23.29■■□□□ 1.32
RCC1-202ENST00000373832 INSRP06213 1382 aa23.28■■□□□ 1.32
RCC1-202ENST00000373832 BLMP54132 1417 aaPredicted RBP23.27■■□□□ 1.32
RCC1-202ENST00000373832 ZMYM4Q5VZL5 1548 aa23.26■■□□□ 1.31
RCC1-202ENST00000373832 TCERG1O14776 1098 aaKnown RBP23.24■■□□□ 1.31
RCC1-202ENST00000373832 EFCAB2Q5VUJ9 269 aa23.23■■□□□ 1.31
RCC1-202ENST00000373832 ZBTB47Q9UFB7 747 aaPredicted RBP23.23■■□□□ 1.31
RCC1-202ENST00000373832 PLCH2O75038 1416 aa23.23■■□□□ 1.31
RCC1-202ENST00000373832 RNF17Q9BXT8 1623 aaKnown RBP23.23■■□□□ 1.31
RCC1-202ENST00000373832 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
RCC1-202ENST00000373832 NBR1Q14596 966 aa23.22■■□□□ 1.31
RCC1-202ENST00000373832 PLIN1O60240 522 aa23.18■■□□□ 1.3
RCC1-202ENST00000373832 KNSTRNQ9Y448 316 aa23.17■■□□□ 1.3
RCC1-202ENST00000373832 ABCC1P33527 1531 aa23.17■■□□□ 1.3
RCC1-202ENST00000373832 DEKP35659 375 aaKnown RBP23.17■■□□□ 1.3
RCC1-202ENST00000373832 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
RCC1-202ENST00000373832 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
RCC1-202ENST00000373832 ADAMTS8Q9UP79 889 aa23.16■■□□□ 1.3
RCC1-202ENST00000373832 WDR7Q9Y4E6 1490 aa23.15■■□□□ 1.3
RCC1-202ENST00000373832 MS4A1P11836 297 aa23.14■■□□□ 1.3
RCC1-202ENST00000373832 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.3
RCC1-202ENST00000373832 PDE4AP27815 886 aa23.14■■□□□ 1.29
RCC1-202ENST00000373832 NPM2Q86SE8 214 aaKnown RBP23.14■■□□□ 1.29
RCC1-202ENST00000373832 SPAG9O60271 1321 aaKnown RBP23.13■■□□□ 1.29
RCC1-202ENST00000373832 CRBNQ96SW2 442 aa23.13■■□□□ 1.29
RCC1-202ENST00000373832 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
RCC1-202ENST00000373832 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
RCC1-202ENST00000373832 WDR43Q15061 677 aaKnown RBP eCLIP23.12■■□□□ 1.29
RCC1-202ENST00000373832 CDCA8Q53HL2 280 aa23.12■■□□□ 1.29
RCC1-202ENST00000373832 TRPM2O94759 1503 aa23.1■■□□□ 1.29
RCC1-202ENST00000373832 BACH2Q9BYV9 841 aa23.1■■□□□ 1.29
RCC1-202ENST00000373832 SCAF11Q99590 1463 aaKnown RBP23.09■■□□□ 1.29
RCC1-202ENST00000373832 STAC3Q96MF2 364 aa23.09■■□□□ 1.29
RCC1-202ENST00000373832 SPHKAPQ2M3C7 1700 aa23.08■■□□□ 1.29
RCC1-202ENST00000373832 AMER1Q5JTC6 1135 aaPredicted RBP23.08■■□□□ 1.29
RCC1-202ENST00000373832 CEP152O94986 1710 aa23.07■■□□□ 1.28
RCC1-202ENST00000373832 RTEL1-TNFRSF6BF6WH68 1400 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms