RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
LMX1B-202ENST00000373474 PDE4AP27815 886 aa17.74■□□□□ 0.43
LMX1B-202ENST00000373474 FANCIQ9NVI1 1328 aa17.74■□□□□ 0.43
LMX1B-202ENST00000373474 SPAG9O60271 1321 aaKnown RBP17.73■□□□□ 0.43
LMX1B-202ENST00000373474 ARID3AQ99856 593 aa17.73■□□□□ 0.43
LMX1B-202ENST00000373474 FANCD2Q9BXW9 1451 aa17.73■□□□□ 0.43
LMX1B-202ENST00000373474 TPM4P67936 248 aa17.73■□□□□ 0.43
LMX1B-202ENST00000373474 FAM161AQ3B820 660 aa17.73■□□□□ 0.43
LMX1B-202ENST00000373474 NOC3LQ8WTT2 800 aaKnown RBP17.72■□□□□ 0.43
LMX1B-202ENST00000373474 CLUAP1Q96AJ1 413 aa17.72■□□□□ 0.43
LMX1B-202ENST00000373474 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
LMX1B-202ENST00000373474 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
LMX1B-202ENST00000373474 HMMRO75330 724 aa17.71■□□□□ 0.43
LMX1B-202ENST00000373474 LMOD3Q0VAK6 560 aa17.7■□□□□ 0.42
LMX1B-202ENST00000373474 STK31Q9BXU1 1019 aa17.7■□□□□ 0.42
LMX1B-202ENST00000373474 E9PSI1 815 aa17.69■□□□□ 0.42
LMX1B-202ENST00000373474 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
LMX1B-202ENST00000373474 CRBNQ96SW2 442 aa17.69■□□□□ 0.42
LMX1B-202ENST00000373474 CHMP4AQ9BY43 222 aa17.68■□□□□ 0.42
LMX1B-202ENST00000373474 FGD6Q6ZV73 1430 aa17.68■□□□□ 0.42
LMX1B-202ENST00000373474 PLIN1O60240 522 aa17.67■□□□□ 0.42
LMX1B-202ENST00000373474 DDX11L8A8MPP1 907 aa17.66■□□□□ 0.42
LMX1B-202ENST00000373474 CALRP27797 417 aaKnown RBP17.66■□□□□ 0.42
LMX1B-202ENST00000373474 LRRC9Q6ZRR7 1453 aa17.66■□□□□ 0.42
LMX1B-202ENST00000373474 CNTLNQ9NXG0 1405 aa17.66■□□□□ 0.42
LMX1B-202ENST00000373474 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
LMX1B-202ENST00000373474 NPHP1O15259 732 aa17.66■□□□□ 0.42
LMX1B-202ENST00000373474 GNL2Q13823 731 aaKnown RBP17.66■□□□□ 0.42
LMX1B-202ENST00000373474 CSPP1Q1MSJ5 1256 aa17.65■□□□□ 0.42
LMX1B-202ENST00000373474 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
LMX1B-202ENST00000373474 FGD5Q6ZNL6 1462 aa17.65■□□□□ 0.42
LMX1B-202ENST00000373474 TRIM6-TRIM34B2RNG4 842 aa17.64■□□□□ 0.42
LMX1B-202ENST00000373474 JPH4Q96JJ6 628 aa17.64■□□□□ 0.41
LMX1B-202ENST00000373474 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
LMX1B-202ENST00000373474 RRP7AQ9Y3A4 280 aaKnown RBP17.63■□□□□ 0.41
LMX1B-202ENST00000373474 IGF1RP08069 1367 aa17.63■□□□□ 0.41
LMX1B-202ENST00000373474 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
LMX1B-202ENST00000373474 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
LMX1B-202ENST00000373474 PHF14O94880 888 aa17.63■□□□□ 0.41
LMX1B-202ENST00000373474 ST18O60284 1047 aa17.62■□□□□ 0.41
LMX1B-202ENST00000373474 WASHC2CQ9Y4E1 1318 aa17.62■□□□□ 0.41
LMX1B-202ENST00000373474 TRAK1Q9UPV9 953 aa17.62■□□□□ 0.41
LMX1B-202ENST00000373474 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
LMX1B-202ENST00000373474 GSE1Q14687 1217 aa17.61■□□□□ 0.41
LMX1B-202ENST00000373474 HDAC5Q9UQL6 1122 aa17.61■□□□□ 0.41
LMX1B-202ENST00000373474 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
LMX1B-202ENST00000373474 NUTM2DQ5VT03 806 aaPredicted RBP17.6■□□□□ 0.41
LMX1B-202ENST00000373474 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
LMX1B-202ENST00000373474 SLC4A10Q6U841 1118 aa17.6■□□□□ 0.41
LMX1B-202ENST00000373474 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
LMX1B-202ENST00000373474 CCDC34Q96HJ3 373 aa17.59■□□□□ 0.41
LMX1B-202ENST00000373474 KIF7Q2M1P5 1343 aa17.58■□□□□ 0.4
LMX1B-202ENST00000373474 SLC4A3P48751 1232 aa17.58■□□□□ 0.4
LMX1B-202ENST00000373474 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
LMX1B-202ENST00000373474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.57■□□□□ 0.4
LMX1B-202ENST00000373474 FYCO1Q9BQS8 1478 aa17.57■□□□□ 0.4
LMX1B-202ENST00000373474 CASKIN1Q8WXD9 1431 aa17.56■□□□□ 0.4
LMX1B-202ENST00000373474 RRBP1Q9P2E9 1410 aaKnown RBP17.56■□□□□ 0.4
LMX1B-202ENST00000373474 EVC2Q86UK5 1308 aa17.56■□□□□ 0.4
LMX1B-202ENST00000373474 GPS2Q13227 327 aa17.56■□□□□ 0.4
LMX1B-202ENST00000373474 SKOR2Q2VWA4 1001 aaPredicted RBP17.56■□□□□ 0.4
LMX1B-202ENST00000373474 NGEFQ8N5V2 710 aa17.56■□□□□ 0.4
LMX1B-202ENST00000373474 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
LMX1B-202ENST00000373474 COG6Q9Y2V7 657 aa17.55■□□□□ 0.4
LMX1B-202ENST00000373474 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
LMX1B-202ENST00000373474 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
LMX1B-202ENST00000373474 ANKRD45Q5TZF3 282 aa17.54■□□□□ 0.4
LMX1B-202ENST00000373474 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
LMX1B-202ENST00000373474 ZNF771Q7L3S4 317 aaPredicted RBP17.54■□□□□ 0.4
LMX1B-202ENST00000373474 APAF1O14727 1248 aa17.53■□□□□ 0.4
LMX1B-202ENST00000373474 NCOA2Q15596 1464 aa17.53■□□□□ 0.4
LMX1B-202ENST00000373474 TPM3P06753 285 aa17.52■□□□□ 0.4
LMX1B-202ENST00000373474 PTPRGP23470 1445 aa17.52■□□□□ 0.4
LMX1B-202ENST00000373474 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
LMX1B-202ENST00000373474 CLSTN1O94985 981 aa17.52■□□□□ 0.4
LMX1B-202ENST00000373474 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.4
LMX1B-202ENST00000373474 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.39
LMX1B-202ENST00000373474 AMPHP49418 695 aa17.51■□□□□ 0.39
LMX1B-202ENST00000373474 KIF16BQ96L93 1317 aa17.51■□□□□ 0.39
LMX1B-202ENST00000373474 DDX19BQ9UMR2 479 aa17.51■□□□□ 0.39
LMX1B-202ENST00000373474 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-202ENST00000373474 NGDNQ8NEJ9 315 aaKnown RBP17.49■□□□□ 0.39
LMX1B-202ENST00000373474 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
LMX1B-202ENST00000373474 GORABQ5T7V8 394 aa17.49■□□□□ 0.39
LMX1B-202ENST00000373474 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
LMX1B-202ENST00000373474 EID1Q9Y6B2 187 aa17.48■□□□□ 0.39
LMX1B-202ENST00000373474 TEX35Q5T0J7 233 aa17.48■□□□□ 0.39
LMX1B-202ENST00000373474 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
LMX1B-202ENST00000373474 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
LMX1B-202ENST00000373474 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
LMX1B-202ENST00000373474 FOXD4L5Q5VV16 416 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-202ENST00000373474 FOXD4L4Q8WXT5 416 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-202ENST00000373474 ARAP1Q96P48 1450 aa17.47■□□□□ 0.39
LMX1B-202ENST00000373474 COG3Q96JB2 828 aa17.47■□□□□ 0.39
LMX1B-202ENST00000373474 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
LMX1B-202ENST00000373474 DZIP1LQ8IYY4 767 aaKnown RBP17.46■□□□□ 0.39
LMX1B-202ENST00000373474 RILPL2Q969X0 211 aa17.45■□□□□ 0.38
LMX1B-202ENST00000373474 ZNF330Q9Y3S2 320 aaPredicted RBP17.44■□□□□ 0.38
LMX1B-202ENST00000373474 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
LMX1B-202ENST00000373474 AAMPQ13685 434 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms