RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 STK31Q9BXU1 1019 aa14.94□□□□□ -0.02
DEPDC1-201ENST00000370966 CGNL1Q0VF96 1302 aa14.94□□□□□ -0.02
DEPDC1-201ENST00000370966 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 RRP1P56182 461 aaKnown RBP14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 CENPQQ7L2Z9 268 aaPredicted RBP14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 CLUAP1Q96AJ1 413 aa14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 GBP4Q96PP9 640 aa14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 EVC2Q86UK5 1308 aa14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 MIA2Q96PC5 1412 aa14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 TOP2BQ02880 1626 aa14.93□□□□□ -0.02
DEPDC1-201ENST00000370966 HMMRO75330 724 aa14.92□□□□□ -0.02
DEPDC1-201ENST00000370966 HDAC5Q9UQL6 1122 aa14.92□□□□□ -0.02
DEPDC1-201ENST00000370966 EID1Q9Y6B2 187 aa14.92□□□□□ -0.02
DEPDC1-201ENST00000370966 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
DEPDC1-201ENST00000370966 AQRO60306 1485 aaKnown RBP eCLIP14.92□□□□□ -0.02
DEPDC1-201ENST00000370966 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
DEPDC1-201ENST00000370966 GOLGA6L4A6NEF3 574 aa14.92□□□□□ -0.02
DEPDC1-201ENST00000370966 KIAA1211Q6ZU35 1233 aa14.91□□□□□ -0.02
DEPDC1-201ENST00000370966 CNTLNQ9NXG0 1405 aa14.91□□□□□ -0.02
DEPDC1-201ENST00000370966 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
DEPDC1-201ENST00000370966 CDK11BP21127 795 aaKnown RBP14.9□□□□□ -0.02
DEPDC1-201ENST00000370966 NUTM2DQ5VT03 806 aaPredicted RBP14.9□□□□□ -0.02
DEPDC1-201ENST00000370966 PAK3O75914 559 aaPredicted RBP14.9□□□□□ -0.02
DEPDC1-201ENST00000370966 APBB1O00213 710 aa14.9□□□□□ -0.02
DEPDC1-201ENST00000370966 TPRNQ4KMQ1 711 aa14.9□□□□□ -0.02
DEPDC1-201ENST00000370966 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
DEPDC1-201ENST00000370966 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
DEPDC1-201ENST00000370966 SLKQ9H2G2 1235 aaPredicted RBP14.89□□□□□ -0.03
DEPDC1-201ENST00000370966 NGDNQ8NEJ9 315 aaKnown RBP14.87□□□□□ -0.03
DEPDC1-201ENST00000370966 NAP1L5Q96NT1 182 aaPredicted RBP14.87□□□□□ -0.03
DEPDC1-201ENST00000370966 EXOC6Q8TAG9 804 aa14.87□□□□□ -0.03
DEPDC1-201ENST00000370966 APAF1O14727 1248 aa14.87□□□□□ -0.03
DEPDC1-201ENST00000370966 NRDCO43847 1150 aa14.87□□□□□ -0.03
DEPDC1-201ENST00000370966 WASHC2AQ641Q2 1341 aa14.86□□□□□ -0.03
DEPDC1-201ENST00000370966 PDE4AP27815 886 aa14.86□□□□□ -0.03
DEPDC1-201ENST00000370966 MFAP1P55081 439 aaKnown RBP14.86□□□□□ -0.03
DEPDC1-201ENST00000370966 GOLGA6L6A8MZA4 724 aa14.85□□□□□ -0.03
DEPDC1-201ENST00000370966 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
DEPDC1-201ENST00000370966 ZKSCAN2Q63HK3 967 aa14.85□□□□□ -0.03
DEPDC1-201ENST00000370966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.85□□□□□ -0.03
DEPDC1-201ENST00000370966 RRP7AQ9Y3A4 280 aaKnown RBP14.85□□□□□ -0.03
DEPDC1-201ENST00000370966 USP35Q9P2H5 1018 aa14.85□□□□□ -0.03
DEPDC1-201ENST00000370966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.84□□□□□ -0.03
DEPDC1-201ENST00000370966 NAP1L2Q9ULW6 460 aaPredicted RBP14.84□□□□□ -0.03
DEPDC1-201ENST00000370966 AMPHP49418 695 aa14.84□□□□□ -0.03
DEPDC1-201ENST00000370966 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
DEPDC1-201ENST00000370966 PLIN1O60240 522 aa14.83□□□□□ -0.04
DEPDC1-201ENST00000370966 CRBNQ96SW2 442 aa14.83□□□□□ -0.04
DEPDC1-201ENST00000370966 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
DEPDC1-201ENST00000370966 FANCIQ9NVI1 1328 aa14.83□□□□□ -0.04
DEPDC1-201ENST00000370966 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
DEPDC1-201ENST00000370966 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
DEPDC1-201ENST00000370966 COG3Q96JB2 828 aa14.82□□□□□ -0.04
DEPDC1-201ENST00000370966 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
DEPDC1-201ENST00000370966 MSNP26038 577 aaKnown RBP14.82□□□□□ -0.04
DEPDC1-201ENST00000370966 CSB-PGBD3P0DP91 1061 aa14.81□□□□□ -0.04
DEPDC1-201ENST00000370966 TIAM1Q13009 1591 aa14.81□□□□□ -0.04
DEPDC1-201ENST00000370966 POLA1P09884 1462 aaPredicted RBP14.81□□□□□ -0.04
DEPDC1-201ENST00000370966 NPHP1O15259 732 aa14.8□□□□□ -0.04
DEPDC1-201ENST00000370966 PRKCSHP14314 528 aaPredicted RBP14.8□□□□□ -0.04
DEPDC1-201ENST00000370966 SLC4A10Q6U841 1118 aa14.8□□□□□ -0.04
DEPDC1-201ENST00000370966 SYNJ2O15056 1496 aa14.8□□□□□ -0.04
DEPDC1-201ENST00000370966 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
DEPDC1-201ENST00000370966 GPATCH3Q96I76 525 aa14.79□□□□□ -0.04
DEPDC1-201ENST00000370966 BCL2L13Q9BXK5 485 aa14.79□□□□□ -0.04
DEPDC1-201ENST00000370966 COG6Q9Y2V7 657 aa14.79□□□□□ -0.04
DEPDC1-201ENST00000370966 MINK1Q8N4C8 1332 aaPredicted RBP14.78□□□□□ -0.04
DEPDC1-201ENST00000370966 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
DEPDC1-201ENST00000370966 DIAPH1O60610 1272 aaKnown RBP14.78□□□□□ -0.04
DEPDC1-201ENST00000370966 AAMPQ13685 434 aa14.78□□□□□ -0.04
DEPDC1-201ENST00000370966 RUNDC1Q96C34 613 aa14.78□□□□□ -0.04
DEPDC1-201ENST00000370966 DDX19BQ9UMR2 479 aa14.78□□□□□ -0.04
DEPDC1-201ENST00000370966 TROQ12816 1431 aaPredicted RBP14.77□□□□□ -0.04
DEPDC1-201ENST00000370966 KIAA1107Q9UPP5 1409 aa14.77□□□□□ -0.05
DEPDC1-201ENST00000370966 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
DEPDC1-201ENST00000370966 CHAF1AQ13111 956 aaPredicted RBP14.76□□□□□ -0.05
DEPDC1-201ENST00000370966 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
DEPDC1-201ENST00000370966 HTATSF1O43719 755 aaKnown RBP14.76□□□□□ -0.05
DEPDC1-201ENST00000370966 ST18O60284 1047 aa14.75□□□□□ -0.05
DEPDC1-201ENST00000370966 GZF1Q9H116 711 aaPredicted RBP14.75□□□□□ -0.05
DEPDC1-201ENST00000370966 NESP48681 1621 aa14.75□□□□□ -0.05
DEPDC1-201ENST00000370966 MRC2Q9UBG0 1479 aa14.75□□□□□ -0.05
DEPDC1-201ENST00000370966 NUTM2FA1L443 756 aa14.75□□□□□ -0.05
DEPDC1-201ENST00000370966 GOLGA6L3A6NEY3 463 aa14.75□□□□□ -0.05
DEPDC1-201ENST00000370966 ELL2O00472 640 aaPredicted RBP14.74□□□□□ -0.05
DEPDC1-201ENST00000370966 DZIP1LQ8IYY4 767 aaKnown RBP14.74□□□□□ -0.05
DEPDC1-201ENST00000370966 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.73□□□□□ -0.05
DEPDC1-201ENST00000370966 TAOK2Q9UL54 1235 aa14.73□□□□□ -0.05
DEPDC1-201ENST00000370966 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
DEPDC1-201ENST00000370966 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.73□□□□□ -0.05
DEPDC1-201ENST00000370966 API5Q9BZZ5 524 aaKnown RBP14.73□□□□□ -0.05
DEPDC1-201ENST00000370966 ANKRD45Q5TZF3 282 aa14.73□□□□□ -0.05
DEPDC1-201ENST00000370966 AFAP1Q8N556 730 aa14.73□□□□□ -0.05
DEPDC1-201ENST00000370966 C9orf84Q5VXU9 1444 aa14.72□□□□□ -0.05
DEPDC1-201ENST00000370966 DNMBPQ6XZF7 1577 aa14.72□□□□□ -0.05
DEPDC1-201ENST00000370966 PLEKHH2Q8IVE3 1493 aa14.72□□□□□ -0.05
DEPDC1-201ENST00000370966 ARHGAP5Q13017 1502 aa14.72□□□□□ -0.05
DEPDC1-201ENST00000370966 RIPK4P57078 832 aa14.72□□□□□ -0.05
DEPDC1-201ENST00000370966 NBPF8Q3BBV2 869 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms