RNA–Protein interactions for RNA: ENST00000367512.7

EDEM3-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-202ENST00000367512 HOMER1Q86YM7 354 aa16.55■□□□□ 0.24
EDEM3-202ENST00000367512 FRAT2O75474 233 aaPredicted RBP16.55■□□□□ 0.24
EDEM3-202ENST00000367512 FAM184AQ8NB25 1140 aa16.54■□□□□ 0.24
EDEM3-202ENST00000367512 G3V3G9 751 aa16.54■□□□□ 0.24
EDEM3-202ENST00000367512 DCAF8Q5TAQ9 597 aa16.54■□□□□ 0.24
EDEM3-202ENST00000367512 CCDC70Q6NSX1 233 aa16.54■□□□□ 0.24
EDEM3-202ENST00000367512 PLIN1O60240 522 aa16.53■□□□□ 0.24
EDEM3-202ENST00000367512 RAD21O60216 631 aa16.53■□□□□ 0.24
EDEM3-202ENST00000367512 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
EDEM3-202ENST00000367512 TEX35Q5T0J7 233 aa16.52■□□□□ 0.23
EDEM3-202ENST00000367512 RRP7AQ9Y3A4 280 aaKnown RBP16.51■□□□□ 0.23
EDEM3-202ENST00000367512 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
EDEM3-202ENST00000367512 HMMRO75330 724 aa16.51■□□□□ 0.23
EDEM3-202ENST00000367512 FOSBP53539 338 aa16.51■□□□□ 0.23
EDEM3-202ENST00000367512 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
EDEM3-202ENST00000367512 TPM1P09493 284 aa16.51■□□□□ 0.23
EDEM3-202ENST00000367512 SKIDA1Q1XH10 827 aa16.5■□□□□ 0.23
EDEM3-202ENST00000367512 DHX37Q8IY37 1157 aaKnown RBP16.5■□□□□ 0.23
EDEM3-202ENST00000367512 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
EDEM3-202ENST00000367512 PLCD4Q9BRC7 762 aa16.49■□□□□ 0.23
EDEM3-202ENST00000367512 ANKRD45Q5TZF3 282 aa16.49■□□□□ 0.23
EDEM3-202ENST00000367512 TPM2P07951 284 aa16.48■□□□□ 0.23
EDEM3-202ENST00000367512 PDE4AP27815 886 aa16.48■□□□□ 0.23
EDEM3-202ENST00000367512 LTV1Q96GA3 475 aaPredicted RBP16.48■□□□□ 0.23
EDEM3-202ENST00000367512 CENPJQ9HC77 1338 aaPredicted RBP16.48■□□□□ 0.23
EDEM3-202ENST00000367512 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
EDEM3-202ENST00000367512 APPP05067 770 aa16.47■□□□□ 0.23
EDEM3-202ENST00000367512 MAP7D2Q96T17 732 aa16.46■□□□□ 0.23
EDEM3-202ENST00000367512 SPAG9O60271 1321 aaKnown RBP16.46■□□□□ 0.23
EDEM3-202ENST00000367512 NAP1L1P55209 391 aaKnown RBP16.46■□□□□ 0.23
EDEM3-202ENST00000367512 R3HCC1Q9Y3T6 440 aaKnown RBP16.45■□□□□ 0.22
EDEM3-202ENST00000367512 IFT57Q9NWB7 429 aa16.44■□□□□ 0.22
EDEM3-202ENST00000367512 AKAP17AQ02040 695 aaKnown RBP16.44■□□□□ 0.22
EDEM3-202ENST00000367512 RUFY1Q96T51 708 aa16.44■□□□□ 0.22
EDEM3-202ENST00000367512 KIF3AQ9Y496 699 aa16.44■□□□□ 0.22
EDEM3-202ENST00000367512 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
EDEM3-202ENST00000367512 NUTM2DQ5VT03 806 aaPredicted RBP16.43■□□□□ 0.22
EDEM3-202ENST00000367512 IPO7O95373 1038 aaKnown RBP16.43■□□□□ 0.22
EDEM3-202ENST00000367512 BICD2Q8TD16 824 aa16.43■□□□□ 0.22
EDEM3-202ENST00000367512 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
EDEM3-202ENST00000367512 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
EDEM3-202ENST00000367512 TTLL5Q6EMB2 1281 aa16.42■□□□□ 0.22
EDEM3-202ENST00000367512 CCDC180Q9P1Z9 1646 aa16.42■□□□□ 0.22
EDEM3-202ENST00000367512 GGT6Q6P531 493 aa16.42■□□□□ 0.22
EDEM3-202ENST00000367512 SKOR2Q2VWA4 1001 aaPredicted RBP16.42■□□□□ 0.22
EDEM3-202ENST00000367512 EXOC6Q8TAG9 804 aa16.42■□□□□ 0.22
EDEM3-202ENST00000367512 FAM161AQ3B820 660 aa16.41■□□□□ 0.22
EDEM3-202ENST00000367512 ROCK2O75116 1388 aaKnown RBP16.41■□□□□ 0.22
EDEM3-202ENST00000367512 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
EDEM3-202ENST00000367512 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
EDEM3-202ENST00000367512 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
EDEM3-202ENST00000367512 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
EDEM3-202ENST00000367512 PKD2Q13563 968 aa16.4■□□□□ 0.22
EDEM3-202ENST00000367512 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
EDEM3-202ENST00000367512 H0YHG0 523 aa16.39■□□□□ 0.22
EDEM3-202ENST00000367512 KDM4AO75164 1064 aa16.39■□□□□ 0.22
EDEM3-202ENST00000367512 NOM1Q5C9Z4 860 aaKnown RBP16.39■□□□□ 0.22
EDEM3-202ENST00000367512 RALBP1Q15311 655 aa16.39■□□□□ 0.21
EDEM3-202ENST00000367512 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
EDEM3-202ENST00000367512 AK7Q96M32 723 aa16.39■□□□□ 0.21
EDEM3-202ENST00000367512 ANO2Q9NQ90 1003 aa16.39■□□□□ 0.21
EDEM3-202ENST00000367512 RBM10P98175 930 aaKnown RBP16.39■□□□□ 0.21
EDEM3-202ENST00000367512 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
EDEM3-202ENST00000367512 TCEAL9Q9UHQ7 104 aa16.38■□□□□ 0.21
EDEM3-202ENST00000367512 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
EDEM3-202ENST00000367512 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.38■□□□□ 0.21
EDEM3-202ENST00000367512 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
EDEM3-202ENST00000367512 VPS37CA5D8V6 355 aaPredicted RBP16.37■□□□□ 0.21
EDEM3-202ENST00000367512 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.214e-7■■■■■ 50
EDEM3-202ENST00000367512 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
EDEM3-202ENST00000367512 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
EDEM3-202ENST00000367512 MSH5O43196 834 aa16.36■□□□□ 0.21
EDEM3-202ENST00000367512 DHX16O60231 1041 aaKnown RBP16.36■□□□□ 0.21
EDEM3-202ENST00000367512 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
EDEM3-202ENST00000367512 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
EDEM3-202ENST00000367512 KANK1Q14678 1352 aa16.36■□□□□ 0.21
EDEM3-202ENST00000367512 SYNE3Q6ZMZ3 975 aa16.36■□□□□ 0.21
EDEM3-202ENST00000367512 PDILTQ8N807 584 aa16.36■□□□□ 0.21
EDEM3-202ENST00000367512 DIAPH3Q9NSV4 1193 aa16.35■□□□□ 0.21
EDEM3-202ENST00000367512 RNF214Q8ND24 703 aa16.35■□□□□ 0.21
EDEM3-202ENST00000367512 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
EDEM3-202ENST00000367512 TRIM29Q14134 588 aa16.35■□□□□ 0.21
EDEM3-202ENST00000367512 HSP90B2PQ58FF3 399 aa16.35■□□□□ 0.21
EDEM3-202ENST00000367512 PKNOX2Q96KN3 472 aa16.34■□□□□ 0.21
EDEM3-202ENST00000367512 ANKRD20A12PQ8NF67 263 aa16.34■□□□□ 0.21
EDEM3-202ENST00000367512 ARGLU1Q9NWB6 273 aaPredicted RBP16.34■□□□□ 0.21
EDEM3-202ENST00000367512 SASS6Q6UVJ0 657 aa16.33■□□□□ 0.2
EDEM3-202ENST00000367512 CT47A1Q5JQC4 288 aaPredicted RBP16.33■□□□□ 0.2
EDEM3-202ENST00000367512 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
EDEM3-202ENST00000367512 ZFYVE27Q5T4F4 411 aa16.33■□□□□ 0.2
EDEM3-202ENST00000367512 CCDC191Q8NCU4 936 aa16.32■□□□□ 0.2
EDEM3-202ENST00000367512 RDXP35241 583 aaKnown RBP16.32■□□□□ 0.2
EDEM3-202ENST00000367512 CAGE1Q8TC20 777 aa16.32■□□□□ 0.2
EDEM3-202ENST00000367512 CPLX1O14810 134 aa16.32■□□□□ 0.2
EDEM3-202ENST00000367512 HDGFP51858 240 aaKnown RBP16.32■□□□□ 0.2
EDEM3-202ENST00000367512 AMPHP49418 695 aa16.31■□□□□ 0.2
EDEM3-202ENST00000367512 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
EDEM3-202ENST00000367512 HSP90AB2PQ58FF8 381 aa16.3■□□□□ 0.2
EDEM3-202ENST00000367512 TSPYL1Q9H0U9 437 aa16.3■□□□□ 0.2
EDEM3-202ENST00000367512 CDR1P51861 262 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms