RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 G3V3G9 751 aa15.28■□□□□ 0.04
TPR-201ENST00000367478 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
TPR-201ENST00000367478 RDXP35241 583 aaKnown RBP15.28■□□□□ 0.04
TPR-201ENST00000367478 MAP7D2Q96T17 732 aa15.28■□□□□ 0.04
TPR-201ENST00000367478 HSP90B2PQ58FF3 399 aa15.28■□□□□ 0.04
TPR-201ENST00000367478 CCNB3Q8WWL7 1395 aa15.27■□□□□ 0.04
TPR-201ENST00000367478 VPS53Q5VIR6 699 aa15.27■□□□□ 0.04
TPR-201ENST00000367478 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.03
TPR-201ENST00000367478 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.03
TPR-201ENST00000367478 MYO6Q9UM54 1294 aa15.27■□□□□ 0.03
TPR-201ENST00000367478 CHMP3Q9Y3E7 222 aa15.27■□□□□ 0.03
TPR-201ENST00000367478 TCEAL9Q9UHQ7 104 aa15.26■□□□□ 0.03
TPR-201ENST00000367478 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.26■□□□□ 0.03
TPR-201ENST00000367478 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
TPR-201ENST00000367478 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
TPR-201ENST00000367478 KRI1Q8N9T8 703 aaKnown RBP15.25■□□□□ 0.03
TPR-201ENST00000367478 U2AF1L5P0DN76 240 aaPredicted RBP15.25■□□□□ 0.03
TPR-201ENST00000367478 U2AF1Q01081 240 aaKnown RBP eCLIP15.25■□□□□ 0.036e-7■■■■□ 25.7
TPR-201ENST00000367478 SYNE3Q6ZMZ3 975 aa15.25■□□□□ 0.03
TPR-201ENST00000367478 GSE1Q14687 1217 aa15.25■□□□□ 0.03
TPR-201ENST00000367478 ROCK2O75116 1388 aaKnown RBP15.23■□□□□ 0.03
TPR-201ENST00000367478 TNIKQ9UKE5 1360 aa15.23■□□□□ 0.03
TPR-201ENST00000367478 CCDC173Q0VFZ6 552 aa15.23■□□□□ 0.03
TPR-201ENST00000367478 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
TPR-201ENST00000367478 AMOTL1Q8IY63 956 aa15.23■□□□□ 0.03
TPR-201ENST00000367478 TRIM29Q14134 588 aa15.22■□□□□ 0.03
TPR-201ENST00000367478 ERCC4Q92889 916 aaPredicted RBP15.22■□□□□ 0.03
TPR-201ENST00000367478 CCDC66A2RUB6 948 aa15.21■□□□□ 0.03
TPR-201ENST00000367478 ANO8Q9HCE9 1232 aaPredicted RBP15.21■□□□□ 0.03
TPR-201ENST00000367478 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.03
TPR-201ENST00000367478 RUFY2Q8WXA3 655 aa15.21■□□□□ 0.03
TPR-201ENST00000367478 CENPQQ7L2Z9 268 aaPredicted RBP15.21■□□□□ 0.03
TPR-201ENST00000367478 DIAPH3Q9NSV4 1193 aa15.21■□□□□ 0.03
TPR-201ENST00000367478 ZRSR2Q15696 482 aaKnown RBP15.21■□□□□ 0.02
TPR-201ENST00000367478 REC8O95072 547 aa15.2■□□□□ 0.02
TPR-201ENST00000367478 PCMTD1Q96MG8 357 aaPredicted RBP15.2■□□□□ 0.02
TPR-201ENST00000367478 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
TPR-201ENST00000367478 TERF2IPQ9NYB0 399 aa15.19■□□□□ 0.02
TPR-201ENST00000367478 ZNF592Q92610 1267 aa15.19■□□□□ 0.02
TPR-201ENST00000367478 TOMM22Q9NS69 142 aa15.19■□□□□ 0.02
TPR-201ENST00000367478 ODF2Q5BJF6 829 aa15.19■□□□□ 0.02
TPR-201ENST00000367478 APPP05067 770 aa15.18■□□□□ 0.02
TPR-201ENST00000367478 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
TPR-201ENST00000367478 SOX12O15370 315 aa15.18■□□□□ 0.02
TPR-201ENST00000367478 NAT10Q9H0A0 1025 aaKnown RBP15.18■□□□□ 0.02
TPR-201ENST00000367478 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
TPR-201ENST00000367478 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
TPR-201ENST00000367478 H0YHG0 523 aa15.17■□□□□ 0.02
TPR-201ENST00000367478 CSB-PGBD3P0DP91 1061 aa15.17■□□□□ 0.02
TPR-201ENST00000367478 ZKSCAN1P17029 563 aaPredicted RBP15.17■□□□□ 0.02
TPR-201ENST00000367478 ZNF330Q9Y3S2 320 aaPredicted RBP15.16■□□□□ 0.02
TPR-201ENST00000367478 MNS1Q8NEH6 495 aa15.16■□□□□ 0.02
TPR-201ENST00000367478 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
TPR-201ENST00000367478 CT47A1Q5JQC4 288 aaPredicted RBP15.15■□□□□ 0.02
TPR-201ENST00000367478 SIN3AQ96ST3 1273 aa15.15■□□□□ 0.02
TPR-201ENST00000367478 RNF20Q5VTR2 975 aa15.14■□□□□ 0.01
TPR-201ENST00000367478 FAM43AQ8N2R8 423 aa15.14■□□□□ 0.01
TPR-201ENST00000367478 DHX8Q14562 1220 aaKnown RBP15.14■□□□□ 0.01
TPR-201ENST00000367478 NEXNQ0ZGT2 675 aa15.14■□□□□ 0.01
TPR-201ENST00000367478 ROCK1Q13464 1354 aa15.13■□□□□ 0.01
TPR-201ENST00000367478 CCP110O43303 1012 aa15.13■□□□□ 0.01
TPR-201ENST00000367478 MCTP1Q6DN14 999 aa15.13■□□□□ 0.01
TPR-201ENST00000367478 SASS6Q6UVJ0 657 aa15.13■□□□□ 0.01
TPR-201ENST00000367478 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
TPR-201ENST00000367478 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
TPR-201ENST00000367478 SLC4A10Q6U841 1118 aa15.13■□□□□ 0.01
TPR-201ENST00000367478 NLRP13Q86W25 1043 aa15.13■□□□□ 0.01
TPR-201ENST00000367478 CAGE1Q8TC20 777 aa15.13■□□□□ 0.01
TPR-201ENST00000367478 FAM13BQ9NYF5 915 aa15.13■□□□□ 0.01
TPR-201ENST00000367478 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
TPR-201ENST00000367478 TRIM34Q9BYJ4 488 aa15.12■□□□□ 0.01
TPR-201ENST00000367478 NUCB2P80303 420 aa15.12■□□□□ 0.01
TPR-201ENST00000367478 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
TPR-201ENST00000367478 CGNL1Q0VF96 1302 aa15.12■□□□□ 0.01
TPR-201ENST00000367478 GTF2E1P29083 439 aaPredicted RBP15.11■□□□□ 0.01
TPR-201ENST00000367478 CCDC43Q96MW1 224 aaKnown RBP15.11■□□□□ 0.01
TPR-201ENST00000367478 CPLX1O14810 134 aa15.1■□□□□ 0.01
TPR-201ENST00000367478 GOLGA6L7A0A1B0GV03 622 aa15.1■□□□□ 0.01
TPR-201ENST00000367478 TRDNQ13061 729 aa15.1■□□□□ 0.01
TPR-201ENST00000367478 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■■■□ 26.4
TPR-201ENST00000367478 CTDP1Q9Y5B0 961 aaPredicted RBP15.1■□□□□ 0.01
TPR-201ENST00000367478 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
TPR-201ENST00000367478 HSPA5P11021 654 aaKnown RBP15.1■□□□□ 0.01
TPR-201ENST00000367478 EPS15P42566 896 aa15.09■□□□□ 0.01
TPR-201ENST00000367478 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
TPR-201ENST00000367478 NAP1L1P55209 391 aaKnown RBP15.09■□□□□ 0.01
TPR-201ENST00000367478 WWC1Q8IX03 1113 aa15.09■□□□□ 0.01
TPR-201ENST00000367478 SAFBQ15424 915 aaKnown RBP eCLIP15.09■□□□□ 0.012e-7■□□□□ 9.3
TPR-201ENST00000367478 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
TPR-201ENST00000367478 LETM1O95202 739 aaPredicted RBP15.08■□□□□ 0
TPR-201ENST00000367478 LEKR1Q6ZMV7 388 aa15.08■□□□□ 0
TPR-201ENST00000367478 BICD2Q8TD16 824 aa15.08■□□□□ 0
TPR-201ENST00000367478 NGEFQ8N5V2 710 aa15.08■□□□□ 0
TPR-201ENST00000367478 IFT57Q9NWB7 429 aa15.08■□□□□ 0
TPR-201ENST00000367478 INCENPQ9NQS7 918 aa15.07■□□□□ 0
TPR-201ENST00000367478 CCDC39Q9UFE4 941 aa15.07■□□□□ 0
TPR-201ENST00000367478 KIF15Q9NS87 1388 aa15.07■□□□□ 0
TPR-201ENST00000367478 OLFM4Q6UX06 510 aa15.07■□□□□ 0
TPR-201ENST00000367478 ANKRD18AQ8IVF6 992 aa15.07■□□□□ 0
TPR-201ENST00000367478 ERICH2A1L162 156 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms