RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
CACNA1S-201ENST00000362061 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
CACNA1S-201ENST00000362061 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
CACNA1S-201ENST00000362061 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
CACNA1S-201ENST00000362061 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
CACNA1S-201ENST00000362061 CCDC144AA2RUR9 1427 aa13.29□□□□□ -0.28
CACNA1S-201ENST00000362061 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
CACNA1S-201ENST00000362061 EVC2Q86UK5 1308 aa13.28□□□□□ -0.28
CACNA1S-201ENST00000362061 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.28□□□□□ -0.28
CACNA1S-201ENST00000362061 NGEFQ8N5V2 710 aa13.27□□□□□ -0.29
CACNA1S-201ENST00000362061 TOP2AP11388 1531 aaKnown RBP13.27□□□□□ -0.29
CACNA1S-201ENST00000362061 SPRYD3Q8NCJ5 442 aa13.27□□□□□ -0.29
CACNA1S-201ENST00000362061 GLIPR1L2Q4G1C9 344 aa13.26□□□□□ -0.29
CACNA1S-201ENST00000362061 HSP90B1P14625 803 aaKnown RBP13.26□□□□□ -0.29
CACNA1S-201ENST00000362061 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
CACNA1S-201ENST00000362061 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
CACNA1S-201ENST00000362061 CLUAP1Q96AJ1 413 aa13.24□□□□□ -0.29
CACNA1S-201ENST00000362061 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
CACNA1S-201ENST00000362061 RASSF8Q8NHQ8 419 aa13.24□□□□□ -0.29
CACNA1S-201ENST00000362061 MARCH6O60337 910 aa13.23□□□□□ -0.29
CACNA1S-201ENST00000362061 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
CACNA1S-201ENST00000362061 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
CACNA1S-201ENST00000362061 DRC7Q8IY82 874 aa13.22□□□□□ -0.29
CACNA1S-201ENST00000362061 TRIM34Q9BYJ4 488 aa13.22□□□□□ -0.29
CACNA1S-201ENST00000362061 NEXNQ0ZGT2 675 aa13.22□□□□□ -0.29
CACNA1S-201ENST00000362061 RRP7AQ9Y3A4 280 aaKnown RBP13.21□□□□□ -0.29
CACNA1S-201ENST00000362061 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
CACNA1S-201ENST00000362061 HTATSF1O43719 755 aaKnown RBP13.21□□□□□ -0.29
CACNA1S-201ENST00000362061 CHAF1AQ13111 956 aaPredicted RBP13.21□□□□□ -0.29
CACNA1S-201ENST00000362061 NOL10Q9BSC4 688 aaKnown RBP13.21□□□□□ -0.29
CACNA1S-201ENST00000362061 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
CACNA1S-201ENST00000362061 WIZO95785 1651 aa13.21□□□□□ -0.3
CACNA1S-201ENST00000362061 FBXW7Q969H0 707 aa13.21□□□□□ -0.3
CACNA1S-201ENST00000362061 KIAA2012Q0VF49 1180 aa13.2□□□□□ -0.3
CACNA1S-201ENST00000362061 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
CACNA1S-201ENST00000362061 ST20-MTHFSA0A0A6YYL1 179 aa13.2□□□□□ -0.3
CACNA1S-201ENST00000362061 PMFBP1Q8TBY8 1022 aa13.2□□□□□ -0.3
CACNA1S-201ENST00000362061 CTDP1Q9Y5B0 961 aaPredicted RBP13.2□□□□□ -0.3
CACNA1S-201ENST00000362061 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
CACNA1S-201ENST00000362061 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
CACNA1S-201ENST00000362061 PANK3Q9H999 370 aa13.19□□□□□ -0.3
CACNA1S-201ENST00000362061 RAD21O60216 631 aa13.19□□□□□ -0.3
CACNA1S-201ENST00000362061 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
CACNA1S-201ENST00000362061 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
CACNA1S-201ENST00000362061 NLRP2Q9NX02 1062 aa13.18□□□□□ -0.3
CACNA1S-201ENST00000362061 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
CACNA1S-201ENST00000362061 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
CACNA1S-201ENST00000362061 AMOTL1Q8IY63 956 aa13.17□□□□□ -0.3
CACNA1S-201ENST00000362061 PRM3Q9NNZ6 103 aa13.17□□□□□ -0.3
CACNA1S-201ENST00000362061 PROSER2Q86WR7 435 aaPredicted RBP13.17□□□□□ -0.3
CACNA1S-201ENST00000362061 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
CACNA1S-201ENST00000362061 C9orf78Q9NZ63 289 aaPredicted RBP13.16□□□□□ -0.3
CACNA1S-201ENST00000362061 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
CACNA1S-201ENST00000362061 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
CACNA1S-201ENST00000362061 USP35Q9P2H5 1018 aa13.15□□□□□ -0.3
CACNA1S-201ENST00000362061 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
CACNA1S-201ENST00000362061 NOL8Q76FK4 1167 aaKnown RBP13.14□□□□□ -0.31
CACNA1S-201ENST00000362061 MFAP1P55081 439 aaKnown RBP13.13□□□□□ -0.31
CACNA1S-201ENST00000362061 TXNDC2Q86VQ3 553 aa13.13□□□□□ -0.31
CACNA1S-201ENST00000362061 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.31
CACNA1S-201ENST00000362061 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
CACNA1S-201ENST00000362061 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
CACNA1S-201ENST00000362061 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
CACNA1S-201ENST00000362061 TCEAL9Q9UHQ7 104 aa13.12□□□□□ -0.31
CACNA1S-201ENST00000362061 DHX57Q6P158 1386 aaKnown RBP13.12□□□□□ -0.31
CACNA1S-201ENST00000362061 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
CACNA1S-201ENST00000362061 ESCO1Q5FWF5 840 aa13.12□□□□□ -0.31
CACNA1S-201ENST00000362061 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
CACNA1S-201ENST00000362061 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
CACNA1S-201ENST00000362061 AKAP17AQ02040 695 aaKnown RBP13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 NLRP6P59044 892 aa13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 CREBRFQ8IUR6 639 aa13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 PPP1R1BQ9UD71 204 aaPredicted RBP13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 KIF15Q9NS87 1388 aa13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
CACNA1S-201ENST00000362061 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
CACNA1S-201ENST00000362061 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
CACNA1S-201ENST00000362061 KIF3AQ9Y496 699 aa13.1□□□□□ -0.31
CACNA1S-201ENST00000362061 ERICH6BQ5W0A0 696 aa13.1□□□□□ -0.31
CACNA1S-201ENST00000362061 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
CACNA1S-201ENST00000362061 TPM4P67936 248 aa13.09□□□□□ -0.31
CACNA1S-201ENST00000362061 PDE4CQ08493 712 aa13.09□□□□□ -0.31
CACNA1S-201ENST00000362061 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
CACNA1S-201ENST00000362061 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
CACNA1S-201ENST00000362061 SYNE3Q6ZMZ3 975 aa13.09□□□□□ -0.31
CACNA1S-201ENST00000362061 STRN4Q9NRL3 753 aa13.09□□□□□ -0.31
CACNA1S-201ENST00000362061 KIF16BQ96L93 1317 aa13.09□□□□□ -0.31
CACNA1S-201ENST00000362061 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
CACNA1S-201ENST00000362061 AFAP1Q8N556 730 aa13.08□□□□□ -0.32
CACNA1S-201ENST00000362061 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
CACNA1S-201ENST00000362061 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.32
CACNA1S-201ENST00000362061 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
CACNA1S-201ENST00000362061 APPP05067 770 aa13.08□□□□□ -0.32
CACNA1S-201ENST00000362061 PDE3BQ13370 1112 aa13.08□□□□□ -0.32
CACNA1S-201ENST00000362061 WASHC2AQ641Q2 1341 aa13.08□□□□□ -0.32
CACNA1S-201ENST00000362061 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms