RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 KIF21BO75037 1637 aa17.02■□□□□ 0.32
LDB3-202ENST00000361373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.31
LDB3-202ENST00000361373 ANKRD50Q9ULJ7 1429 aa17.01■□□□□ 0.31
LDB3-202ENST00000361373 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
LDB3-202ENST00000361373 EFCAB5A4FU69 1503 aa17■□□□□ 0.31
LDB3-202ENST00000361373 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
LDB3-202ENST00000361373 TMX4Q9H1E5 349 aaPredicted RBP17■□□□□ 0.31
LDB3-202ENST00000361373 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
LDB3-202ENST00000361373 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
LDB3-202ENST00000361373 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
LDB3-202ENST00000361373 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
LDB3-202ENST00000361373 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
LDB3-202ENST00000361373 NAP1L2Q9ULW6 460 aaPredicted RBP16.98■□□□□ 0.31
LDB3-202ENST00000361373 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
LDB3-202ENST00000361373 PLEKHH2Q8IVE3 1493 aa16.97■□□□□ 0.31
LDB3-202ENST00000361373 GOLGA6L4A6NEF3 574 aa16.97■□□□□ 0.31
LDB3-202ENST00000361373 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
LDB3-202ENST00000361373 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
LDB3-202ENST00000361373 NUTM2FA1L443 756 aa16.96■□□□□ 0.3
LDB3-202ENST00000361373 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.3
LDB3-202ENST00000361373 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
LDB3-202ENST00000361373 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
LDB3-202ENST00000361373 MINK1Q8N4C8 1332 aaPredicted RBP16.94■□□□□ 0.3
LDB3-202ENST00000361373 MIA2Q96PC5 1412 aa16.94■□□□□ 0.3
LDB3-202ENST00000361373 NESP48681 1621 aa16.94■□□□□ 0.3
LDB3-202ENST00000361373 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
LDB3-202ENST00000361373 NRDCO43847 1150 aa16.93■□□□□ 0.3
LDB3-202ENST00000361373 LTV1Q96GA3 475 aaPredicted RBP16.93■□□□□ 0.3
LDB3-202ENST00000361373 ARHGAP5Q13017 1502 aa16.93■□□□□ 0.3
LDB3-202ENST00000361373 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
LDB3-202ENST00000361373 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
LDB3-202ENST00000361373 TAF7LQ5H9L4 462 aa16.92■□□□□ 0.3
LDB3-202ENST00000361373 GORABQ5T7V8 394 aa16.92■□□□□ 0.3
LDB3-202ENST00000361373 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
LDB3-202ENST00000361373 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
LDB3-202ENST00000361373 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
LDB3-202ENST00000361373 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
LDB3-202ENST00000361373 E9PSI1 815 aa16.91■□□□□ 0.3
LDB3-202ENST00000361373 APBB1O00213 710 aa16.91■□□□□ 0.3
LDB3-202ENST00000361373 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
LDB3-202ENST00000361373 GLIPR1L2Q4G1C9 344 aa16.9■□□□□ 0.3
LDB3-202ENST00000361373 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
LDB3-202ENST00000361373 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
LDB3-202ENST00000361373 RRBP1Q9P2E9 1410 aaKnown RBP16.88■□□□□ 0.29
LDB3-202ENST00000361373 PTMSP20962 102 aa16.88■□□□□ 0.29
LDB3-202ENST00000361373 TEFQ10587 303 aa16.88■□□□□ 0.29
LDB3-202ENST00000361373 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
LDB3-202ENST00000361373 AFAP1Q8N556 730 aa16.88■□□□□ 0.29
LDB3-202ENST00000361373 DIAPH1O60610 1272 aaKnown RBP16.87■□□□□ 0.29
LDB3-202ENST00000361373 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
LDB3-202ENST00000361373 EVA1CP58658 441 aa16.87■□□□□ 0.29
LDB3-202ENST00000361373 PSME1Q06323 249 aa16.87■□□□□ 0.29
LDB3-202ENST00000361373 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
LDB3-202ENST00000361373 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
LDB3-202ENST00000361373 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
LDB3-202ENST00000361373 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
LDB3-202ENST00000361373 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
LDB3-202ENST00000361373 GTF2E1P29083 439 aaPredicted RBP16.83■□□□□ 0.29
LDB3-202ENST00000361373 GNL2Q13823 731 aaKnown RBP16.83■□□□□ 0.29
LDB3-202ENST00000361373 KIAA0586Q9BVV6 1533 aa16.83■□□□□ 0.29
LDB3-202ENST00000361373 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.29
LDB3-202ENST00000361373 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
LDB3-202ENST00000361373 ATF3P18847 181 aa16.83■□□□□ 0.28
LDB3-202ENST00000361373 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
LDB3-202ENST00000361373 LAMC3Q9Y6N6 1575 aa16.82■□□□□ 0.28
LDB3-202ENST00000361373 ZBED9Q6R2W3 1325 aa16.82■□□□□ 0.28
LDB3-202ENST00000361373 ZKSCAN2Q63HK3 967 aa16.82■□□□□ 0.28
LDB3-202ENST00000361373 GBP4Q96PP9 640 aa16.81■□□□□ 0.28
LDB3-202ENST00000361373 TTC5Q8N0Z6 440 aa16.81■□□□□ 0.28
LDB3-202ENST00000361373 SLC52A1Q9NWF4 448 aa16.81■□□□□ 0.28
LDB3-202ENST00000361373 ISY1Q9ULR0 285 aaKnown RBP16.81■□□□□ 0.28
LDB3-202ENST00000361373 DNTTIP2Q5QJE6 756 aaKnown RBP16.8■□□□□ 0.28
LDB3-202ENST00000361373 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
LDB3-202ENST00000361373 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
LDB3-202ENST00000361373 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
LDB3-202ENST00000361373 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
LDB3-202ENST00000361373 C9orf84Q5VXU9 1444 aa16.8■□□□□ 0.28
LDB3-202ENST00000361373 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
LDB3-202ENST00000361373 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
LDB3-202ENST00000361373 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
LDB3-202ENST00000361373 API5Q9BZZ5 524 aaKnown RBP16.77■□□□□ 0.28
LDB3-202ENST00000361373 THEMISQ8N1K5 641 aaPredicted RBP16.77■□□□□ 0.28
LDB3-202ENST00000361373 RUNDC1Q96C34 613 aa16.77■□□□□ 0.28
LDB3-202ENST00000361373 CHMP4CQ96CF2 233 aa16.77■□□□□ 0.28
LDB3-202ENST00000361373 G3V3G9 751 aa16.77■□□□□ 0.27
LDB3-202ENST00000361373 DCAF8Q5TAQ9 597 aa16.77■□□□□ 0.27
LDB3-202ENST00000361373 CCDC34Q96HJ3 373 aa16.77■□□□□ 0.27
LDB3-202ENST00000361373 APAF1O14727 1248 aa16.76■□□□□ 0.27
LDB3-202ENST00000361373 L1TD1Q5T7N2 865 aaKnown RBP16.76■□□□□ 0.27
LDB3-202ENST00000361373 CENPQQ7L2Z9 268 aaPredicted RBP16.76■□□□□ 0.27
LDB3-202ENST00000361373 DDX58O95786 925 aaKnown RBP16.75■□□□□ 0.27
LDB3-202ENST00000361373 LRRFIP1Q32MZ4 808 aaKnown RBP16.75■□□□□ 0.27
LDB3-202ENST00000361373 KIF3AQ9Y496 699 aa16.75■□□□□ 0.27
LDB3-202ENST00000361373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.75■□□□□ 0.27
LDB3-202ENST00000361373 KIF7Q2M1P5 1343 aa16.75■□□□□ 0.27
LDB3-202ENST00000361373 WASHC2AQ641Q2 1341 aa16.75■□□□□ 0.27
LDB3-202ENST00000361373 TXNDC2Q86VQ3 553 aa16.74■□□□□ 0.27
LDB3-202ENST00000361373 GNAI1P63096 354 aa16.74■□□□□ 0.27
LDB3-202ENST00000361373 RAPGEF4Q8WZA2 1011 aa16.74■□□□□ 0.27
LDB3-202ENST00000361373 POGZQ7Z3K3 1410 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms