RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 AMOTL1Q8IY63 956 aa13.44□□□□□ -0.26
LDLRAD4-202ENST00000361303 NAP1L5Q96NT1 182 aaPredicted RBP13.44□□□□□ -0.26
LDLRAD4-202ENST00000361303 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
LDLRAD4-202ENST00000361303 NOL10Q9BSC4 688 aaKnown RBP13.44□□□□□ -0.26
LDLRAD4-202ENST00000361303 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
LDLRAD4-202ENST00000361303 CCDC144AA2RUR9 1427 aa13.43□□□□□ -0.26
LDLRAD4-202ENST00000361303 MARCH6O60337 910 aa13.43□□□□□ -0.26
LDLRAD4-202ENST00000361303 FOXD1Q16676 465 aa13.43□□□□□ -0.26
LDLRAD4-202ENST00000361303 TRIM34Q9BYJ4 488 aa13.43□□□□□ -0.26
LDLRAD4-202ENST00000361303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
LDLRAD4-202ENST00000361303 DCAF8L1A6NGE4 600 aa13.42□□□□□ -0.26
LDLRAD4-202ENST00000361303 MSH5O43196 834 aa13.42□□□□□ -0.26
LDLRAD4-202ENST00000361303 SLC4A10Q6U841 1118 aa13.42□□□□□ -0.26
LDLRAD4-202ENST00000361303 COG3Q96JB2 828 aa13.42□□□□□ -0.26
LDLRAD4-202ENST00000361303 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
LDLRAD4-202ENST00000361303 VPS53Q5VIR6 699 aa13.42□□□□□ -0.26
LDLRAD4-202ENST00000361303 WIZO95785 1651 aa13.42□□□□□ -0.26
LDLRAD4-202ENST00000361303 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
LDLRAD4-202ENST00000361303 PRDM2Q13029 1718 aa13.41□□□□□ -0.26
LDLRAD4-202ENST00000361303 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
LDLRAD4-202ENST00000361303 TTC5Q8N0Z6 440 aa13.41□□□□□ -0.26
LDLRAD4-202ENST00000361303 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
LDLRAD4-202ENST00000361303 TOMM22Q9NS69 142 aa13.4□□□□□ -0.26
LDLRAD4-202ENST00000361303 CTDP1Q9Y5B0 961 aaPredicted RBP13.4□□□□□ -0.26
LDLRAD4-202ENST00000361303 PTPRGP23470 1445 aa13.4□□□□□ -0.27
LDLRAD4-202ENST00000361303 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
LDLRAD4-202ENST00000361303 RAB3GAP2Q9H2M9 1393 aa13.39□□□□□ -0.27
LDLRAD4-202ENST00000361303 NUTM2DQ5VT03 806 aaPredicted RBP13.39□□□□□ -0.27
LDLRAD4-202ENST00000361303 TCEAL9Q9UHQ7 104 aa13.39□□□□□ -0.27
LDLRAD4-202ENST00000361303 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
LDLRAD4-202ENST00000361303 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
LDLRAD4-202ENST00000361303 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
LDLRAD4-202ENST00000361303 CYB5RLQ6IPT4 315 aa13.38□□□□□ -0.27
LDLRAD4-202ENST00000361303 TEFQ10587 303 aa13.38□□□□□ -0.27
LDLRAD4-202ENST00000361303 KIF16BQ96L93 1317 aa13.37□□□□□ -0.27
LDLRAD4-202ENST00000361303 CENPJQ9HC77 1338 aaPredicted RBP13.37□□□□□ -0.27
LDLRAD4-202ENST00000361303 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
LDLRAD4-202ENST00000361303 FHOD3Q2V2M9 1422 aa13.37□□□□□ -0.27
LDLRAD4-202ENST00000361303 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
LDLRAD4-202ENST00000361303 TCERG1O14776 1098 aaKnown RBP13.36□□□□□ -0.27
LDLRAD4-202ENST00000361303 AKAP17AQ02040 695 aaKnown RBP13.36□□□□□ -0.27
LDLRAD4-202ENST00000361303 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
LDLRAD4-202ENST00000361303 SPRYD3Q8NCJ5 442 aa13.36□□□□□ -0.27
LDLRAD4-202ENST00000361303 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
LDLRAD4-202ENST00000361303 PSME1Q06323 249 aa13.36□□□□□ -0.27
LDLRAD4-202ENST00000361303 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
LDLRAD4-202ENST00000361303 KIF15Q9NS87 1388 aa13.35□□□□□ -0.27
LDLRAD4-202ENST00000361303 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
LDLRAD4-202ENST00000361303 PHF14O94880 888 aa13.35□□□□□ -0.27
LDLRAD4-202ENST00000361303 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
LDLRAD4-202ENST00000361303 ATF3P18847 181 aa13.34□□□□□ -0.27
LDLRAD4-202ENST00000361303 ST18O60284 1047 aa13.34□□□□□ -0.27
LDLRAD4-202ENST00000361303 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
LDLRAD4-202ENST00000361303 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
LDLRAD4-202ENST00000361303 VPS37DQ86XT2 251 aa13.32□□□□□ -0.28
LDLRAD4-202ENST00000361303 DDX58O95786 925 aaKnown RBP13.32□□□□□ -0.28
LDLRAD4-202ENST00000361303 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD4-202ENST00000361303 KANK4Q5T7N3 995 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD4-202ENST00000361303 KRI1Q8N9T8 703 aaKnown RBP13.32□□□□□ -0.28
LDLRAD4-202ENST00000361303 TPM2P07951 284 aa13.32□□□□□ -0.28
LDLRAD4-202ENST00000361303 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
LDLRAD4-202ENST00000361303 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
LDLRAD4-202ENST00000361303 TPM3P06753 285 aa13.3□□□□□ -0.28
LDLRAD4-202ENST00000361303 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
LDLRAD4-202ENST00000361303 H3BQV1 296 aa13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 SYTL4Q96C24 671 aaPredicted RBP13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 ROCK1Q13464 1354 aa13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 MFAP1P55081 439 aaKnown RBP13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 TPD52L1Q16890 204 aaPredicted RBP13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
LDLRAD4-202ENST00000361303 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
LDLRAD4-202ENST00000361303 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
LDLRAD4-202ENST00000361303 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.28
LDLRAD4-202ENST00000361303 MIA2Q96PC5 1412 aa13.27□□□□□ -0.28
LDLRAD4-202ENST00000361303 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.28
LDLRAD4-202ENST00000361303 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.28
LDLRAD4-202ENST00000361303 MYBBP1AQ9BQG0 1328 aaKnown RBP13.27□□□□□ -0.29
LDLRAD4-202ENST00000361303 ATP6V1DQ9Y5K8 247 aa13.27□□□□□ -0.29
LDLRAD4-202ENST00000361303 ATAD2BQ9ULI0 1458 aa13.27□□□□□ -0.29
LDLRAD4-202ENST00000361303 CUX1P39880 1505 aa13.26□□□□□ -0.29
LDLRAD4-202ENST00000361303 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
LDLRAD4-202ENST00000361303 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
LDLRAD4-202ENST00000361303 GAPVD1Q14C86 1478 aa13.26□□□□□ -0.29
LDLRAD4-202ENST00000361303 TRIM29Q14134 588 aa13.25□□□□□ -0.29
LDLRAD4-202ENST00000361303 CCDC47Q96A33 483 aaKnown RBP13.25□□□□□ -0.29
LDLRAD4-202ENST00000361303 TPM1P09493 284 aa13.25□□□□□ -0.29
LDLRAD4-202ENST00000361303 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
LDLRAD4-202ENST00000361303 MINK1Q8N4C8 1332 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD4-202ENST00000361303 DIAPH3Q9NSV4 1193 aa13.24□□□□□ -0.29
LDLRAD4-202ENST00000361303 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD4-202ENST00000361303 FBXW7Q969H0 707 aa13.24□□□□□ -0.29
LDLRAD4-202ENST00000361303 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
LDLRAD4-202ENST00000361303 RAD21O60216 631 aa13.24□□□□□ -0.29
LDLRAD4-202ENST00000361303 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
LDLRAD4-202ENST00000361303 RILPL2Q969X0 211 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms