RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 CFAP43Q8NDM7 1665 aa12.92□□□□□ -0.34
SIN3A-201ENST00000360439 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
SIN3A-201ENST00000360439 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
SIN3A-201ENST00000360439 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
SIN3A-201ENST00000360439 AAMPQ13685 434 aa12.92□□□□□ -0.34
SIN3A-201ENST00000360439 ANP32BQ92688 251 aaKnown RBP12.92□□□□□ -0.34
SIN3A-201ENST00000360439 TRIM44Q96DX7 344 aaPredicted RBP12.91□□□□□ -0.34
SIN3A-201ENST00000360439 PPM1GO15355 546 aaPredicted RBP12.91□□□□□ -0.34
SIN3A-201ENST00000360439 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
SIN3A-201ENST00000360439 WDR62O43379 1518 aa12.91□□□□□ -0.34
SIN3A-201ENST00000360439 BRPF3Q9ULD4 1205 aa12.9□□□□□ -0.34
SIN3A-201ENST00000360439 CDCA8Q53HL2 280 aa12.9□□□□□ -0.35
SIN3A-201ENST00000360439 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
SIN3A-201ENST00000360439 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
SIN3A-201ENST00000360439 NCOA2Q15596 1464 aa12.89□□□□□ -0.35
SIN3A-201ENST00000360439 CD109Q6YHK3 1445 aa12.89□□□□□ -0.35
SIN3A-201ENST00000360439 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
SIN3A-201ENST00000360439 MAPKBP1O60336 1514 aa12.88□□□□□ -0.35
SIN3A-201ENST00000360439 THOC2Q8NI27 1593 aaKnown RBP12.87□□□□□ -0.35
SIN3A-201ENST00000360439 SOX12O15370 315 aa12.87□□□□□ -0.35
SIN3A-201ENST00000360439 TROQ12816 1431 aaPredicted RBP12.87□□□□□ -0.35
SIN3A-201ENST00000360439 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
SIN3A-201ENST00000360439 ROCK2O75116 1388 aaKnown RBP12.86□□□□□ -0.35
SIN3A-201ENST00000360439 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
SIN3A-201ENST00000360439 CNTLNQ9NXG0 1405 aa12.85□□□□□ -0.35
SIN3A-201ENST00000360439 NUTM2FA1L443 756 aa12.84□□□□□ -0.35
SIN3A-201ENST00000360439 FANCIQ9NVI1 1328 aa12.84□□□□□ -0.35
SIN3A-201ENST00000360439 PTMSP20962 102 aa12.84□□□□□ -0.35
SIN3A-201ENST00000360439 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
SIN3A-201ENST00000360439 CDK13Q14004 1512 aaKnown RBP12.84□□□□□ -0.35
SIN3A-201ENST00000360439 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
SIN3A-201ENST00000360439 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
SIN3A-201ENST00000360439 MIA2Q96PC5 1412 aa12.83□□□□□ -0.36
SIN3A-201ENST00000360439 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
SIN3A-201ENST00000360439 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
SIN3A-201ENST00000360439 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
SIN3A-201ENST00000360439 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
SIN3A-201ENST00000360439 EPRSP07814 1512 aaKnown RBP12.8□□□□□ -0.36
SIN3A-201ENST00000360439 MSH5O43196 834 aa12.8□□□□□ -0.36
SIN3A-201ENST00000360439 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
SIN3A-201ENST00000360439 TMF1P82094 1093 aa12.79□□□□□ -0.36
SIN3A-201ENST00000360439 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
SIN3A-201ENST00000360439 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
SIN3A-201ENST00000360439 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
SIN3A-201ENST00000360439 CCDC144AA2RUR9 1427 aa12.78□□□□□ -0.36
SIN3A-201ENST00000360439 TNNT3P45378 269 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-201ENST00000360439 L3MBTL2Q969R5 705 aa12.78□□□□□ -0.36
SIN3A-201ENST00000360439 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
SIN3A-201ENST00000360439 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
SIN3A-201ENST00000360439 RGS3P49796 1198 aa12.78□□□□□ -0.36
SIN3A-201ENST00000360439 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
SIN3A-201ENST00000360439 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
SIN3A-201ENST00000360439 ANKRD50Q9ULJ7 1429 aa12.77□□□□□ -0.37
SIN3A-201ENST00000360439 RALBP1Q15311 655 aa12.77□□□□□ -0.37
SIN3A-201ENST00000360439 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
SIN3A-201ENST00000360439 POGZQ7Z3K3 1410 aa12.76□□□□□ -0.37
SIN3A-201ENST00000360439 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
SIN3A-201ENST00000360439 NUDCQ9Y266 331 aa12.76□□□□□ -0.37
SIN3A-201ENST00000360439 NAIPQ13075 1403 aa12.75□□□□□ -0.37
SIN3A-201ENST00000360439 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
SIN3A-201ENST00000360439 WWC1Q8IX03 1113 aa12.75□□□□□ -0.37
SIN3A-201ENST00000360439 ASXL2Q76L83 1435 aa12.75□□□□□ -0.37
SIN3A-201ENST00000360439 AEBP1Q8IUX7 1158 aa12.74□□□□□ -0.37
SIN3A-201ENST00000360439 PLEKHH2Q8IVE3 1493 aa12.74□□□□□ -0.37
SIN3A-201ENST00000360439 NGDNQ8NEJ9 315 aaKnown RBP12.74□□□□□ -0.37
SIN3A-201ENST00000360439 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
SIN3A-201ENST00000360439 TXNDC2Q86VQ3 553 aa12.73□□□□□ -0.37
SIN3A-201ENST00000360439 ADAMTS12P58397 1594 aa12.73□□□□□ -0.37
SIN3A-201ENST00000360439 ROCK1Q13464 1354 aa12.73□□□□□ -0.37
SIN3A-201ENST00000360439 E9PSI1 815 aa12.72□□□□□ -0.37
SIN3A-201ENST00000360439 TPRNQ4KMQ1 711 aa12.72□□□□□ -0.37
SIN3A-201ENST00000360439 KTN1Q86UP2 1357 aaKnown RBP12.72□□□□□ -0.37
SIN3A-201ENST00000360439 B4GALNT3Q6L9W6 998 aa12.72□□□□□ -0.37
SIN3A-201ENST00000360439 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
SIN3A-201ENST00000360439 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.37
SIN3A-201ENST00000360439 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.37
SIN3A-201ENST00000360439 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.37
SIN3A-201ENST00000360439 CCDC9Q9Y3X0 531 aaKnown RBP12.71□□□□□ -0.37
SIN3A-201ENST00000360439 C9orf84Q5VXU9 1444 aa12.71□□□□□ -0.37
SIN3A-201ENST00000360439 THEMISQ8N1K5 641 aaPredicted RBP12.7□□□□□ -0.38
SIN3A-201ENST00000360439 WASHC2AQ641Q2 1341 aa12.7□□□□□ -0.38
SIN3A-201ENST00000360439 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
SIN3A-201ENST00000360439 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
SIN3A-201ENST00000360439 GSE1Q14687 1217 aa12.69□□□□□ -0.38
SIN3A-201ENST00000360439 ZHX1Q9UKY1 873 aaPredicted RBP12.68□□□□□ -0.38
SIN3A-201ENST00000360439 NUP160Q12769 1436 aa12.68□□□□□ -0.38
SIN3A-201ENST00000360439 CSB-PGBD3P0DP91 1061 aa12.68□□□□□ -0.38
SIN3A-201ENST00000360439 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
SIN3A-201ENST00000360439 UGGT2Q9NYU1 1516 aa12.68□□□□□ -0.38
SIN3A-201ENST00000360439 FANCAO15360 1455 aa12.67□□□□□ -0.38
SIN3A-201ENST00000360439 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
SIN3A-201ENST00000360439 DENND4BO75064 1496 aaPredicted RBP12.67□□□□□ -0.38
SIN3A-201ENST00000360439 TCERG1O14776 1098 aaKnown RBP12.67□□□□□ -0.38
SIN3A-201ENST00000360439 USP47Q96K76 1375 aa12.67□□□□□ -0.38
SIN3A-201ENST00000360439 ATP10BO94823 1461 aa12.67□□□□□ -0.38
SIN3A-201ENST00000360439 TCOF1Q13428 1488 aaKnown RBP12.67□□□□□ -0.38
SIN3A-201ENST00000360439 U2SURPO15042 1029 aaKnown RBP12.66□□□□□ -0.38
SIN3A-201ENST00000360439 VGLL3A8MV65 326 aa12.66□□□□□ -0.38
SIN3A-201ENST00000360439 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
SIN3A-201ENST00000360439 FAM13BQ9NYF5 915 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms