RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 POLA1P09884 1462 aaPredicted RBP6.16□□□□□ -1.42
SCN3A-202ENST00000360093 MIA2Q96PC5 1412 aa6.16□□□□□ -1.42
SCN3A-202ENST00000360093 HSP90AB1P08238 724 aaKnown RBP6.16□□□□□ -1.42
SCN3A-202ENST00000360093 RGS3P49796 1198 aa6.16□□□□□ -1.42
SCN3A-202ENST00000360093 PEG3Q9GZU2 1588 aa6.16□□□□□ -1.42
SCN3A-202ENST00000360093 PRXQ9BXM0 1461 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 AMPHP49418 695 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 RRBP1Q9P2E9 1410 aaKnown RBP6.15□□□□□ -1.42
SCN3A-202ENST00000360093 ANKRD50Q9ULJ7 1429 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 HSCBQ8IWL3 235 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 USP47Q96K76 1375 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 PRG4Q92954 1404 aaPredicted RBP6.15□□□□□ -1.42
SCN3A-202ENST00000360093 HMMRO75330 724 aa6.15□□□□□ -1.43
SCN3A-202ENST00000360093 BICRAQ9NZM4 1560 aa6.15□□□□□ -1.43
SCN3A-202ENST00000360093 PTMSP20962 102 aa6.15□□□□□ -1.43
SCN3A-202ENST00000360093 GPATCH3Q96I76 525 aa6.15□□□□□ -1.43
SCN3A-202ENST00000360093 FAM69CQ0P6D2 419 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 ST20-MTHFSA0A0A6YYL1 179 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 TMX4Q9H1E5 349 aaPredicted RBP6.14□□□□□ -1.43
SCN3A-202ENST00000360093 TRAK1Q9UPV9 953 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 KIAA1211Q6ZU35 1233 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 GOLGA6L6A8MZA4 724 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 GLIPR1L2Q4G1C9 344 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 NESP48681 1621 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 COG3Q96JB2 828 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 ABCA10Q8WWZ4 1543 aa6.13□□□□□ -1.43
SCN3A-202ENST00000360093 HFM1A2PYH4 1435 aa6.13□□□□□ -1.43
SCN3A-202ENST00000360093 SNAPC4Q5SXM2 1469 aa6.13□□□□□ -1.43
SCN3A-202ENST00000360093 TCERG1O14776 1098 aaKnown RBP6.13□□□□□ -1.43
SCN3A-202ENST00000360093 SMC4Q9NTJ3 1288 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 IQGAP2Q13576 1575 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 B4GALNT3Q6L9W6 998 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 CENPJQ9HC77 1338 aaPredicted RBP6.12□□□□□ -1.43
SCN3A-202ENST00000360093 NRDCO43847 1150 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 ITPRIPQ8IWB1 547 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 PANK3Q9H999 370 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 KIAA0586Q9BVV6 1533 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 TIAM1Q13009 1591 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 TROQ12816 1431 aaPredicted RBP6.12□□□□□ -1.43
SCN3A-202ENST00000360093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCN3A-202ENST00000360093 NOP58Q9Y2X3 529 aaKnown RBP6.12□□□□□ -1.43
SCN3A-202ENST00000360093 SENP3-EIF4A1A0A087X0R7 540 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 ARAP1Q96P48 1450 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 MAGI1Q96QZ7 1491 aaPredicted RBP6.11□□□□□ -1.43
SCN3A-202ENST00000360093 E9PSI1 815 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 GOLGA6L4A6NEF3 574 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 SCAPERQ9BY12 1400 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 PTMAP06454 111 aaKnown RBP6.11□□□□□ -1.43
SCN3A-202ENST00000360093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCN3A-202ENST00000360093 C1orf141Q5JVX7 400 aa6.1□□□□□ -1.43
SCN3A-202ENST00000360093 HTATSF1O43719 755 aaKnown RBP6.1□□□□□ -1.43
SCN3A-202ENST00000360093 NUTM2DQ5VT03 806 aaPredicted RBP6.1□□□□□ -1.43
SCN3A-202ENST00000360093 BIVM-ERCC5R4GMW8 1640 aa6.1□□□□□ -1.43
SCN3A-202ENST00000360093 C9orf84Q5VXU9 1444 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 ZBED9Q6R2W3 1325 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 CHMP4CQ96CF2 233 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 PRKRIP1Q9H875 184 aaPredicted RBP6.09□□□□□ -1.43
SCN3A-202ENST00000360093 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 NAP1L2Q9ULW6 460 aaPredicted RBP6.09□□□□□ -1.43
SCN3A-202ENST00000360093 MAP3K1Q13233 1512 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 GORABQ5T7V8 394 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
SCN3A-202ENST00000360093 WASHC2AQ641Q2 1341 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 ROCK1Q13464 1354 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 KIF14Q15058 1648 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 EVA1CP58658 441 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 PSME1Q06323 249 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 AAMPQ13685 434 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 SLC52A1Q9NWF4 448 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 GBP4Q96PP9 640 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 ZNF644Q9H582 1327 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 LRRFIP1Q32MZ4 808 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 KIAA1107Q9UPP5 1409 aa6.07□□□□□ -1.44
SCN3A-202ENST00000360093 DIAPH1O60610 1272 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC34Q96HJ3 373 aa6.07□□□□□ -1.44
SCN3A-202ENST00000360093 POGZQ7Z3K3 1410 aa6.07□□□□□ -1.44
SCN3A-202ENST00000360093 MINK1Q8N4C8 1332 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 TEFQ10587 303 aa6.07□□□□□ -1.44
SCN3A-202ENST00000360093 GNL2Q13823 731 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 L1TD1Q5T7N2 865 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 EPRSP07814 1512 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 CSPP1Q1MSJ5 1256 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC146Q8IYE0 955 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 RPGRIP1LQ68CZ1 1315 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 CENPQQ7L2Z9 268 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-202ENST00000360093 CNTLNQ9NXG0 1405 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 ATF3P18847 181 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 ZKSCAN2Q63HK3 967 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 KIF3AQ9Y496 699 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 NEXNQ0ZGT2 675 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 SYAP1Q96A49 352 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC7Q96M83 1385 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 ZNF330Q9Y3S2 320 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-202ENST00000360093 DNTTIP2Q5QJE6 756 aaKnown RBP6.05□□□□□ -1.44
SCN3A-202ENST00000360093 RUNDC1Q96C34 613 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 CHMP3Q9Y3E7 222 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 DAPK1P53355 1430 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 SLC4A10Q6U841 1118 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 THEMISQ8N1K5 641 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-202ENST00000360093 TTC5Q8N0Z6 440 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms