RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 POLA1P09884 1462 aaPredicted RBP6.16□□□□□ -1.42
SCN3A-202ENST00000360093 MIA2Q96PC5 1412 aa6.16□□□□□ -1.42
SCN3A-202ENST00000360093 HSP90AB1P08238 724 aaKnown RBP6.16□□□□□ -1.42
SCN3A-202ENST00000360093 RGS3P49796 1198 aa6.16□□□□□ -1.42
SCN3A-202ENST00000360093 PEG3Q9GZU2 1588 aa6.16□□□□□ -1.42
SCN3A-202ENST00000360093 PRXQ9BXM0 1461 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 AMPHP49418 695 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 RRBP1Q9P2E9 1410 aaKnown RBP6.15□□□□□ -1.42
SCN3A-202ENST00000360093 ANKRD50Q9ULJ7 1429 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 HSCBQ8IWL3 235 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 USP47Q96K76 1375 aa6.15□□□□□ -1.42
SCN3A-202ENST00000360093 PRG4Q92954 1404 aaPredicted RBP6.15□□□□□ -1.42
SCN3A-202ENST00000360093 HMMRO75330 724 aa6.15□□□□□ -1.43
SCN3A-202ENST00000360093 BICRAQ9NZM4 1560 aa6.15□□□□□ -1.43
SCN3A-202ENST00000360093 PTMSP20962 102 aa6.15□□□□□ -1.43
SCN3A-202ENST00000360093 GPATCH3Q96I76 525 aa6.15□□□□□ -1.43
SCN3A-202ENST00000360093 FAM69CQ0P6D2 419 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 ST20-MTHFSA0A0A6YYL1 179 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 TMX4Q9H1E5 349 aaPredicted RBP6.14□□□□□ -1.43
SCN3A-202ENST00000360093 TRAK1Q9UPV9 953 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 KIAA1211Q6ZU35 1233 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 GOLGA6L6A8MZA4 724 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 GLIPR1L2Q4G1C9 344 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 NESP48681 1621 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 COG3Q96JB2 828 aa6.14□□□□□ -1.43
SCN3A-202ENST00000360093 ABCA10Q8WWZ4 1543 aa6.13□□□□□ -1.43
SCN3A-202ENST00000360093 HFM1A2PYH4 1435 aa6.13□□□□□ -1.43
SCN3A-202ENST00000360093 SNAPC4Q5SXM2 1469 aa6.13□□□□□ -1.43
SCN3A-202ENST00000360093 TCERG1O14776 1098 aaKnown RBP6.13□□□□□ -1.43
SCN3A-202ENST00000360093 SMC4Q9NTJ3 1288 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 IQGAP2Q13576 1575 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 B4GALNT3Q6L9W6 998 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 CENPJQ9HC77 1338 aaPredicted RBP6.12□□□□□ -1.43
SCN3A-202ENST00000360093 NRDCO43847 1150 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 ITPRIPQ8IWB1 547 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 PANK3Q9H999 370 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 KIAA0586Q9BVV6 1533 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 TIAM1Q13009 1591 aa6.12□□□□□ -1.43
SCN3A-202ENST00000360093 TROQ12816 1431 aaPredicted RBP6.12□□□□□ -1.43
SCN3A-202ENST00000360093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCN3A-202ENST00000360093 NOP58Q9Y2X3 529 aaKnown RBP6.12□□□□□ -1.43
SCN3A-202ENST00000360093 SENP3-EIF4A1A0A087X0R7 540 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 ARAP1Q96P48 1450 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 MAGI1Q96QZ7 1491 aaPredicted RBP6.11□□□□□ -1.43
SCN3A-202ENST00000360093 E9PSI1 815 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 GOLGA6L4A6NEF3 574 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 SCAPERQ9BY12 1400 aa6.11□□□□□ -1.43
SCN3A-202ENST00000360093 PTMAP06454 111 aaKnown RBP6.11□□□□□ -1.43
SCN3A-202ENST00000360093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCN3A-202ENST00000360093 C1orf141Q5JVX7 400 aa6.1□□□□□ -1.43
SCN3A-202ENST00000360093 HTATSF1O43719 755 aaKnown RBP6.1□□□□□ -1.43
SCN3A-202ENST00000360093 NUTM2DQ5VT03 806 aaPredicted RBP6.1□□□□□ -1.43
SCN3A-202ENST00000360093 BIVM-ERCC5R4GMW8 1640 aa6.1□□□□□ -1.43
SCN3A-202ENST00000360093 C9orf84Q5VXU9 1444 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 ZBED9Q6R2W3 1325 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 CHMP4CQ96CF2 233 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 PRKRIP1Q9H875 184 aaPredicted RBP6.09□□□□□ -1.43
SCN3A-202ENST00000360093 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 NAP1L2Q9ULW6 460 aaPredicted RBP6.09□□□□□ -1.43
SCN3A-202ENST00000360093 MAP3K1Q13233 1512 aa6.09□□□□□ -1.43
SCN3A-202ENST00000360093 GORABQ5T7V8 394 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
SCN3A-202ENST00000360093 WASHC2AQ641Q2 1341 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 ROCK1Q13464 1354 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 KIF14Q15058 1648 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 EVA1CP58658 441 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 PSME1Q06323 249 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 AAMPQ13685 434 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 SLC52A1Q9NWF4 448 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 GBP4Q96PP9 640 aa6.08□□□□□ -1.44
SCN3A-202ENST00000360093 ZNF644Q9H582 1327 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 LRRFIP1Q32MZ4 808 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 KIAA1107Q9UPP5 1409 aa6.07□□□□□ -1.44
SCN3A-202ENST00000360093 DIAPH1O60610 1272 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC34Q96HJ3 373 aa6.07□□□□□ -1.44
SCN3A-202ENST00000360093 POGZQ7Z3K3 1410 aa6.07□□□□□ -1.44
SCN3A-202ENST00000360093 MINK1Q8N4C8 1332 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 TEFQ10587 303 aa6.07□□□□□ -1.44
SCN3A-202ENST00000360093 GNL2Q13823 731 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 L1TD1Q5T7N2 865 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 EPRSP07814 1512 aaKnown RBP6.07□□□□□ -1.44
SCN3A-202ENST00000360093 CSPP1Q1MSJ5 1256 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC146Q8IYE0 955 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 RPGRIP1LQ68CZ1 1315 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 CENPQQ7L2Z9 268 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-202ENST00000360093 CNTLNQ9NXG0 1405 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 ATF3P18847 181 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 ZKSCAN2Q63HK3 967 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 KIF3AQ9Y496 699 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 NEXNQ0ZGT2 675 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 SYAP1Q96A49 352 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC7Q96M83 1385 aa6.06□□□□□ -1.44
SCN3A-202ENST00000360093 ZNF330Q9Y3S2 320 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-202ENST00000360093 DNTTIP2Q5QJE6 756 aaKnown RBP6.05□□□□□ -1.44
SCN3A-202ENST00000360093 RUNDC1Q96C34 613 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 CHMP3Q9Y3E7 222 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 DAPK1P53355 1430 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 SLC4A10Q6U841 1118 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 THEMISQ8N1K5 641 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-202ENST00000360093 TTC5Q8N0Z6 440 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms