RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 E9PCH4 1651 aa30.34■■■□□ 2.45
CCSER2-202ENST00000359979 MAST1Q9Y2H9 1570 aa30.33■■■□□ 2.45
CCSER2-202ENST00000359979 B4GALNT3Q6L9W6 998 aa30.33■■■□□ 2.45
CCSER2-202ENST00000359979 ST20-MTHFSA0A0A6YYL1 179 aa30.32■■■□□ 2.44
CCSER2-202ENST00000359979 DCAF11Q8TEB1 546 aa30.32■■■□□ 2.44
CCSER2-202ENST00000359979 BRD4O60885 1362 aaPredicted RBP30.32■■■□□ 2.44
CCSER2-202ENST00000359979 OSCARQ8IYS5 282 aa30.32■■■□□ 2.44
CCSER2-202ENST00000359979 RALBP1Q15311 655 aa30.31■■■□□ 2.44
CCSER2-202ENST00000359979 TMC1Q8TDI8 760 aa30.31■■■□□ 2.44
CCSER2-202ENST00000359979 LRPPRCP42704 1394 aaKnown RBP30.31■■■□□ 2.44
CCSER2-202ENST00000359979 KDM2AQ9Y2K7 1162 aa30.29■■■□□ 2.44
CCSER2-202ENST00000359979 UNC13BO14795 1591 aa30.29■■■□□ 2.44
CCSER2-202ENST00000359979 MYBBP1AQ9BQG0 1328 aaKnown RBP30.28■■■□□ 2.44
CCSER2-202ENST00000359979 PRAG1Q86YV5 1406 aa30.28■■■□□ 2.44
CCSER2-202ENST00000359979 TRPM1Q7Z4N2 1603 aa30.27■■■□□ 2.44
CCSER2-202ENST00000359979 CCDC144AA2RUR9 1427 aa30.27■■■□□ 2.44
CCSER2-202ENST00000359979 CLASP1Q7Z460 1538 aa30.26■■■□□ 2.44
CCSER2-202ENST00000359979 CNGB1Q14028 1251 aaPredicted RBP30.23■■■□□ 2.43
CCSER2-202ENST00000359979 GPRASP1Q5JY77 1395 aa30.22■■■□□ 2.43
CCSER2-202ENST00000359979 SYCP2Q9BX26 1530 aa30.22■■■□□ 2.43
CCSER2-202ENST00000359979 LAMC1P11047 1609 aa30.21■■■□□ 2.43
CCSER2-202ENST00000359979 PLXNC1O60486 1568 aa30.21■■■□□ 2.43
CCSER2-202ENST00000359979 PLEKHH2Q8IVE3 1493 aa30.2■■■□□ 2.42
CCSER2-202ENST00000359979 ARHGAP5Q13017 1502 aa30.18■■■□□ 2.42
CCSER2-202ENST00000359979 IQGAP3Q86VI3 1631 aa30.17■■■□□ 2.42
CCSER2-202ENST00000359979 PLA2R1Q13018 1463 aa30.17■■■□□ 2.42
CCSER2-202ENST00000359979 TTC37Q6PGP7 1564 aa30.17■■■□□ 2.42
CCSER2-202ENST00000359979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.17■■■□□ 2.42
CCSER2-202ENST00000359979 SHROOM2Q13796 1616 aa30.16■■■□□ 2.42
CCSER2-202ENST00000359979 PARD3Q8TEW0 1356 aa30.15■■■□□ 2.42
CCSER2-202ENST00000359979 A2MP01023 1474 aa30.13■■■□□ 2.41
CCSER2-202ENST00000359979 ATP10AO60312 1499 aa30.13■■■□□ 2.41
CCSER2-202ENST00000359979 EIF2AK4Q9P2K8 1649 aaKnown RBP30.12■■■□□ 2.41
CCSER2-202ENST00000359979 PRDM15P57071 1507 aaPredicted RBP30.11■■■□□ 2.41
CCSER2-202ENST00000359979 NLRP13Q86W25 1043 aa30.11■■■□□ 2.41
CCSER2-202ENST00000359979 ERICH6Q7L0X2 663 aa30.1■■■□□ 2.41
CCSER2-202ENST00000359979 WASHC2CQ9Y4E1 1318 aa30.1■■■□□ 2.41
CCSER2-202ENST00000359979 MAGI2Q86UL8 1455 aa30.1■■■□□ 2.41
CCSER2-202ENST00000359979 COL17A1Q9UMD9 1497 aaPredicted RBP30.1■■■□□ 2.41
CCSER2-202ENST00000359979 DUOX2Q9NRD8 1548 aa30.1■■■□□ 2.41
CCSER2-202ENST00000359979 MYO5CQ9NQX4 1742 aa30.1■■■□□ 2.41
CCSER2-202ENST00000359979 ABCC2Q92887 1545 aa30.08■■■□□ 2.41
CCSER2-202ENST00000359979 CCDC136Q96JN2 1154 aa30.08■■■□□ 2.41
CCSER2-202ENST00000359979 ERBINQ96RT1 1412 aa30.06■■■□□ 2.4
CCSER2-202ENST00000359979 INSRP06213 1382 aa30.06■■■□□ 2.4
CCSER2-202ENST00000359979 PER1O15534 1290 aaPredicted RBP30.05■■■□□ 2.4
CCSER2-202ENST00000359979 PDE3BQ13370 1112 aa30.03■■■□□ 2.4
CCSER2-202ENST00000359979 NBPF1Q3BBV0 1214 aa30.03■■■□□ 2.4
CCSER2-202ENST00000359979 ZMYM4Q5VZL5 1548 aa30.03■■■□□ 2.4
CCSER2-202ENST00000359979 RGL3Q3MIN7 710 aa30.02■■■□□ 2.4
CCSER2-202ENST00000359979 ERCC6L2Q5T890 1561 aa30.02■■■□□ 2.4
CCSER2-202ENST00000359979 TESK2Q96S53 571 aa30■■■□□ 2.39
CCSER2-202ENST00000359979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.99■■■□□ 2.392e-6■■■□□ 18.6
CCSER2-202ENST00000359979 RRP1P56182 461 aaKnown RBP29.96■■■□□ 2.39
CCSER2-202ENST00000359979 PLCH2O75038 1416 aa29.96■■■□□ 2.39
CCSER2-202ENST00000359979 DISP3Q9P2K9 1392 aa29.95■■■□□ 2.39
CCSER2-202ENST00000359979 RNF17Q9BXT8 1623 aaKnown RBP29.95■■■□□ 2.38
CCSER2-202ENST00000359979 TMF1P82094 1093 aa29.92■■■□□ 2.38
CCSER2-202ENST00000359979 RCAN3Q9UKA8 241 aa29.91■■■□□ 2.38
CCSER2-202ENST00000359979 SENP3-EIF4A1A0A087X0R7 540 aa29.9■■■□□ 2.38
CCSER2-202ENST00000359979 BLMP54132 1417 aaPredicted RBP29.9■■■□□ 2.38
CCSER2-202ENST00000359979 MYT1LQ9UL68 1186 aa29.89■■■□□ 2.38
CCSER2-202ENST00000359979 ABCC1P33527 1531 aa29.89■■■□□ 2.38
CCSER2-202ENST00000359979 EFCAB2Q5VUJ9 269 aa29.87■■■□□ 2.37
CCSER2-202ENST00000359979 UHRF1BP1LA0JNW5 1464 aa29.87■■■□□ 2.37
CCSER2-202ENST00000359979 PANK3Q9H999 370 aa29.86■■■□□ 2.37
CCSER2-202ENST00000359979 ZCCHC11Q5TAX3 1644 aaKnown RBP29.83■■■□□ 2.37
CCSER2-202ENST00000359979 NOP58Q9Y2X3 529 aaKnown RBP29.83■■■□□ 2.37
CCSER2-202ENST00000359979 STAC3Q96MF2 364 aa29.81■■■□□ 2.36
CCSER2-202ENST00000359979 RTEL1-TNFRSF6BF6WH68 1400 aa29.81■■■□□ 2.36
CCSER2-202ENST00000359979 CC2D1BQ5T0F9 858 aaKnown RBP29.81■■■□□ 2.36
CCSER2-202ENST00000359979 MADDQ8WXG6 1647 aa29.8■■■□□ 2.36
CCSER2-202ENST00000359979 ARAP3Q8WWN8 1544 aa29.8■■■□□ 2.36
CCSER2-202ENST00000359979 TRPM2O94759 1503 aa29.79■■■□□ 2.36
CCSER2-202ENST00000359979 TRAPPC8Q9Y2L5 1435 aa29.78■■■□□ 2.36
CCSER2-202ENST00000359979 ANP32AP39687 249 aaKnown RBP29.78■■■□□ 2.36
CCSER2-202ENST00000359979 EXOC6Q8TAG9 804 aa29.78■■■□□ 2.36
CCSER2-202ENST00000359979 IQGAP1P46940 1657 aa29.78■■■□□ 2.36
CCSER2-202ENST00000359979 WDR7Q9Y4E6 1490 aa29.75■■■□□ 2.35
CCSER2-202ENST00000359979 PTPRTO14522 1441 aa29.74■■■□□ 2.35
CCSER2-202ENST00000359979 SCAPERQ9BY12 1400 aa29.74■■■□□ 2.35
CCSER2-202ENST00000359979 SALL2Q9Y467 1007 aaPredicted RBP29.74■■■□□ 2.35
CCSER2-202ENST00000359979 RIMBP3CA6NJZ7 1639 aa29.73■■■□□ 2.35
CCSER2-202ENST00000359979 RIMBP3BA6NNM3 1639 aa29.73■■■□□ 2.35
CCSER2-202ENST00000359979 RIMBP3Q9UFD9 1639 aa29.73■■■□□ 2.35
CCSER2-202ENST00000359979 SPHKAPQ2M3C7 1700 aa29.73■■■□□ 2.35
CCSER2-202ENST00000359979 TCERG1O14776 1098 aaKnown RBP29.73■■■□□ 2.35
CCSER2-202ENST00000359979 IPO9Q96P70 1041 aaKnown RBP29.73■■■□□ 2.35
CCSER2-202ENST00000359979 CEP152O94986 1710 aa29.72■■■□□ 2.35
CCSER2-202ENST00000359979 ZFYVE16Q7Z3T8 1539 aa29.71■■■□□ 2.35
CCSER2-202ENST00000359979 CDCA8Q53HL2 280 aa29.71■■■□□ 2.35
CCSER2-202ENST00000359979 CDCA7LQ96GN5 454 aa29.71■■■□□ 2.35
CCSER2-202ENST00000359979 DEPDC5O75140 1603 aa29.71■■■□□ 2.35
CCSER2-202ENST00000359979 SPAG9O60271 1321 aaKnown RBP29.71■■■□□ 2.35
CCSER2-202ENST00000359979 SCAF11Q99590 1463 aaKnown RBP29.7■■■□□ 2.34
CCSER2-202ENST00000359979 SYNMO15061 1565 aa29.7■■■□□ 2.34
CCSER2-202ENST00000359979 NEURL4Q96JN8 1562 aa29.66■■■□□ 2.34
CCSER2-202ENST00000359979 BCL11AQ9H165 835 aa29.65■■■□□ 2.34
CCSER2-202ENST00000359979 KNSTRNQ9Y448 316 aa29.65■■■□□ 2.34
CCSER2-202ENST00000359979 TET3O43151 1660 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms