RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TPM3P06753 285 aa10.82□□□□□ -0.68
COL6A6-201ENST00000358511 APBB1O00213 710 aa10.82□□□□□ -0.68
COL6A6-201ENST00000358511 HMMRO75330 724 aa10.82□□□□□ -0.68
COL6A6-201ENST00000358511 SENP3Q9H4L4 574 aaPredicted RBP10.82□□□□□ -0.68
COL6A6-201ENST00000358511 CWC15Q9P013 229 aaKnown RBP10.82□□□□□ -0.68
COL6A6-201ENST00000358511 EIF4G1Q04637 1599 aaKnown RBP10.81□□□□□ -0.68
COL6A6-201ENST00000358511 DIAPH3Q9NSV4 1193 aa10.81□□□□□ -0.68
COL6A6-201ENST00000358511 CCDC39Q9UFE4 941 aa10.81□□□□□ -0.68
COL6A6-201ENST00000358511 TRIM6-TRIM34B2RNG4 842 aa10.8□□□□□ -0.68
COL6A6-201ENST00000358511 APPP05067 770 aa10.8□□□□□ -0.68
COL6A6-201ENST00000358511 EXOC6Q8TAG9 804 aa10.8□□□□□ -0.68
COL6A6-201ENST00000358511 KIF3AQ9Y496 699 aa10.8□□□□□ -0.68
COL6A6-201ENST00000358511 TAF3Q5VWG9 929 aa10.8□□□□□ -0.68
COL6A6-201ENST00000358511 CCDC70Q6NSX1 233 aa10.8□□□□□ -0.68
COL6A6-201ENST00000358511 PRKRIP1Q9H875 184 aaPredicted RBP10.8□□□□□ -0.68
COL6A6-201ENST00000358511 CCDC18Q5T9S5 1454 aa10.8□□□□□ -0.68
COL6A6-201ENST00000358511 KANK1Q14678 1352 aa10.8□□□□□ -0.68
COL6A6-201ENST00000358511 ARGLU1Q9NWB6 273 aaPredicted RBP10.79□□□□□ -0.68
COL6A6-201ENST00000358511 HMGN5P82970 282 aaKnown RBP10.79□□□□□ -0.68
COL6A6-201ENST00000358511 ZNF592Q92610 1267 aa10.79□□□□□ -0.68
COL6A6-201ENST00000358511 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL6A6-201ENST00000358511 CRBNQ96SW2 442 aa10.78□□□□□ -0.68
COL6A6-201ENST00000358511 POGKQ9P215 609 aa10.78□□□□□ -0.68
COL6A6-201ENST00000358511 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
COL6A6-201ENST00000358511 CHMP7Q8WUX9 453 aaPredicted RBP10.78□□□□□ -0.68
COL6A6-201ENST00000358511 MPHOSPH9Q99550 1183 aa10.77□□□□□ -0.68
COL6A6-201ENST00000358511 CCAR2Q8N163 923 aaKnown RBP10.77□□□□□ -0.68
COL6A6-201ENST00000358511 BECN2A8MW95 431 aa10.77□□□□□ -0.69
COL6A6-201ENST00000358511 R3HCC1Q9Y3T6 440 aaKnown RBP10.77□□□□□ -0.69
COL6A6-201ENST00000358511 HSP90B1P14625 803 aaKnown RBP10.77□□□□□ -0.69
COL6A6-201ENST00000358511 U2AF1L5P0DN76 240 aaPredicted RBP10.77□□□□□ -0.69
COL6A6-201ENST00000358511 U2AF1Q01081 240 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL6A6-201ENST00000358511 CCDC173Q0VFZ6 552 aa10.76□□□□□ -0.69
COL6A6-201ENST00000358511 FOXD4L5Q5VV16 416 aaPredicted RBP10.76□□□□□ -0.69
COL6A6-201ENST00000358511 FOXD4L4Q8WXT5 416 aaPredicted RBP10.76□□□□□ -0.69
COL6A6-201ENST00000358511 REC8O95072 547 aa10.76□□□□□ -0.69
COL6A6-201ENST00000358511 NUCB2P80303 420 aa10.76□□□□□ -0.69
COL6A6-201ENST00000358511 TOP2AP11388 1531 aaKnown RBP10.76□□□□□ -0.69
COL6A6-201ENST00000358511 UBE2Q2Q8WVN8 375 aa10.76□□□□□ -0.69
COL6A6-201ENST00000358511 FOXD1Q16676 465 aa10.76□□□□□ -0.69
COL6A6-201ENST00000358511 E9PSI1 815 aa10.75□□□□□ -0.69
COL6A6-201ENST00000358511 PLIN1O60240 522 aa10.75□□□□□ -0.69
COL6A6-201ENST00000358511 NOL8Q76FK4 1167 aaKnown RBP10.75□□□□□ -0.69
COL6A6-201ENST00000358511 CNKSR2Q8WXI2 1034 aa10.75□□□□□ -0.69
COL6A6-201ENST00000358511 CLUAP1Q96AJ1 413 aa10.75□□□□□ -0.69
COL6A6-201ENST00000358511 CUX2O14529 1486 aa10.75□□□□□ -0.69
COL6A6-201ENST00000358511 CNTLNQ9NXG0 1405 aa10.75□□□□□ -0.69
COL6A6-201ENST00000358511 PKD2Q13563 968 aa10.74□□□□□ -0.69
COL6A6-201ENST00000358511 RTF1Q92541 710 aaKnown RBP10.74□□□□□ -0.69
COL6A6-201ENST00000358511 TPM1P09493 284 aa10.74□□□□□ -0.69
COL6A6-201ENST00000358511 IFT57Q9NWB7 429 aa10.74□□□□□ -0.69
COL6A6-201ENST00000358511 USP47Q96K76 1375 aa10.74□□□□□ -0.69
COL6A6-201ENST00000358511 CARMIL1Q5VZK9 1371 aa10.74□□□□□ -0.69
COL6A6-201ENST00000358511 AAMPQ13685 434 aa10.74□□□□□ -0.69
COL6A6-201ENST00000358511 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
COL6A6-201ENST00000358511 ACBD3Q9H3P7 528 aa10.73□□□□□ -0.69
COL6A6-201ENST00000358511 L3MBTL2Q969R5 705 aa10.73□□□□□ -0.69
COL6A6-201ENST00000358511 HSP90B2PQ58FF3 399 aa10.73□□□□□ -0.69
COL6A6-201ENST00000358511 HOMER1Q86YM7 354 aa10.73□□□□□ -0.69
COL6A6-201ENST00000358511 TRAK2O60296 914 aa10.72□□□□□ -0.69
COL6A6-201ENST00000358511 H3BQV1 296 aa10.72□□□□□ -0.69
COL6A6-201ENST00000358511 IFFO2Q5TF58 517 aa10.72□□□□□ -0.69
COL6A6-201ENST00000358511 CCDC146Q8IYE0 955 aa10.72□□□□□ -0.69
COL6A6-201ENST00000358511 CHMP4AQ9BY43 222 aa10.72□□□□□ -0.69
COL6A6-201ENST00000358511 SRPK2P78362 688 aaKnown RBP10.71□□□□□ -0.69
COL6A6-201ENST00000358511 MCTP1Q6DN14 999 aa10.71□□□□□ -0.69
COL6A6-201ENST00000358511 SPAG9O60271 1321 aaKnown RBP10.71□□□□□ -0.69
COL6A6-201ENST00000358511 C22orf23Q9BZE7 217 aa10.71□□□□□ -0.69
COL6A6-201ENST00000358511 FRAT2O75474 233 aaPredicted RBP10.71□□□□□ -0.69
COL6A6-201ENST00000358511 CHMP4CQ96CF2 233 aa10.71□□□□□ -0.69
COL6A6-201ENST00000358511 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.7
COL6A6-201ENST00000358511 HDAC5Q9UQL6 1122 aa10.71□□□□□ -0.7
COL6A6-201ENST00000358511 SF3A1Q15459 793 aaKnown RBP10.7□□□□□ -0.7
COL6A6-201ENST00000358511 CUX1P39880 1505 aa10.7□□□□□ -0.7
COL6A6-201ENST00000358511 ZKSCAN2Q63HK3 967 aa10.7□□□□□ -0.7
COL6A6-201ENST00000358511 ANKRD30AQ9BXX3 1397 aa10.7□□□□□ -0.7
COL6A6-201ENST00000358511 ANKRD45Q5TZF3 282 aa10.7□□□□□ -0.7
COL6A6-201ENST00000358511 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
COL6A6-201ENST00000358511 AK7Q96M32 723 aa10.7□□□□□ -0.7
COL6A6-201ENST00000358511 RAPGEF2Q9Y4G8 1499 aa10.7□□□□□ -0.7
COL6A6-201ENST00000358511 NUP155O75694 1391 aa10.7□□□□□ -0.7
COL6A6-201ENST00000358511 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
COL6A6-201ENST00000358511 STK31Q9BXU1 1019 aa10.69□□□□□ -0.7
COL6A6-201ENST00000358511 DDX19BQ9UMR2 479 aa10.69□□□□□ -0.7
COL6A6-201ENST00000358511 FOXD4L6Q3SYB3 417 aaPredicted RBP10.69□□□□□ -0.7
COL6A6-201ENST00000358511 FOXD4L3Q6VB84 417 aaPredicted RBP10.69□□□□□ -0.7
COL6A6-201ENST00000358511 MNS1Q8NEH6 495 aa10.69□□□□□ -0.7
COL6A6-201ENST00000358511 KAT6BQ8WYB5 2073 aa10.69□□□□□ -0.7
COL6A6-201ENST00000358511 LMOD3Q0VAK6 560 aa10.68□□□□□ -0.7
COL6A6-201ENST00000358511 ROCK1Q13464 1354 aa10.68□□□□□ -0.7
COL6A6-201ENST00000358511 RDXP35241 583 aaKnown RBP10.68□□□□□ -0.7
COL6A6-201ENST00000358511 UQCRHLA0A096LP55 91 aa10.68□□□□□ -0.7
COL6A6-201ENST00000358511 MBD3O95983 291 aa10.68□□□□□ -0.7
COL6A6-201ENST00000358511 UQCRHP07919 91 aa10.68□□□□□ -0.7
COL6A6-201ENST00000358511 KIF21BO75037 1637 aa10.68□□□□□ -0.7
COL6A6-201ENST00000358511 SMARCA2P51531 1590 aa10.68□□□□□ -0.7
COL6A6-201ENST00000358511 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
COL6A6-201ENST00000358511 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
COL6A6-201ENST00000358511 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
COL6A6-201ENST00000358511 RUFY1Q96T51 708 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms