RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 TTLL13PA6NNM8 815 aa5.69□□□□□ -1.5
SMC1B-201ENST00000357450 LAMC1P11047 1609 aa5.69□□□□□ -1.5
SMC1B-201ENST00000357450 ZNF608Q9ULD9 1512 aaPredicted RBP5.69□□□□□ -1.5
SMC1B-201ENST00000357450 PHLDB1Q86UU1 1377 aa5.69□□□□□ -1.5
SMC1B-201ENST00000357450 TIE1P35590 1138 aa5.69□□□□□ -1.5
SMC1B-201ENST00000357450 TRPM1Q7Z4N2 1603 aa5.69□□□□□ -1.5
SMC1B-201ENST00000357450 KIF27Q86VH2 1401 aa5.68□□□□□ -1.5
SMC1B-201ENST00000357450 CARMIL1Q5VZK9 1371 aa5.68□□□□□ -1.5
SMC1B-201ENST00000357450 HSPA2P54652 639 aa5.68□□□□□ -1.5
SMC1B-201ENST00000357450 PRG4Q92954 1404 aaPredicted RBP5.68□□□□□ -1.5
SMC1B-201ENST00000357450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.68□□□□□ -1.5
SMC1B-201ENST00000357450 IER5LQ5T953 404 aa5.68□□□□□ -1.5
SMC1B-201ENST00000357450 MAGI2Q86UL8 1455 aa5.68□□□□□ -1.5
SMC1B-201ENST00000357450 IQGAP1P46940 1657 aa5.68□□□□□ -1.5
SMC1B-201ENST00000357450 GAPVD1Q14C86 1478 aa5.67□□□□□ -1.5
SMC1B-201ENST00000357450 FYCO1Q9BQS8 1478 aa5.67□□□□□ -1.5
SMC1B-201ENST00000357450 TSPY4P0CV99 314 aa5.67□□□□□ -1.5
SMC1B-201ENST00000357450 TSPY10P0CW01 314 aa5.67□□□□□ -1.5
SMC1B-201ENST00000357450 SHPRHQ149N8 1683 aa5.67□□□□□ -1.5
SMC1B-201ENST00000357450 ABCC10Q5T3U5 1492 aa5.67□□□□□ -1.5
SMC1B-201ENST00000357450 IFNLR1Q8IU57 520 aaPredicted RBP5.67□□□□□ -1.5
SMC1B-201ENST00000357450 UNC13BO14795 1591 aa5.67□□□□□ -1.5
SMC1B-201ENST00000357450 TRIM52Q96A61 297 aa5.66□□□□□ -1.5
SMC1B-201ENST00000357450 RAPGEF3O95398 923 aa5.66□□□□□ -1.5
SMC1B-201ENST00000357450 CHD1O14646 1710 aa5.66□□□□□ -1.5
SMC1B-201ENST00000357450 KIF3CO14782 793 aa5.66□□□□□ -1.5
SMC1B-201ENST00000357450 KANK4Q5T7N3 995 aaPredicted RBP5.66□□□□□ -1.5
SMC1B-201ENST00000357450 LMOD2Q6P5Q4 547 aa5.66□□□□□ -1.5
SMC1B-201ENST00000357450 MAP3K13O43283 966 aa5.66□□□□□ -1.5
SMC1B-201ENST00000357450 VWDEQ8N2E2 1590 aa5.65□□□□□ -1.5
SMC1B-201ENST00000357450 IFNL1Q8IU54 200 aa5.65□□□□□ -1.5
SMC1B-201ENST00000357450 RNF25Q96BH1 459 aaPredicted RBP5.65□□□□□ -1.5
SMC1B-201ENST00000357450 CAMSAP1Q5T5Y3 1602 aa5.65□□□□□ -1.51
SMC1B-201ENST00000357450 MARF1Q9Y4F3 1742 aaKnown RBP5.64□□□□□ -1.51
SMC1B-201ENST00000357450 MEX3CQ5U5Q3 659 aaKnown RBP5.64□□□□□ -1.51
SMC1B-201ENST00000357450 CHIC2Q9UKJ5 165 aa5.64□□□□□ -1.51
SMC1B-201ENST00000357450 EFCAB2Q5VUJ9 269 aa5.64□□□□□ -1.51
SMC1B-201ENST00000357450 PREX2Q70Z35 1606 aa5.64□□□□□ -1.51
SMC1B-201ENST00000357450 CFDP1Q9UEE9 299 aaPredicted RBP5.63□□□□□ -1.51
SMC1B-201ENST00000357450 MROH2AA6NES4 1674 aa5.63□□□□□ -1.51
SMC1B-201ENST00000357450 UBAP1LF5GYI3 381 aa5.63□□□□□ -1.51
SMC1B-201ENST00000357450 INO80Q9ULG1 1556 aaPredicted RBP5.63□□□□□ -1.51
SMC1B-201ENST00000357450 ABCA6Q8N139 1617 aa5.63□□□□□ -1.51
SMC1B-201ENST00000357450 HOXB3P14651 431 aaPredicted RBP5.63□□□□□ -1.51
SMC1B-201ENST00000357450 MAST1Q9Y2H9 1570 aa5.63□□□□□ -1.51
SMC1B-201ENST00000357450 ZNF326Q5BKZ1 582 aaKnown RBP5.62□□□□□ -1.51
SMC1B-201ENST00000357450 MYO3AQ8NEV4 1616 aa5.62□□□□□ -1.51
SMC1B-201ENST00000357450 ITSN2Q9NZM3 1697 aa5.62□□□□□ -1.51
SMC1B-201ENST00000357450 ZBTB7CA1YPR0 619 aa5.62□□□□□ -1.51
SMC1B-201ENST00000357450 ERCC6L2Q5T890 1561 aa5.61□□□□□ -1.51
SMC1B-201ENST00000357450 DISP3Q9P2K9 1392 aa5.61□□□□□ -1.51
SMC1B-201ENST00000357450 SPHKAPQ2M3C7 1700 aa5.61□□□□□ -1.51
SMC1B-201ENST00000357450 PZPP20742 1482 aa5.61□□□□□ -1.51
SMC1B-201ENST00000357450 CASKIN1Q8WXD9 1431 aa5.61□□□□□ -1.51
SMC1B-201ENST00000357450 CEBPAP49715 358 aaPredicted RBP5.61□□□□□ -1.51
SMC1B-201ENST00000357450 MS4A4AQ96JQ5 239 aa5.61□□□□□ -1.51
SMC1B-201ENST00000357450 CCDC9Q9Y3X0 531 aaKnown RBP5.61□□□□□ -1.51
SMC1B-201ENST00000357450 SAMD9LQ8IVG5 1584 aa5.61□□□□□ -1.51
SMC1B-201ENST00000357450 NUP153P49790 1475 aaKnown RBP5.61□□□□□ -1.51
SMC1B-201ENST00000357450 CLASP1Q7Z460 1538 aa5.6□□□□□ -1.51
SMC1B-201ENST00000357450 C7P10643 843 aa5.6□□□□□ -1.51
SMC1B-201ENST00000357450 RAPGEF6Q8TEU7 1601 aa5.6□□□□□ -1.51
SMC1B-201ENST00000357450 NAIPQ13075 1403 aa5.59□□□□□ -1.51
SMC1B-201ENST00000357450 MTUS2Q5JR59 1369 aa5.59□□□□□ -1.51
SMC1B-201ENST00000357450 AKNAQ7Z591 1439 aa5.59□□□□□ -1.51
SMC1B-201ENST00000357450 POLR3GLQ9BT43 218 aa5.59□□□□□ -1.51
SMC1B-201ENST00000357450 NEUROD1Q13562 356 aa5.59□□□□□ -1.52
SMC1B-201ENST00000357450 NEURL4Q96JN8 1562 aa5.58□□□□□ -1.52
SMC1B-201ENST00000357450 IQGAP3Q86VI3 1631 aa5.58□□□□□ -1.52
SMC1B-201ENST00000357450 ADGRL2O95490 1459 aa5.58□□□□□ -1.52
SMC1B-201ENST00000357450 ZRANB1Q9UGI0 708 aa5.58□□□□□ -1.52
SMC1B-201ENST00000357450 TTC37Q6PGP7 1564 aa5.58□□□□□ -1.52
SMC1B-201ENST00000357450 KIF3BO15066 747 aa5.58□□□□□ -1.52
SMC1B-201ENST00000357450 PIK3C2BO00750 1634 aa5.58□□□□□ -1.52
SMC1B-201ENST00000357450 TMEM92Q6UXU6 159 aa5.57□□□□□ -1.52
SMC1B-201ENST00000357450 FBXO22Q8NEZ5 403 aa5.57□□□□□ -1.52
SMC1B-201ENST00000357450 KRTAP3-3Q9BYR6 98 aa5.57□□□□□ -1.52
SMC1B-201ENST00000357450 KRTAP3-2Q9BYR7 98 aa5.57□□□□□ -1.52
SMC1B-201ENST00000357450 ZNF518AQ6AHZ1 1483 aa5.57□□□□□ -1.52
SMC1B-201ENST00000357450 PLXNC1O60486 1568 aa5.57□□□□□ -1.52
SMC1B-201ENST00000357450 PCDH10Q9P2E7 1040 aa5.56□□□□□ -1.52
SMC1B-201ENST00000357450 EID1Q9Y6B2 187 aa5.56□□□□□ -1.52
SMC1B-201ENST00000357450 ABCA9Q8IUA7 1624 aa5.56□□□□□ -1.52
SMC1B-201ENST00000357450 FHAD1B1AJZ9 1412 aa5.56□□□□□ -1.52
SMC1B-201ENST00000357450 SLC39A7Q92504 469 aa5.56□□□□□ -1.52
SMC1B-201ENST00000357450 HFM1A2PYH4 1435 aa5.56□□□□□ -1.52
SMC1B-201ENST00000357450 WASHC2CQ9Y4E1 1318 aa5.56□□□□□ -1.52
SMC1B-201ENST00000357450 NUTM2BA6NNL0 878 aaPredicted RBP5.56□□□□□ -1.52
SMC1B-201ENST00000357450 NUTM2EB1AL46 878 aaPredicted RBP5.56□□□□□ -1.52
SMC1B-201ENST00000357450 CNGB1Q14028 1251 aaPredicted RBP5.56□□□□□ -1.52
SMC1B-201ENST00000357450 NUTM2AQ8IVF1 878 aaPredicted RBP5.56□□□□□ -1.52
SMC1B-201ENST00000357450 MYO5BQ9ULV0 1848 aa5.56□□□□□ -1.52
SMC1B-201ENST00000357450 HNRNPMP52272 730 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMC1B-201ENST00000357450 SYNJ2O15056 1496 aa5.55□□□□□ -1.52
SMC1B-201ENST00000357450 KIAA1210Q9ULL0 1709 aa5.55□□□□□ -1.52
SMC1B-201ENST00000357450 SPAG9O60271 1321 aaKnown RBP5.55□□□□□ -1.52
SMC1B-201ENST00000357450 ARHGEF5Q12774 1597 aa5.55□□□□□ -1.52
SMC1B-201ENST00000357450 PCNTO95613 3336 aa5.55□□□□□ -1.52
SMC1B-201ENST00000357450 USP34Q70CQ2 3546 aa5.54□□□□□ -1.52
SMC1B-201ENST00000357450 AFAP1Q8N556 730 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms