RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 CHMP3Q9Y3E7 222 aa9.74□□□□□ -0.85
VANGL1-202ENST00000355485 SOGA1O94964 1423 aa9.73□□□□□ -0.85
VANGL1-202ENST00000355485 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
VANGL1-202ENST00000355485 SKOR2Q2VWA4 1001 aaPredicted RBP9.73□□□□□ -0.85
VANGL1-202ENST00000355485 MORC1Q86VD1 984 aa9.73□□□□□ -0.85
VANGL1-202ENST00000355485 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
VANGL1-202ENST00000355485 TRIM6-TRIM34B2RNG4 842 aa9.73□□□□□ -0.85
VANGL1-202ENST00000355485 FBXW7Q969H0 707 aa9.72□□□□□ -0.85
VANGL1-202ENST00000355485 CDCA8Q53HL2 280 aa9.72□□□□□ -0.85
VANGL1-202ENST00000355485 CHMP5Q9NZZ3 219 aa9.72□□□□□ -0.85
VANGL1-202ENST00000355485 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
VANGL1-202ENST00000355485 CSPP1Q1MSJ5 1256 aa9.72□□□□□ -0.85
VANGL1-202ENST00000355485 RNF214Q8ND24 703 aa9.72□□□□□ -0.85
VANGL1-202ENST00000355485 SMC4Q9NTJ3 1288 aa9.72□□□□□ -0.85
VANGL1-202ENST00000355485 KIF27Q86VH2 1401 aa9.72□□□□□ -0.85
VANGL1-202ENST00000355485 VPS53Q5VIR6 699 aa9.71□□□□□ -0.85
VANGL1-202ENST00000355485 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.85
VANGL1-202ENST00000355485 TRAK2O60296 914 aa9.71□□□□□ -0.85
VANGL1-202ENST00000355485 VPS8Q8N3P4 1428 aa9.71□□□□□ -0.85
VANGL1-202ENST00000355485 DHX57Q6P158 1386 aaKnown RBP9.71□□□□□ -0.85
VANGL1-202ENST00000355485 SOX12O15370 315 aa9.71□□□□□ -0.86
VANGL1-202ENST00000355485 UQCRHLA0A096LP55 91 aa9.71□□□□□ -0.86
VANGL1-202ENST00000355485 UQCRHP07919 91 aa9.71□□□□□ -0.86
VANGL1-202ENST00000355485 MRE11P49959 708 aa9.71□□□□□ -0.86
VANGL1-202ENST00000355485 TRIM34Q9BYJ4 488 aa9.71□□□□□ -0.86
VANGL1-202ENST00000355485 TAF7LQ5H9L4 462 aa9.7□□□□□ -0.86
VANGL1-202ENST00000355485 TPM4P67936 248 aa9.7□□□□□ -0.86
VANGL1-202ENST00000355485 SAFB2Q14151 953 aaKnown RBP eCLIP9.7□□□□□ -0.86
VANGL1-202ENST00000355485 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
VANGL1-202ENST00000355485 CENPJQ9HC77 1338 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-202ENST00000355485 KIAA1211Q6ZU35 1233 aa9.69□□□□□ -0.86
VANGL1-202ENST00000355485 RALBP1Q15311 655 aa9.69□□□□□ -0.86
VANGL1-202ENST00000355485 NASPP49321 788 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-202ENST00000355485 AEBP1Q8IUX7 1158 aa9.69□□□□□ -0.86
VANGL1-202ENST00000355485 MAP3K9P80192 1104 aa9.69□□□□□ -0.86
VANGL1-202ENST00000355485 PHF14O94880 888 aa9.69□□□□□ -0.86
VANGL1-202ENST00000355485 ZHX1Q9UKY1 873 aaPredicted RBP9.69□□□□□ -0.86
VANGL1-202ENST00000355485 DHX37Q8IY37 1157 aaKnown RBP9.69□□□□□ -0.86
VANGL1-202ENST00000355485 ANKRD45Q5TZF3 282 aa9.69□□□□□ -0.86
VANGL1-202ENST00000355485 CHMP4AQ9BY43 222 aa9.68□□□□□ -0.86
VANGL1-202ENST00000355485 ZBED9Q6R2W3 1325 aa9.68□□□□□ -0.86
VANGL1-202ENST00000355485 SKAP1Q86WV1 359 aa9.68□□□□□ -0.86
VANGL1-202ENST00000355485 CBX1P83916 185 aa9.68□□□□□ -0.86
VANGL1-202ENST00000355485 TEX35Q5T0J7 233 aa9.68□□□□□ -0.86
VANGL1-202ENST00000355485 GORABQ5T7V8 394 aa9.68□□□□□ -0.86
VANGL1-202ENST00000355485 SKIDA1Q1XH10 827 aa9.67□□□□□ -0.86
VANGL1-202ENST00000355485 PRKRIP1Q9H875 184 aaPredicted RBP9.67□□□□□ -0.86
VANGL1-202ENST00000355485 RRP9O43818 475 aaKnown RBP9.67□□□□□ -0.86
VANGL1-202ENST00000355485 ERICH4A6NGS2 130 aa9.67□□□□□ -0.86
VANGL1-202ENST00000355485 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
VANGL1-202ENST00000355485 ST18O60284 1047 aa9.67□□□□□ -0.86
VANGL1-202ENST00000355485 IFT57Q9NWB7 429 aa9.67□□□□□ -0.86
VANGL1-202ENST00000355485 U2AF1L5P0DN76 240 aaPredicted RBP9.67□□□□□ -0.86
VANGL1-202ENST00000355485 U2AF1Q01081 240 aaKnown RBP eCLIP9.67□□□□□ -0.86
VANGL1-202ENST00000355485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.67□□□□□ -0.86
VANGL1-202ENST00000355485 MARCH6O60337 910 aa9.66□□□□□ -0.86
VANGL1-202ENST00000355485 CCDC39Q9UFE4 941 aa9.66□□□□□ -0.86
VANGL1-202ENST00000355485 L3MBTL2Q969R5 705 aa9.66□□□□□ -0.86
VANGL1-202ENST00000355485 FBXO3Q9UK99 471 aa9.66□□□□□ -0.86
VANGL1-202ENST00000355485 POGKQ9P215 609 aa9.66□□□□□ -0.86
VANGL1-202ENST00000355485 WASHC2AQ641Q2 1341 aa9.66□□□□□ -0.86
VANGL1-202ENST00000355485 IPO8O15397 1037 aaKnown RBP9.65□□□□□ -0.86
VANGL1-202ENST00000355485 HTATSF1O43719 755 aaKnown RBP9.65□□□□□ -0.86
VANGL1-202ENST00000355485 CALRP27797 417 aaKnown RBP9.65□□□□□ -0.86
VANGL1-202ENST00000355485 RILPL2Q969X0 211 aa9.65□□□□□ -0.86
VANGL1-202ENST00000355485 WWC2Q6AWC2 1192 aa9.65□□□□□ -0.86
VANGL1-202ENST00000355485 CAVIN1Q6NZI2 390 aaKnown RBP9.65□□□□□ -0.86
VANGL1-202ENST00000355485 RASSF8Q8NHQ8 419 aa9.65□□□□□ -0.86
VANGL1-202ENST00000355485 CFDP1Q9UEE9 299 aaPredicted RBP9.65□□□□□ -0.86
VANGL1-202ENST00000355485 MPHOSPH9Q99550 1183 aa9.65□□□□□ -0.86
VANGL1-202ENST00000355485 KIF16BQ96L93 1317 aa9.65□□□□□ -0.86
VANGL1-202ENST00000355485 TRERF1Q96PN7 1200 aa9.65□□□□□ -0.87
VANGL1-202ENST00000355485 MAP7D2Q96T17 732 aa9.64□□□□□ -0.87
VANGL1-202ENST00000355485 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
VANGL1-202ENST00000355485 GOLGA6L19H0YKK7 550 aa9.64□□□□□ -0.87
VANGL1-202ENST00000355485 SLC4A10Q6U841 1118 aa9.64□□□□□ -0.87
VANGL1-202ENST00000355485 FOSBP53539 338 aa9.64□□□□□ -0.87
VANGL1-202ENST00000355485 GRPEL1Q9HAV7 217 aa9.64□□□□□ -0.87
VANGL1-202ENST00000355485 TPD52L1Q16890 204 aaPredicted RBP9.64□□□□□ -0.87
VANGL1-202ENST00000355485 HOMER1Q86YM7 354 aa9.64□□□□□ -0.87
VANGL1-202ENST00000355485 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
VANGL1-202ENST00000355485 PKD2Q13563 968 aa9.63□□□□□ -0.87
VANGL1-202ENST00000355485 ROCK2O75116 1388 aaKnown RBP9.63□□□□□ -0.87
VANGL1-202ENST00000355485 GTF2E1P29083 439 aaPredicted RBP9.63□□□□□ -0.87
VANGL1-202ENST00000355485 CSB-PGBD3P0DP91 1061 aa9.63□□□□□ -0.87
VANGL1-202ENST00000355485 PAF1Q8N7H5 531 aa9.63□□□□□ -0.87
VANGL1-202ENST00000355485 SPC24Q8NBT2 197 aa9.63□□□□□ -0.87
VANGL1-202ENST00000355485 C22orf23Q9BZE7 217 aa9.63□□□□□ -0.87
VANGL1-202ENST00000355485 AMOTL1Q8IY63 956 aa9.62□□□□□ -0.87
VANGL1-202ENST00000355485 ELL2O00472 640 aaPredicted RBP9.62□□□□□ -0.87
VANGL1-202ENST00000355485 CCDC173Q0VFZ6 552 aa9.62□□□□□ -0.87
VANGL1-202ENST00000355485 MYBBP1AQ9BQG0 1328 aaKnown RBP9.62□□□□□ -0.87
VANGL1-202ENST00000355485 BECN2A8MW95 431 aa9.62□□□□□ -0.87
VANGL1-202ENST00000355485 RRP12Q5JTH9 1297 aaKnown RBP9.61□□□□□ -0.87
VANGL1-202ENST00000355485 AKNAQ7Z591 1439 aa9.61□□□□□ -0.87
VANGL1-202ENST00000355485 NOL10Q9BSC4 688 aaKnown RBP9.61□□□□□ -0.87
VANGL1-202ENST00000355485 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
VANGL1-202ENST00000355485 CCAR1Q8IX12 1150 aaKnown RBP9.61□□□□□ -0.87
VANGL1-202ENST00000355485 PES1O00541 588 aaKnown RBP9.61□□□□□ -0.87
VANGL1-202ENST00000355485 PRPF40AO75400 957 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms