RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 MAST1Q9Y2H9 1570 aa30.01■■■□□ 2.4
NKX2-4-201ENST00000351817 POLR3GLQ9BT43 218 aa30.01■■■□□ 2.39
NKX2-4-201ENST00000351817 PPP4R2Q9NY27 417 aa30■■■□□ 2.39
NKX2-4-201ENST00000351817 ANP32EQ9BTT0 268 aa29.99■■■□□ 2.39
NKX2-4-201ENST00000351817 PLCH2O75038 1416 aa29.99■■■□□ 2.39
NKX2-4-201ENST00000351817 FAM135AQ9P2D6 1515 aa29.99■■■□□ 2.39
NKX2-4-201ENST00000351817 PLEKHH2Q8IVE3 1493 aa29.97■■■□□ 2.39
NKX2-4-201ENST00000351817 KDM2AQ9Y2K7 1162 aa29.94■■■□□ 2.38
NKX2-4-201ENST00000351817 DCAF11Q8TEB1 546 aa29.93■■■□□ 2.38
NKX2-4-201ENST00000351817 UNC13BO14795 1591 aa29.91■■■□□ 2.38
NKX2-4-201ENST00000351817 SMG6Q86US8 1419 aaKnown RBP29.9■■■□□ 2.38
NKX2-4-201ENST00000351817 PLXNC1O60486 1568 aa29.9■■■□□ 2.38
NKX2-4-201ENST00000351817 ST20-MTHFSA0A0A6YYL1 179 aa29.88■■■□□ 2.37
NKX2-4-201ENST00000351817 ABCC1P33527 1531 aa29.87■■■□□ 2.37
NKX2-4-201ENST00000351817 EFCAB2Q5VUJ9 269 aa29.87■■■□□ 2.37
NKX2-4-201ENST00000351817 CCDC144AA2RUR9 1427 aa29.86■■■□□ 2.37
NKX2-4-201ENST00000351817 E9PCH4 1651 aa29.85■■■□□ 2.37
NKX2-4-201ENST00000351817 TRPM1Q7Z4N2 1603 aa29.85■■■□□ 2.37
NKX2-4-201ENST00000351817 CNGB1Q14028 1251 aaPredicted RBP29.85■■■□□ 2.37
NKX2-4-201ENST00000351817 WDR7Q9Y4E6 1490 aa29.85■■■□□ 2.37
NKX2-4-201ENST00000351817 KTN1Q86UP2 1357 aaKnown RBP29.85■■■□□ 2.37
NKX2-4-201ENST00000351817 PRAG1Q86YV5 1406 aa29.82■■■□□ 2.36
NKX2-4-201ENST00000351817 PNISRQ8TF01 805 aaKnown RBP29.82■■■□□ 2.36
NKX2-4-201ENST00000351817 ARAP3Q8WWN8 1544 aa29.82■■■□□ 2.36
NKX2-4-201ENST00000351817 TMC1Q8TDI8 760 aa29.8■■■□□ 2.36
NKX2-4-201ENST00000351817 NUDCQ9Y266 331 aa29.8■■■□□ 2.36
NKX2-4-201ENST00000351817 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
NKX2-4-201ENST00000351817 IQGAP3Q86VI3 1631 aa29.8■■■□□ 2.36
NKX2-4-201ENST00000351817 TRAPPC8Q9Y2L5 1435 aa29.79■■■□□ 2.36
NKX2-4-201ENST00000351817 DUOX2Q9NRD8 1548 aa29.78■■■□□ 2.36
NKX2-4-201ENST00000351817 RALBP1Q15311 655 aa29.77■■■□□ 2.36
NKX2-4-201ENST00000351817 BRD4O60885 1362 aaPredicted RBP29.77■■■□□ 2.36
NKX2-4-201ENST00000351817 PLA2R1Q13018 1463 aa29.76■■■□□ 2.36
NKX2-4-201ENST00000351817 MYBBP1AQ9BQG0 1328 aaKnown RBP29.75■■■□□ 2.35
NKX2-4-201ENST00000351817 LAMC1P11047 1609 aa29.74■■■□□ 2.35
NKX2-4-201ENST00000351817 ABCA9Q8IUA7 1624 aa29.74■■■□□ 2.35
NKX2-4-201ENST00000351817 GPRASP1Q5JY77 1395 aa29.73■■■□□ 2.35
NKX2-4-201ENST00000351817 FANCIQ9NVI1 1328 aa29.73■■■□□ 2.35
NKX2-4-201ENST00000351817 LRPPRCP42704 1394 aaKnown RBP29.73■■■□□ 2.35
NKX2-4-201ENST00000351817 B4GALNT3Q6L9W6 998 aa29.72■■■□□ 2.35
NKX2-4-201ENST00000351817 RNF123Q5XPI4 1314 aa29.72■■■□□ 2.35
NKX2-4-201ENST00000351817 A2MP01023 1474 aa29.72■■■□□ 2.35
NKX2-4-201ENST00000351817 ERBINQ96RT1 1412 aa29.71■■■□□ 2.35
NKX2-4-201ENST00000351817 ASXL2Q76L83 1435 aa29.71■■■□□ 2.35
NKX2-4-201ENST00000351817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.71■■■□□ 2.35
NKX2-4-201ENST00000351817 MAGI2Q86UL8 1455 aa29.69■■■□□ 2.34
NKX2-4-201ENST00000351817 RGL3Q3MIN7 710 aa29.68■■■□□ 2.34
NKX2-4-201ENST00000351817 ATP10AO60312 1499 aa29.68■■■□□ 2.34
NKX2-4-201ENST00000351817 EIF2AK4Q9P2K8 1649 aaKnown RBP29.68■■■□□ 2.34
NKX2-4-201ENST00000351817 PRDM15P57071 1507 aaPredicted RBP29.66■■■□□ 2.34
NKX2-4-201ENST00000351817 FANCAO15360 1455 aa29.66■■■□□ 2.34
NKX2-4-201ENST00000351817 AFAP1Q8N556 730 aa29.65■■■□□ 2.34
NKX2-4-201ENST00000351817 ZFYVE16Q7Z3T8 1539 aa29.65■■■□□ 2.34
NKX2-4-201ENST00000351817 NBPF1Q3BBV0 1214 aa29.64■■■□□ 2.34
NKX2-4-201ENST00000351817 RTEL1-TNFRSF6BF6WH68 1400 aa29.64■■■□□ 2.34
NKX2-4-201ENST00000351817 SPAG9O60271 1321 aaKnown RBP29.63■■■□□ 2.33
NKX2-4-201ENST00000351817 COL17A1Q9UMD9 1497 aaPredicted RBP29.62■■■□□ 2.33
NKX2-4-201ENST00000351817 PARD3Q8TEW0 1356 aa29.62■■■□□ 2.33
NKX2-4-201ENST00000351817 NLRP13Q86W25 1043 aa29.59■■■□□ 2.33
NKX2-4-201ENST00000351817 MSH5O43196 834 aa29.59■■■□□ 2.33
NKX2-4-201ENST00000351817 INO80Q9ULG1 1556 aaPredicted RBP29.56■■■□□ 2.32
NKX2-4-201ENST00000351817 WASHC2CQ9Y4E1 1318 aa29.56■■■□□ 2.32
NKX2-4-201ENST00000351817 PER1O15534 1290 aaPredicted RBP29.55■■■□□ 2.32
NKX2-4-201ENST00000351817 ADGRL1O94910 1474 aa29.54■■■□□ 2.32
NKX2-4-201ENST00000351817 TESK2Q96S53 571 aa29.54■■■□□ 2.32
NKX2-4-201ENST00000351817 ATP7AQ04656 1500 aa29.53■■■□□ 2.32
NKX2-4-201ENST00000351817 RNF17Q9BXT8 1623 aaKnown RBP29.52■■■□□ 2.32
NKX2-4-201ENST00000351817 SCAPERQ9BY12 1400 aa29.52■■■□□ 2.32
NKX2-4-201ENST00000351817 DISP3Q9P2K9 1392 aa29.52■■■□□ 2.32
NKX2-4-201ENST00000351817 NPM1P06748 294 aaKnown RBP eCLIP29.51■■■□□ 2.31
NKX2-4-201ENST00000351817 SENP3-EIF4A1A0A087X0R7 540 aa29.49■■■□□ 2.31
NKX2-4-201ENST00000351817 CCDC136Q96JN2 1154 aa29.48■■■□□ 2.31
NKX2-4-201ENST00000351817 DEPDC5O75140 1603 aa29.48■■■□□ 2.31
NKX2-4-201ENST00000351817 TMF1P82094 1093 aa29.47■■■□□ 2.31
NKX2-4-201ENST00000351817 PDE3BQ13370 1112 aa29.44■■■□□ 2.3
NKX2-4-201ENST00000351817 INSRP06213 1382 aa29.44■■■□□ 2.3
NKX2-4-201ENST00000351817 ZMYM4Q5VZL5 1548 aa29.43■■■□□ 2.3
NKX2-4-201ENST00000351817 PANK3Q9H999 370 aa29.41■■■□□ 2.3
NKX2-4-201ENST00000351817 MADDQ8WXG6 1647 aa29.4■■■□□ 2.3
NKX2-4-201ENST00000351817 TRPM2O94759 1503 aa29.4■■■□□ 2.3
NKX2-4-201ENST00000351817 CEP152O94986 1710 aa29.38■■■□□ 2.29
NKX2-4-201ENST00000351817 CC2D1BQ5T0F9 858 aaKnown RBP29.38■■■□□ 2.29
NKX2-4-201ENST00000351817 ERICH6Q7L0X2 663 aa29.38■■■□□ 2.29
NKX2-4-201ENST00000351817 CD109Q6YHK3 1445 aa29.38■■■□□ 2.29
NKX2-4-201ENST00000351817 KIDINS220Q9ULH0 1771 aa29.38■■■□□ 2.29
NKX2-4-201ENST00000351817 RRP1P56182 461 aaKnown RBP29.37■■■□□ 2.29
NKX2-4-201ENST00000351817 IQGAP1P46940 1657 aa29.37■■■□□ 2.29
NKX2-4-201ENST00000351817 SPHKAPQ2M3C7 1700 aa29.37■■■□□ 2.29
NKX2-4-201ENST00000351817 VWDEQ8N2E2 1590 aa29.37■■■□□ 2.29
NKX2-4-201ENST00000351817 STAC3Q96MF2 364 aa29.36■■■□□ 2.29
NKX2-4-201ENST00000351817 RCAN3Q9UKA8 241 aa29.35■■■□□ 2.29
NKX2-4-201ENST00000351817 BLMP54132 1417 aaPredicted RBP29.35■■■□□ 2.29
NKX2-4-201ENST00000351817 PTPRTO14522 1441 aa29.34■■■□□ 2.29
NKX2-4-201ENST00000351817 ZNF518AQ6AHZ1 1483 aa29.34■■■□□ 2.29
NKX2-4-201ENST00000351817 TET3O43151 1660 aa29.34■■■□□ 2.29
NKX2-4-201ENST00000351817 MYT1LQ9UL68 1186 aa29.33■■■□□ 2.29
NKX2-4-201ENST00000351817 CFAP74Q9C0B2 1584 aa29.33■■■□□ 2.29
NKX2-4-201ENST00000351817 MROH1Q8NDA8 1641 aa29.33■■■□□ 2.29
NKX2-4-201ENST00000351817 KIF3BO15066 747 aa29.31■■■□□ 2.28
NKX2-4-201ENST00000351817 SALL2Q9Y467 1007 aaPredicted RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms