RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 POGKQ9P215 609 aa19.92■□□□□ 0.78
PTBP1-201ENST00000349038 KDM2AQ9Y2K7 1162 aa19.9■□□□□ 0.78
PTBP1-201ENST00000349038 SYNJ2O15056 1496 aa19.89■□□□□ 0.78
PTBP1-201ENST00000349038 ZNF644Q9H582 1327 aaPredicted RBP19.89■□□□□ 0.78
PTBP1-201ENST00000349038 USP47Q96K76 1375 aa19.89■□□□□ 0.77
PTBP1-201ENST00000349038 KIF14Q15058 1648 aa19.88■□□□□ 0.77
PTBP1-201ENST00000349038 KDM5CP41229 1560 aa19.88■□□□□ 0.77
PTBP1-201ENST00000349038 OSCARQ8IYS5 282 aa19.87■□□□□ 0.77
PTBP1-201ENST00000349038 ARID3AQ99856 593 aa19.87■□□□□ 0.77
PTBP1-201ENST00000349038 KIAA1107Q9UPP5 1409 aa19.86■□□□□ 0.77
PTBP1-201ENST00000349038 PNISRQ8TF01 805 aaKnown RBP19.85■□□□□ 0.77
PTBP1-201ENST00000349038 RRAGDQ9NQL2 400 aaPredicted RBP19.85■□□□□ 0.77
PTBP1-201ENST00000349038 NUP153P49790 1475 aaKnown RBP19.85■□□□□ 0.77
PTBP1-201ENST00000349038 C20orf194Q5TEA3 1177 aa19.85■□□□□ 0.77
PTBP1-201ENST00000349038 HSP90AA2PQ14568 343 aaPredicted RBP19.83■□□□□ 0.76
PTBP1-201ENST00000349038 ADGBQ8N7X0 1667 aa19.82■□□□□ 0.76
PTBP1-201ENST00000349038 ROCK2O75116 1388 aaKnown RBP19.82■□□□□ 0.76
PTBP1-201ENST00000349038 KIAA0556O60303 1618 aa19.82■□□□□ 0.76
PTBP1-201ENST00000349038 ADGRL2O95490 1459 aa19.81■□□□□ 0.76
PTBP1-201ENST00000349038 DISP1Q96F81 1524 aa19.81■□□□□ 0.76
PTBP1-201ENST00000349038 UHRF1BP1Q6BDS2 1440 aa19.81■□□□□ 0.76
PTBP1-201ENST00000349038 CAMSAP2Q08AD1 1489 aa19.81■□□□□ 0.76
PTBP1-201ENST00000349038 LRPPRCP42704 1394 aaKnown RBP19.8■□□□□ 0.76
PTBP1-201ENST00000349038 PLEKHG5O94827 1062 aa19.8■□□□□ 0.76
PTBP1-201ENST00000349038 RALGAPBQ86X10 1494 aa19.8■□□□□ 0.76
PTBP1-201ENST00000349038 CLASP1Q7Z460 1538 aa19.8■□□□□ 0.76
PTBP1-201ENST00000349038 FAM43AQ8N2R8 423 aa19.79■□□□□ 0.76
PTBP1-201ENST00000349038 RAPGEF6Q8TEU7 1601 aa19.79■□□□□ 0.76
PTBP1-201ENST00000349038 CC2D1BQ5T0F9 858 aaKnown RBP19.79■□□□□ 0.76
PTBP1-201ENST00000349038 PNNQ9H307 717 aaKnown RBP19.79■□□□□ 0.76
PTBP1-201ENST00000349038 CROCC2H7BZ55 1655 aa19.76■□□□□ 0.75
PTBP1-201ENST00000349038 KIF15Q9NS87 1388 aa19.76■□□□□ 0.75
PTBP1-201ENST00000349038 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
PTBP1-201ENST00000349038 KIAA0586Q9BVV6 1533 aa19.75■□□□□ 0.75
PTBP1-201ENST00000349038 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
PTBP1-201ENST00000349038 HSP90AA1P07900 732 aaKnown RBP19.75■□□□□ 0.75
PTBP1-201ENST00000349038 TROQ12816 1431 aaPredicted RBP19.75■□□□□ 0.75
PTBP1-201ENST00000349038 PKD2Q13563 968 aa19.74■□□□□ 0.75
PTBP1-201ENST00000349038 BRD4O60885 1362 aaPredicted RBP19.74■□□□□ 0.75
PTBP1-201ENST00000349038 MS4A1P11836 297 aa19.74■□□□□ 0.75
PTBP1-201ENST00000349038 A0A0U1RQG5 324 aaPredicted RBP19.73■□□□□ 0.75
PTBP1-201ENST00000349038 KTN1Q86UP2 1357 aaKnown RBP19.73■□□□□ 0.75
PTBP1-201ENST00000349038 ARHGEF12Q9NZN5 1544 aa19.73■□□□□ 0.75
PTBP1-201ENST00000349038 GPATCH8Q9UKJ3 1502 aaKnown RBP19.73■□□□□ 0.75
PTBP1-201ENST00000349038 PRG4Q92954 1404 aaPredicted RBP19.73■□□□□ 0.75
PTBP1-201ENST00000349038 PANK2Q9BZ23 570 aa19.72■□□□□ 0.75
PTBP1-201ENST00000349038 CHMP7Q8WUX9 453 aaPredicted RBP19.71■□□□□ 0.75
PTBP1-201ENST00000349038 CFDP1Q9UEE9 299 aaPredicted RBP19.71■□□□□ 0.75
PTBP1-201ENST00000349038 E9PCH4 1651 aa19.7■□□□□ 0.74
PTBP1-201ENST00000349038 MYBBP1AQ9BQG0 1328 aaKnown RBP19.7■□□□□ 0.74
PTBP1-201ENST00000349038 ADCY10Q96PN6 1610 aa19.7■□□□□ 0.74
PTBP1-201ENST00000349038 NUP160Q12769 1436 aa19.7■□□□□ 0.74
PTBP1-201ENST00000349038 ANKRD30AQ9BXX3 1397 aa19.69■□□□□ 0.74
PTBP1-201ENST00000349038 RALBP1Q15311 655 aa19.68■□□□□ 0.74
PTBP1-201ENST00000349038 CARD11Q9BXL7 1154 aa19.68■□□□□ 0.74
PTBP1-201ENST00000349038 RIMBP3CA6NJZ7 1639 aa19.68■□□□□ 0.74
PTBP1-201ENST00000349038 RIMBP3BA6NNM3 1639 aa19.68■□□□□ 0.74
PTBP1-201ENST00000349038 RIMBP3Q9UFD9 1639 aa19.68■□□□□ 0.74
PTBP1-201ENST00000349038 ANKRD50Q9ULJ7 1429 aa19.68■□□□□ 0.74
PTBP1-201ENST00000349038 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
PTBP1-201ENST00000349038 FAM161AQ3B820 660 aa19.67■□□□□ 0.74
PTBP1-201ENST00000349038 KDM5DQ9BY66 1539 aa19.65■□□□□ 0.74
PTBP1-201ENST00000349038 FBLN2P98095 1184 aa19.65■□□□□ 0.74
PTBP1-201ENST00000349038 PODXL2Q9NZ53 605 aa19.65■□□□□ 0.74
PTBP1-201ENST00000349038 ZNF777Q9ULD5 760 aaPredicted RBP19.65■□□□□ 0.74
PTBP1-201ENST00000349038 SHROOM2Q13796 1616 aa19.63■□□□□ 0.73
PTBP1-201ENST00000349038 ST20-MTHFSA0A0A6YYL1 179 aa19.63■□□□□ 0.73
PTBP1-201ENST00000349038 ZBTB7CA1YPR0 619 aa19.63■□□□□ 0.73
PTBP1-201ENST00000349038 SHANK2Q9UPX8 1470 aa19.62■□□□□ 0.73
PTBP1-201ENST00000349038 NUP155O75694 1391 aa19.6■□□□□ 0.73
PTBP1-201ENST00000349038 PDE3BQ13370 1112 aa19.6■□□□□ 0.73
PTBP1-201ENST00000349038 PARD3Q8TEW0 1356 aa19.6■□□□□ 0.73
PTBP1-201ENST00000349038 C8orf34Q49A92 452 aa19.59■□□□□ 0.73
PTBP1-201ENST00000349038 SEC24BO95487 1268 aa19.58■□□□□ 0.73
PTBP1-201ENST00000349038 PLB1Q6P1J6 1458 aa19.58■□□□□ 0.73
PTBP1-201ENST00000349038 PTPRGP23470 1445 aa19.58■□□□□ 0.73
PTBP1-201ENST00000349038 CDC42BPAQ5VT25 1732 aa19.58■□□□□ 0.73
PTBP1-201ENST00000349038 GOLGA6L3A6NEY3 463 aa19.58■□□□□ 0.72
PTBP1-201ENST00000349038 CANXP27824 592 aaKnown RBP19.58■□□□□ 0.72
PTBP1-201ENST00000349038 NLRP13Q86W25 1043 aa19.57■□□□□ 0.72
PTBP1-201ENST00000349038 C9orf84Q5VXU9 1444 aa19.57■□□□□ 0.72
PTBP1-201ENST00000349038 RGL3Q3MIN7 710 aa19.56■□□□□ 0.72
PTBP1-201ENST00000349038 XRCC6P12956 609 aaKnown RBP eCLIP19.55■□□□□ 0.725e-10■□□□□ 9.2
PTBP1-201ENST00000349038 RBM10P98175 930 aaKnown RBP19.54■□□□□ 0.72
PTBP1-201ENST00000349038 L1TD1Q5T7N2 865 aaKnown RBP19.54■□□□□ 0.72
PTBP1-201ENST00000349038 INSRP06213 1382 aa19.54■□□□□ 0.72
PTBP1-201ENST00000349038 ABCC10Q5T3U5 1492 aa19.53■□□□□ 0.72
PTBP1-201ENST00000349038 ZMYM4Q5VZL5 1548 aa19.52■□□□□ 0.72
PTBP1-201ENST00000349038 CCDC146Q8IYE0 955 aa19.52■□□□□ 0.72
PTBP1-201ENST00000349038 TRIM44Q96DX7 344 aaPredicted RBP19.52■□□□□ 0.72
PTBP1-201ENST00000349038 BECN1Q14457 450 aa19.52■□□□□ 0.71
PTBP1-201ENST00000349038 TRPM1Q7Z4N2 1603 aa19.51■□□□□ 0.71
PTBP1-201ENST00000349038 PER1O15534 1290 aaPredicted RBP19.51■□□□□ 0.71
PTBP1-201ENST00000349038 BLMP54132 1417 aaPredicted RBP19.5■□□□□ 0.71
PTBP1-201ENST00000349038 CENPQQ7L2Z9 268 aaPredicted RBP19.5■□□□□ 0.71
PTBP1-201ENST00000349038 PRAG1Q86YV5 1406 aa19.5■□□□□ 0.71
PTBP1-201ENST00000349038 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
PTBP1-201ENST00000349038 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
PTBP1-201ENST00000349038 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
PTBP1-201ENST00000349038 COL17A1Q9UMD9 1497 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms