RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 CARD11Q9BXL7 1154 aa19.88■□□□□ 0.77
ARHGEF1-202ENST00000347545 MYO5CQ9NQX4 1742 aa19.87■□□□□ 0.77
ARHGEF1-202ENST00000347545 PPP4R2Q9NY27 417 aa19.87■□□□□ 0.77
ARHGEF1-202ENST00000347545 KDM2AQ9Y2K7 1162 aa19.86■□□□□ 0.77
ARHGEF1-202ENST00000347545 SMG6Q86US8 1419 aaKnown RBP19.86■□□□□ 0.77
ARHGEF1-202ENST00000347545 PLA2R1Q13018 1463 aa19.86■□□□□ 0.77
ARHGEF1-202ENST00000347545 ROCK2O75116 1388 aaKnown RBP19.85■□□□□ 0.77
ARHGEF1-202ENST00000347545 ST20-MTHFSA0A0A6YYL1 179 aa19.85■□□□□ 0.77
ARHGEF1-202ENST00000347545 DCAF11Q8TEB1 546 aa19.85■□□□□ 0.77
ARHGEF1-202ENST00000347545 PLXNC1O60486 1568 aa19.85■□□□□ 0.77
ARHGEF1-202ENST00000347545 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
ARHGEF1-202ENST00000347545 IQGAP3Q86VI3 1631 aa19.84■□□□□ 0.77
ARHGEF1-202ENST00000347545 PRAG1Q86YV5 1406 aa19.83■□□□□ 0.76
ARHGEF1-202ENST00000347545 PNISRQ8TF01 805 aaKnown RBP19.81■□□□□ 0.76
ARHGEF1-202ENST00000347545 ABCC2Q92887 1545 aa19.8■□□□□ 0.76
ARHGEF1-202ENST00000347545 MSH5O43196 834 aa19.8■□□□□ 0.76
ARHGEF1-202ENST00000347545 A2MP01023 1474 aa19.8■□□□□ 0.76
ARHGEF1-202ENST00000347545 LAMC1P11047 1609 aa19.78■□□□□ 0.76
ARHGEF1-202ENST00000347545 B4GALNT3Q6L9W6 998 aa19.78■□□□□ 0.76
ARHGEF1-202ENST00000347545 CCDC144AA2RUR9 1427 aa19.78■□□□□ 0.76
ARHGEF1-202ENST00000347545 RSPH4AQ5TD94 716 aa19.77■□□□□ 0.76
ARHGEF1-202ENST00000347545 PLEKHH2Q8IVE3 1493 aa19.77■□□□□ 0.76
ARHGEF1-202ENST00000347545 LRPPRCP42704 1394 aaKnown RBP19.77■□□□□ 0.76
ARHGEF1-202ENST00000347545 MAGI2Q86UL8 1455 aa19.76■□□□□ 0.75
ARHGEF1-202ENST00000347545 RNF123Q5XPI4 1314 aa19.76■□□□□ 0.75
ARHGEF1-202ENST00000347545 SENP3-EIF4A1A0A087X0R7 540 aa19.76■□□□□ 0.75
ARHGEF1-202ENST00000347545 NUDCQ9Y266 331 aa19.75■□□□□ 0.75
ARHGEF1-202ENST00000347545 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
ARHGEF1-202ENST00000347545 ZCCHC11Q5TAX3 1644 aaKnown RBP19.74■□□□□ 0.75
ARHGEF1-202ENST00000347545 GPRASP1Q5JY77 1395 aa19.74■□□□□ 0.75
ARHGEF1-202ENST00000347545 NBPF1Q3BBV0 1214 aa19.73■□□□□ 0.75
ARHGEF1-202ENST00000347545 DUOX2Q9NRD8 1548 aa19.73■□□□□ 0.75
ARHGEF1-202ENST00000347545 FANCIQ9NVI1 1328 aa19.72■□□□□ 0.75
ARHGEF1-202ENST00000347545 BRD4O60885 1362 aaPredicted RBP19.72■□□□□ 0.75
ARHGEF1-202ENST00000347545 MYBBP1AQ9BQG0 1328 aaKnown RBP19.71■□□□□ 0.75
ARHGEF1-202ENST00000347545 TMC1Q8TDI8 760 aa19.71■□□□□ 0.75
ARHGEF1-202ENST00000347545 RNF17Q9BXT8 1623 aaKnown RBP19.71■□□□□ 0.75
ARHGEF1-202ENST00000347545 COL17A1Q9UMD9 1497 aaPredicted RBP19.7■□□□□ 0.74
ARHGEF1-202ENST00000347545 KTN1Q86UP2 1357 aaKnown RBP19.7■□□□□ 0.74
ARHGEF1-202ENST00000347545 RGL3Q3MIN7 710 aa19.7■□□□□ 0.74
ARHGEF1-202ENST00000347545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■□□□ 14.4
ARHGEF1-202ENST00000347545 ATP10AO60312 1499 aa19.69■□□□□ 0.74
ARHGEF1-202ENST00000347545 EIF2AK4Q9P2K8 1649 aaKnown RBP19.69■□□□□ 0.74
ARHGEF1-202ENST00000347545 ABCC1P33527 1531 aa19.68■□□□□ 0.74
ARHGEF1-202ENST00000347545 PARD3Q8TEW0 1356 aa19.68■□□□□ 0.74
ARHGEF1-202ENST00000347545 RALBP1Q15311 655 aa19.67■□□□□ 0.74
ARHGEF1-202ENST00000347545 ERBINQ96RT1 1412 aa19.67■□□□□ 0.74
ARHGEF1-202ENST00000347545 DISP3Q9P2K9 1392 aa19.67■□□□□ 0.74
ARHGEF1-202ENST00000347545 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
ARHGEF1-202ENST00000347545 PLCH2O75038 1416 aa19.66■□□□□ 0.74
ARHGEF1-202ENST00000347545 PER1O15534 1290 aaPredicted RBP19.65■□□□□ 0.74
ARHGEF1-202ENST00000347545 TESK2Q96S53 571 aa19.65■□□□□ 0.74
ARHGEF1-202ENST00000347545 TRAPPC8Q9Y2L5 1435 aa19.63■□□□□ 0.73
ARHGEF1-202ENST00000347545 MADDQ8WXG6 1647 aa19.61■□□□□ 0.73
ARHGEF1-202ENST00000347545 IQGAP1P46940 1657 aa19.61■□□□□ 0.73
ARHGEF1-202ENST00000347545 UHRF1BP1LA0JNW5 1464 aa19.61■□□□□ 0.73
ARHGEF1-202ENST00000347545 CEP152O94986 1710 aa19.6■□□□□ 0.73
ARHGEF1-202ENST00000347545 SPHKAPQ2M3C7 1700 aa19.59■□□□□ 0.73
ARHGEF1-202ENST00000347545 ZFYVE16Q7Z3T8 1539 aa19.58■□□□□ 0.72
ARHGEF1-202ENST00000347545 DEPDC5O75140 1603 aa19.58■□□□□ 0.72
ARHGEF1-202ENST00000347545 NLRP13Q86W25 1043 aa19.57■□□□□ 0.72
ARHGEF1-202ENST00000347545 CLTCL1P53675 1640 aa19.55■□□□□ 0.72
ARHGEF1-202ENST00000347545 TRPM2O94759 1503 aa19.55■□□□□ 0.72
ARHGEF1-202ENST00000347545 EFCAB2Q5VUJ9 269 aa19.53■□□□□ 0.72
ARHGEF1-202ENST00000347545 BLMP54132 1417 aaPredicted RBP19.53■□□□□ 0.72
ARHGEF1-202ENST00000347545 PANK3Q9H999 370 aa19.52■□□□□ 0.72
ARHGEF1-202ENST00000347545 ARAP3Q8WWN8 1544 aa19.52■□□□□ 0.71
ARHGEF1-202ENST00000347545 CC2D1BQ5T0F9 858 aaKnown RBP19.51■□□□□ 0.71
ARHGEF1-202ENST00000347545 CCDC136Q96JN2 1154 aa19.51■□□□□ 0.71
ARHGEF1-202ENST00000347545 WDR7Q9Y4E6 1490 aa19.51■□□□□ 0.71
ARHGEF1-202ENST00000347545 TET3O43151 1660 aa19.5■□□□□ 0.71
ARHGEF1-202ENST00000347545 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
ARHGEF1-202ENST00000347545 INO80Q9ULG1 1556 aaPredicted RBP19.5■□□□□ 0.71
ARHGEF1-202ENST00000347545 MYOM1P52179 1685 aa19.5■□□□□ 0.71
ARHGEF1-202ENST00000347545 ZMYM4Q5VZL5 1548 aa19.49■□□□□ 0.71
ARHGEF1-202ENST00000347545 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
ARHGEF1-202ENST00000347545 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
ARHGEF1-202ENST00000347545 ABCA9Q8IUA7 1624 aa19.49■□□□□ 0.71
ARHGEF1-202ENST00000347545 RTEL1-TNFRSF6BF6WH68 1400 aa19.49■□□□□ 0.71
ARHGEF1-202ENST00000347545 PTPRTO14522 1441 aa19.49■□□□□ 0.71
ARHGEF1-202ENST00000347545 VWDEQ8N2E2 1590 aa19.48■□□□□ 0.71
ARHGEF1-202ENST00000347545 AFAP1Q8N556 730 aa19.47■□□□□ 0.71
ARHGEF1-202ENST00000347545 TMF1P82094 1093 aa19.47■□□□□ 0.71
ARHGEF1-202ENST00000347545 INSRP06213 1382 aa19.46■□□□□ 0.71
ARHGEF1-202ENST00000347545 CDCA7LQ96GN5 454 aa19.46■□□□□ 0.71
ARHGEF1-202ENST00000347545 SPAG9O60271 1321 aaKnown RBP19.46■□□□□ 0.71
ARHGEF1-202ENST00000347545 MROH1Q8NDA8 1641 aa19.45■□□□□ 0.7
ARHGEF1-202ENST00000347545 RCAN3Q9UKA8 241 aa19.45■□□□□ 0.7
ARHGEF1-202ENST00000347545 ATP7AQ04656 1500 aa19.45■□□□□ 0.7
ARHGEF1-202ENST00000347545 SYNMO15061 1565 aa19.44■□□□□ 0.7
ARHGEF1-202ENST00000347545 EXOC6Q8TAG9 804 aa19.44■□□□□ 0.7
ARHGEF1-202ENST00000347545 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
ARHGEF1-202ENST00000347545 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
ARHGEF1-202ENST00000347545 SCAPERQ9BY12 1400 aa19.42■□□□□ 0.7
ARHGEF1-202ENST00000347545 SCAF11Q99590 1463 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-202ENST00000347545 IFT172Q9UG01 1749 aa19.4■□□□□ 0.7
ARHGEF1-202ENST00000347545 UGGT1Q9NYU2 1555 aa19.39■□□□□ 0.7
ARHGEF1-202ENST00000347545 FANCAO15360 1455 aa19.39■□□□□ 0.69
ARHGEF1-202ENST00000347545 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.69
ARHGEF1-202ENST00000347545 ABCA6Q8N139 1617 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms