RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 PKD2Q13563 968 aa18.73■□□□□ 0.59
CUL3-202ENST00000344951 HDGFP51858 240 aaKnown RBP18.72■□□□□ 0.59
CUL3-202ENST00000344951 RALBP1Q15311 655 aa18.72■□□□□ 0.59
CUL3-202ENST00000344951 CTDP1Q9Y5B0 961 aaPredicted RBP18.72■□□□□ 0.59
CUL3-202ENST00000344951 STK31Q9BXU1 1019 aa18.71■□□□□ 0.59
CUL3-202ENST00000344951 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
CUL3-202ENST00000344951 CWC22Q9HCG8 908 aaKnown RBP18.7■□□□□ 0.58
CUL3-202ENST00000344951 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
CUL3-202ENST00000344951 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
CUL3-202ENST00000344951 PCMTD1Q96MG8 357 aaPredicted RBP18.69■□□□□ 0.58
CUL3-202ENST00000344951 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
CUL3-202ENST00000344951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.68■□□□□ 0.589e-7■■■□□ 14.6
CUL3-202ENST00000344951 CFAP44Q96MT7 982 aa18.68■□□□□ 0.58
CUL3-202ENST00000344951 SLC4A3P48751 1232 aa18.68■□□□□ 0.58
CUL3-202ENST00000344951 SYAP1Q96A49 352 aaPredicted RBP18.68■□□□□ 0.58
CUL3-202ENST00000344951 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
CUL3-202ENST00000344951 TRIM34Q9BYJ4 488 aa18.68■□□□□ 0.58
CUL3-202ENST00000344951 KANK1Q14678 1352 aa18.67■□□□□ 0.58
CUL3-202ENST00000344951 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
CUL3-202ENST00000344951 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
CUL3-202ENST00000344951 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
CUL3-202ENST00000344951 H3BQV1 296 aa18.66■□□□□ 0.58
CUL3-202ENST00000344951 IFFO2Q5TF58 517 aa18.66■□□□□ 0.58
CUL3-202ENST00000344951 RILPL2Q969X0 211 aa18.66■□□□□ 0.58
CUL3-202ENST00000344951 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
CUL3-202ENST00000344951 FOSBP53539 338 aa18.65■□□□□ 0.58
CUL3-202ENST00000344951 ZNF592Q92610 1267 aa18.65■□□□□ 0.58
CUL3-202ENST00000344951 CUX2O14529 1486 aa18.65■□□□□ 0.58
CUL3-202ENST00000344951 CCDC34Q96HJ3 373 aa18.65■□□□□ 0.58
CUL3-202ENST00000344951 SPAG9O60271 1321 aaKnown RBP18.65■□□□□ 0.58
CUL3-202ENST00000344951 DHX16O60231 1041 aaKnown RBP18.64■□□□□ 0.58
CUL3-202ENST00000344951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.64■□□□□ 0.589e-7■■■■■ 98.1
CUL3-202ENST00000344951 MCTP1Q6DN14 999 aa18.64■□□□□ 0.57
CUL3-202ENST00000344951 CALD1Q05682 793 aaKnown RBP18.63■□□□□ 0.57
CUL3-202ENST00000344951 NGDNQ8NEJ9 315 aaKnown RBP18.63■□□□□ 0.57
CUL3-202ENST00000344951 KDM4AO75164 1064 aa18.62■□□□□ 0.57
CUL3-202ENST00000344951 SYTL4Q96C24 671 aaPredicted RBP18.62■□□□□ 0.57
CUL3-202ENST00000344951 AMPHP49418 695 aa18.62■□□□□ 0.57
CUL3-202ENST00000344951 KIF16BQ96L93 1317 aa18.62■□□□□ 0.57
CUL3-202ENST00000344951 SETQ01105 290 aaPredicted RBP18.61■□□□□ 0.57
CUL3-202ENST00000344951 TSR1Q2NL82 804 aaKnown RBP18.61■□□□□ 0.57
CUL3-202ENST00000344951 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
CUL3-202ENST00000344951 EVA1CP58658 441 aa18.61■□□□□ 0.57
CUL3-202ENST00000344951 NECTIN2Q92692 538 aa18.61■□□□□ 0.57
CUL3-202ENST00000344951 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
CUL3-202ENST00000344951 PDE4AP27815 886 aa18.6■□□□□ 0.57
CUL3-202ENST00000344951 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
CUL3-202ENST00000344951 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
CUL3-202ENST00000344951 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
CUL3-202ENST00000344951 HSP90AA2PQ14568 343 aaPredicted RBP18.59■□□□□ 0.57
CUL3-202ENST00000344951 GSE1Q14687 1217 aa18.59■□□□□ 0.57
CUL3-202ENST00000344951 L3MBTL2Q969R5 705 aa18.59■□□□□ 0.57
CUL3-202ENST00000344951 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
CUL3-202ENST00000344951 FAM184AQ8NB25 1140 aa18.58■□□□□ 0.57
CUL3-202ENST00000344951 MTMR7Q9Y216 660 aa18.58■□□□□ 0.56
CUL3-202ENST00000344951 PLIN1O60240 522 aa18.58■□□□□ 0.56
CUL3-202ENST00000344951 ERCC6Q03468 1493 aa18.57■□□□□ 0.56
CUL3-202ENST00000344951 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
CUL3-202ENST00000344951 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
CUL3-202ENST00000344951 EXOC6Q8TAG9 804 aa18.56■□□□□ 0.56
CUL3-202ENST00000344951 CENPJQ9HC77 1338 aaPredicted RBP18.55■□□□□ 0.56
CUL3-202ENST00000344951 APPP05067 770 aa18.55■□□□□ 0.56
CUL3-202ENST00000344951 TPM2P07951 284 aa18.55■□□□□ 0.56
CUL3-202ENST00000344951 FYB1O15117 783 aa18.55■□□□□ 0.56
CUL3-202ENST00000344951 CSPP1Q1MSJ5 1256 aa18.55■□□□□ 0.56
CUL3-202ENST00000344951 SKIDA1Q1XH10 827 aa18.53■□□□□ 0.56
CUL3-202ENST00000344951 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
CUL3-202ENST00000344951 NUP155O75694 1391 aa18.53■□□□□ 0.56
CUL3-202ENST00000344951 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
CUL3-202ENST00000344951 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
CUL3-202ENST00000344951 DHX57Q6P158 1386 aaKnown RBP18.52■□□□□ 0.55
CUL3-202ENST00000344951 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.55
CUL3-202ENST00000344951 FAM161AQ3B820 660 aa18.52■□□□□ 0.55
CUL3-202ENST00000344951 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.55
CUL3-202ENST00000344951 NOL10Q9BSC4 688 aaKnown RBP18.52■□□□□ 0.55
CUL3-202ENST00000344951 NAP1L1P55209 391 aaKnown RBP18.51■□□□□ 0.55
CUL3-202ENST00000344951 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
CUL3-202ENST00000344951 GOLGA6L19H0YKK7 550 aa18.51■□□□□ 0.55
CUL3-202ENST00000344951 HMMRO75330 724 aa18.51■□□□□ 0.55
CUL3-202ENST00000344951 NACADO15069 1562 aa18.51■□□□□ 0.55
CUL3-202ENST00000344951 DDX11L8A8MPP1 907 aa18.5■□□□□ 0.55
CUL3-202ENST00000344951 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
CUL3-202ENST00000344951 CRBNQ96SW2 442 aa18.5■□□□□ 0.55
CUL3-202ENST00000344951 VPS37DQ86XT2 251 aa18.5■□□□□ 0.55
CUL3-202ENST00000344951 RRP1P56182 461 aaKnown RBP18.49■□□□□ 0.55
CUL3-202ENST00000344951 ZFYVE27Q5T4F4 411 aa18.49■□□□□ 0.55
CUL3-202ENST00000344951 CCDC43Q96MW1 224 aaKnown RBP18.49■□□□□ 0.55
CUL3-202ENST00000344951 RRP12Q5JTH9 1297 aaKnown RBP18.49■□□□□ 0.55
CUL3-202ENST00000344951 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
CUL3-202ENST00000344951 BECN2A8MW95 431 aa18.49■□□□□ 0.55
CUL3-202ENST00000344951 CALRP27797 417 aaKnown RBP18.48■□□□□ 0.55
CUL3-202ENST00000344951 SYNE3Q6ZMZ3 975 aa18.48■□□□□ 0.55
CUL3-202ENST00000344951 ZNF771Q7L3S4 317 aaPredicted RBP18.48■□□□□ 0.55
CUL3-202ENST00000344951 MYBBP1AQ9BQG0 1328 aaKnown RBP18.47■□□□□ 0.55
CUL3-202ENST00000344951 KIF15Q9NS87 1388 aa18.47■□□□□ 0.55
CUL3-202ENST00000344951 AMOTL1Q8IY63 956 aa18.46■□□□□ 0.55
CUL3-202ENST00000344951 TPM1P09493 284 aa18.46■□□□□ 0.55
CUL3-202ENST00000344951 PAF1Q8N7H5 531 aa18.46■□□□□ 0.55
CUL3-202ENST00000344951 ST18O60284 1047 aa18.46■□□□□ 0.55
CUL3-202ENST00000344951 ANKRD45Q5TZF3 282 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms