RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
SNX21-202ENST00000344780 NOP58Q9Y2X3 529 aaKnown RBP17.81■□□□□ 0.44
SNX21-202ENST00000344780 ITSN2Q9NZM3 1697 aa17.81■□□□□ 0.44
SNX21-202ENST00000344780 BCORL1Q5H9F3 1711 aa17.81■□□□□ 0.44
SNX21-202ENST00000344780 ARHGAP5Q13017 1502 aa17.8■□□□□ 0.44
SNX21-202ENST00000344780 CDC42BPAQ5VT25 1732 aa17.79■□□□□ 0.44
SNX21-202ENST00000344780 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
SNX21-202ENST00000344780 CCDC144AA2RUR9 1427 aa17.79■□□□□ 0.44
SNX21-202ENST00000344780 ABCA8O94911 1581 aa17.78■□□□□ 0.44
SNX21-202ENST00000344780 SMG6Q86US8 1419 aaKnown RBP17.78■□□□□ 0.44
SNX21-202ENST00000344780 ERCC6L2Q5T890 1561 aa17.78■□□□□ 0.44
SNX21-202ENST00000344780 ADGRL2O95490 1459 aa17.77■□□□□ 0.44
SNX21-202ENST00000344780 MYBBP1AQ9BQG0 1328 aaKnown RBP17.77■□□□□ 0.44
SNX21-202ENST00000344780 EXOC6Q8TAG9 804 aa17.76■□□□□ 0.43
SNX21-202ENST00000344780 PLEKHH2Q8IVE3 1493 aa17.76■□□□□ 0.43
SNX21-202ENST00000344780 UBE2Q2Q8WVN8 375 aa17.76■□□□□ 0.43
SNX21-202ENST00000344780 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
SNX21-202ENST00000344780 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
SNX21-202ENST00000344780 ANP32AP39687 249 aaKnown RBP17.75■□□□□ 0.43
SNX21-202ENST00000344780 SYCP2Q9BX26 1530 aa17.74■□□□□ 0.43
SNX21-202ENST00000344780 PLIN1O60240 522 aa17.74■□□□□ 0.43
SNX21-202ENST00000344780 RALBP1Q15311 655 aa17.74■□□□□ 0.43
SNX21-202ENST00000344780 PANK3Q9H999 370 aa17.74■□□□□ 0.43
SNX21-202ENST00000344780 RCAN3Q9UKA8 241 aa17.73■□□□□ 0.43
SNX21-202ENST00000344780 ADGBQ8N7X0 1667 aa17.73■□□□□ 0.43
SNX21-202ENST00000344780 CCDC141Q6ZP82 1450 aa17.73■□□□□ 0.43
SNX21-202ENST00000344780 ARID4BQ4LE39 1312 aaPredicted RBP17.73■□□□□ 0.43
SNX21-202ENST00000344780 CHGAP10645 457 aaKnown RBP17.72■□□□□ 0.43
SNX21-202ENST00000344780 EFCAB2Q5VUJ9 269 aa17.72■□□□□ 0.43
SNX21-202ENST00000344780 NLRP13Q86W25 1043 aa17.71■□□□□ 0.43
SNX21-202ENST00000344780 KTN1Q86UP2 1357 aaKnown RBP17.71■□□□□ 0.42
SNX21-202ENST00000344780 KDM5CP41229 1560 aa17.69■□□□□ 0.42
SNX21-202ENST00000344780 RRP1P56182 461 aaKnown RBP17.69■□□□□ 0.42
SNX21-202ENST00000344780 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
SNX21-202ENST00000344780 RSPH4AQ5TD94 716 aa17.69■□□□□ 0.42
SNX21-202ENST00000344780 FAM135AQ9P2D6 1515 aa17.69■□□□□ 0.42
SNX21-202ENST00000344780 BRPF3Q9ULD4 1205 aa17.69■□□□□ 0.42
SNX21-202ENST00000344780 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
SNX21-202ENST00000344780 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
SNX21-202ENST00000344780 ADCY10Q96PN6 1610 aa17.67■□□□□ 0.42
SNX21-202ENST00000344780 KIF3BO15066 747 aa17.67■□□□□ 0.42
SNX21-202ENST00000344780 SKAP1Q86WV1 359 aa17.67■□□□□ 0.42
SNX21-202ENST00000344780 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
SNX21-202ENST00000344780 CROCC2H7BZ55 1655 aa17.67■□□□□ 0.42
SNX21-202ENST00000344780 BRD4O60885 1362 aaPredicted RBP17.67■□□□□ 0.42
SNX21-202ENST00000344780 DISP3Q9P2K9 1392 aa17.66■□□□□ 0.42
SNX21-202ENST00000344780 TTC37Q6PGP7 1564 aa17.65■□□□□ 0.42
SNX21-202ENST00000344780 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
SNX21-202ENST00000344780 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
SNX21-202ENST00000344780 CHD1O14646 1710 aa17.63■□□□□ 0.41
SNX21-202ENST00000344780 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
SNX21-202ENST00000344780 TRAPPC8Q9Y2L5 1435 aa17.63■□□□□ 0.41
SNX21-202ENST00000344780 PLA2R1Q13018 1463 aa17.63■□□□□ 0.41
SNX21-202ENST00000344780 TMF1P82094 1093 aa17.63■□□□□ 0.41
SNX21-202ENST00000344780 POLR1AO95602 1720 aaPredicted RBP17.63■□□□□ 0.41
SNX21-202ENST00000344780 PKNOX2Q96KN3 472 aa17.63■□□□□ 0.41
SNX21-202ENST00000344780 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNX21-202ENST00000344780 SHANK2Q9UPX8 1470 aa17.62■□□□□ 0.41
SNX21-202ENST00000344780 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
SNX21-202ENST00000344780 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
SNX21-202ENST00000344780 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
SNX21-202ENST00000344780 TESK2Q96S53 571 aa17.61■□□□□ 0.41
SNX21-202ENST00000344780 PRAG1Q86YV5 1406 aa17.61■□□□□ 0.41
SNX21-202ENST00000344780 IPO9Q96P70 1041 aaKnown RBP17.61■□□□□ 0.41
SNX21-202ENST00000344780 PER1O15534 1290 aaPredicted RBP17.6■□□□□ 0.41
SNX21-202ENST00000344780 KNSTRNQ9Y448 316 aa17.59■□□□□ 0.41
SNX21-202ENST00000344780 A2MP01023 1474 aa17.59■□□□□ 0.41
SNX21-202ENST00000344780 NEFMP07197 916 aa17.58■□□□□ 0.41
SNX21-202ENST00000344780 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.41
SNX21-202ENST00000344780 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNX21-202ENST00000344780 ADAMTS8Q9UP79 889 aa17.58■□□□□ 0.4
SNX21-202ENST00000344780 TNNT2P45379 298 aaPredicted RBP17.57■□□□□ 0.4
SNX21-202ENST00000344780 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
SNX21-202ENST00000344780 GGT6Q6P531 493 aa17.56■□□□□ 0.4
SNX21-202ENST00000344780 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
SNX21-202ENST00000344780 CFAP70Q5T0N1 1121 aa17.56■□□□□ 0.4
SNX21-202ENST00000344780 SCAPERQ9BY12 1400 aa17.54■□□□□ 0.4
SNX21-202ENST00000344780 PDE4AP27815 886 aa17.54■□□□□ 0.4
SNX21-202ENST00000344780 PREX2Q70Z35 1606 aa17.53■□□□□ 0.4
SNX21-202ENST00000344780 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
SNX21-202ENST00000344780 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
SNX21-202ENST00000344780 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
SNX21-202ENST00000344780 C20orf194Q5TEA3 1177 aa17.52■□□□□ 0.4
SNX21-202ENST00000344780 ERBINQ96RT1 1412 aa17.52■□□□□ 0.4
SNX21-202ENST00000344780 KDM5DQ9BY66 1539 aa17.51■□□□□ 0.39
SNX21-202ENST00000344780 PLCH2O75038 1416 aa17.51■□□□□ 0.39
SNX21-202ENST00000344780 ABCC2Q92887 1545 aa17.5■□□□□ 0.39
SNX21-202ENST00000344780 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
SNX21-202ENST00000344780 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNX21-202ENST00000344780 ARXQ96QS3 562 aa17.48■□□□□ 0.39
SNX21-202ENST00000344780 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
SNX21-202ENST00000344780 TRAK1Q9UPV9 953 aa17.47■□□□□ 0.39
SNX21-202ENST00000344780 TMEM132EQ6IEE7 984 aa17.47■□□□□ 0.39
SNX21-202ENST00000344780 ADGRF5Q8IZF2 1346 aa17.46■□□□□ 0.39
SNX21-202ENST00000344780 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
SNX21-202ENST00000344780 NPM1P06748 294 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNX21-202ENST00000344780 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
SNX21-202ENST00000344780 RGS3P49796 1198 aa17.44■□□□□ 0.38
SNX21-202ENST00000344780 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
SNX21-202ENST00000344780 BACH2Q9BYV9 841 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms