RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 GZF1Q9H116 711 aaPredicted RBP19.31■□□□□ 0.68
CLCN1-201ENST00000343257 KIAA1107Q9UPP5 1409 aa19.31■□□□□ 0.68
CLCN1-201ENST00000343257 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
CLCN1-201ENST00000343257 CUL7Q14999 1698 aa19.3■□□□□ 0.68
CLCN1-201ENST00000343257 PANK3Q9H999 370 aa19.3■□□□□ 0.68
CLCN1-201ENST00000343257 SEC24BO95487 1268 aa19.3■□□□□ 0.68
CLCN1-201ENST00000343257 ROCK1Q13464 1354 aa19.29■□□□□ 0.68
CLCN1-201ENST00000343257 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
CLCN1-201ENST00000343257 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
CLCN1-201ENST00000343257 MBD5Q9P267 1494 aa19.28■□□□□ 0.68
CLCN1-201ENST00000343257 NUP155O75694 1391 aa19.27■□□□□ 0.68
CLCN1-201ENST00000343257 PKNOX2Q96KN3 472 aa19.27■□□□□ 0.68
CLCN1-201ENST00000343257 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
CLCN1-201ENST00000343257 CCDC146Q8IYE0 955 aa19.26■□□□□ 0.67
CLCN1-201ENST00000343257 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
CLCN1-201ENST00000343257 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
CLCN1-201ENST00000343257 PARD3Q8TEW0 1356 aa19.26■□□□□ 0.67
CLCN1-201ENST00000343257 GAPVD1Q14C86 1478 aa19.24■□□□□ 0.67
CLCN1-201ENST00000343257 BCAR3O75815 825 aa19.24■□□□□ 0.67
CLCN1-201ENST00000343257 DUSP27Q5VZP5 1158 aa19.23■□□□□ 0.67
CLCN1-201ENST00000343257 WDR43Q15061 677 aaKnown RBP eCLIP19.23■□□□□ 0.67
CLCN1-201ENST00000343257 IGHDP01880 384 aa19.22■□□□□ 0.67
CLCN1-201ENST00000343257 PANK2Q9BZ23 570 aa19.21■□□□□ 0.67
CLCN1-201ENST00000343257 PLEKHH1Q9ULM0 1364 aa19.21■□□□□ 0.67
CLCN1-201ENST00000343257 KIF14Q15058 1648 aa19.21■□□□□ 0.67
CLCN1-201ENST00000343257 RALGAPBQ86X10 1494 aa19.2■□□□□ 0.66
CLCN1-201ENST00000343257 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.2■□□□□ 0.66
CLCN1-201ENST00000343257 GOLGA2Q08379 1002 aa19.19■□□□□ 0.66
CLCN1-201ENST00000343257 USP19O94966 1318 aa19.18■□□□□ 0.66
CLCN1-201ENST00000343257 SPINK5Q9NQ38 1064 aaPredicted RBP19.18■□□□□ 0.66
CLCN1-201ENST00000343257 BECN1Q14457 450 aa19.17■□□□□ 0.66
CLCN1-201ENST00000343257 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
CLCN1-201ENST00000343257 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
CLCN1-201ENST00000343257 DISP3Q9P2K9 1392 aa19.15■□□□□ 0.66
CLCN1-201ENST00000343257 DNMT1P26358 1616 aaKnown RBP19.15■□□□□ 0.66
CLCN1-201ENST00000343257 XRCC6P12956 609 aaKnown RBP eCLIP19.15■□□□□ 0.66
CLCN1-201ENST00000343257 CANXP27824 592 aaKnown RBP19.15■□□□□ 0.66
CLCN1-201ENST00000343257 PRG4Q92954 1404 aaPredicted RBP19.15■□□□□ 0.66
CLCN1-201ENST00000343257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.66
CLCN1-201ENST00000343257 COG6Q9Y2V7 657 aa19.14■□□□□ 0.65
CLCN1-201ENST00000343257 ANKRD50Q9ULJ7 1429 aa19.14■□□□□ 0.65
CLCN1-201ENST00000343257 ZMYND15Q9H091 742 aa19.14■□□□□ 0.65
CLCN1-201ENST00000343257 PANK1Q8TE04 598 aa19.13■□□□□ 0.65
CLCN1-201ENST00000343257 KIAA0586Q9BVV6 1533 aa19.13■□□□□ 0.65
CLCN1-201ENST00000343257 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
CLCN1-201ENST00000343257 GLIPR1L2Q4G1C9 344 aa19.12■□□□□ 0.65
CLCN1-201ENST00000343257 BLMP54132 1417 aaPredicted RBP19.12■□□□□ 0.65
CLCN1-201ENST00000343257 GOLGA6L3A6NEY3 463 aa19.12■□□□□ 0.65
CLCN1-201ENST00000343257 ANKRD30AQ9BXX3 1397 aa19.12■□□□□ 0.65
CLCN1-201ENST00000343257 APAF1O14727 1248 aa19.11■□□□□ 0.65
CLCN1-201ENST00000343257 HSP90AA2PQ14568 343 aaPredicted RBP19.11■□□□□ 0.65
CLCN1-201ENST00000343257 LAMC3Q9Y6N6 1575 aa19.11■□□□□ 0.65
CLCN1-201ENST00000343257 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
CLCN1-201ENST00000343257 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
CLCN1-201ENST00000343257 CAMSAP2Q08AD1 1489 aa19.1■□□□□ 0.65
CLCN1-201ENST00000343257 PPP2R1AP30153 589 aa19.09■□□□□ 0.65
CLCN1-201ENST00000343257 HSP90AA1P07900 732 aaKnown RBP19.09■□□□□ 0.65
CLCN1-201ENST00000343257 KNSTRNQ9Y448 316 aa19.09■□□□□ 0.65
CLCN1-201ENST00000343257 SLFN5Q08AF3 891 aa19.08■□□□□ 0.65
CLCN1-201ENST00000343257 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.65
CLCN1-201ENST00000343257 ZMYM4Q5VZL5 1548 aa19.08■□□□□ 0.64
CLCN1-201ENST00000343257 WDR62O43379 1518 aa19.07■□□□□ 0.64
CLCN1-201ENST00000343257 NEUROD2Q15784 382 aa19.07■□□□□ 0.64
CLCN1-201ENST00000343257 TBC1D2Q9BYX2 928 aa19.07■□□□□ 0.64
CLCN1-201ENST00000343257 TESK2Q96S53 571 aa19.07■□□□□ 0.64
CLCN1-201ENST00000343257 HNRNPMP52272 730 aaKnown RBP eCLIP19.06■□□□□ 0.64
CLCN1-201ENST00000343257 TMF1P82094 1093 aa19.06■□□□□ 0.64
CLCN1-201ENST00000343257 TSPY4P0CV99 314 aa19.05■□□□□ 0.64
CLCN1-201ENST00000343257 TSPY10P0CW01 314 aa19.05■□□□□ 0.64
CLCN1-201ENST00000343257 UPF2Q9HAU5 1272 aaKnown RBP19.04■□□□□ 0.64
CLCN1-201ENST00000343257 ANTXR1Q9H6X2 564 aa19.04■□□□□ 0.64
CLCN1-201ENST00000343257 BCL2L13Q9BXK5 485 aa19.03■□□□□ 0.64
CLCN1-201ENST00000343257 TNNQ9UQP3 1299 aa19.03■□□□□ 0.64
CLCN1-201ENST00000343257 CLUAP1Q96AJ1 413 aa19.02■□□□□ 0.64
CLCN1-201ENST00000343257 IQGAP2Q13576 1575 aa19.01■□□□□ 0.63
CLCN1-201ENST00000343257 MCM4P33991 863 aa19.01■□□□□ 0.63
CLCN1-201ENST00000343257 NUP153P49790 1475 aaKnown RBP19■□□□□ 0.63
CLCN1-201ENST00000343257 E9PCH4 1651 aa19■□□□□ 0.63
CLCN1-201ENST00000343257 ZNF521Q96K83 1311 aa19■□□□□ 0.63
CLCN1-201ENST00000343257 ZNF608Q9ULD9 1512 aaPredicted RBP18.99■□□□□ 0.63
CLCN1-201ENST00000343257 TRAK2O60296 914 aa18.99■□□□□ 0.63
CLCN1-201ENST00000343257 ERBINQ96RT1 1412 aa18.99■□□□□ 0.63
CLCN1-201ENST00000343257 RRP7AQ9Y3A4 280 aaKnown RBP18.98■□□□□ 0.63
CLCN1-201ENST00000343257 CLCN1P35523 988 aa18.98■□□□□ 0.63
CLCN1-201ENST00000343257 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
CLCN1-201ENST00000343257 GPATCH8Q9UKJ3 1502 aaKnown RBP18.97■□□□□ 0.63
CLCN1-201ENST00000343257 PRAG1Q86YV5 1406 aa18.97■□□□□ 0.63
CLCN1-201ENST00000343257 PDZRN3Q9UPQ7 1066 aa18.97■□□□□ 0.63
CLCN1-201ENST00000343257 PLEKHH2Q8IVE3 1493 aa18.96■□□□□ 0.63
CLCN1-201ENST00000343257 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
CLCN1-201ENST00000343257 PCDHB15Q9Y5E8 787 aa18.95■□□□□ 0.62
CLCN1-201ENST00000343257 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
CLCN1-201ENST00000343257 TBC1D32Q96NH3 1257 aa18.95■□□□□ 0.62
CLCN1-201ENST00000343257 CENPJQ9HC77 1338 aaPredicted RBP18.95■□□□□ 0.62
CLCN1-201ENST00000343257 CCDC144AA2RUR9 1427 aa18.95■□□□□ 0.62
CLCN1-201ENST00000343257 MYH16Q9H6N6 1097 aa18.95■□□□□ 0.62
CLCN1-201ENST00000343257 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
CLCN1-201ENST00000343257 ARHGEF12Q9NZN5 1544 aa18.94■□□□□ 0.62
CLCN1-201ENST00000343257 COL17A1Q9UMD9 1497 aaPredicted RBP18.94■□□□□ 0.62
CLCN1-201ENST00000343257 ERBB4Q15303 1308 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms