RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 GGT6Q6P531 493 aa10.59□□□□□ -0.71
PRDM2-203ENST00000343137 GOLGA6L3A6NEY3 463 aa10.59□□□□□ -0.71
PRDM2-203ENST00000343137 SYAP1Q96A49 352 aaPredicted RBP10.59□□□□□ -0.71
PRDM2-203ENST00000343137 EHBP1L1Q8N3D4 1523 aa10.58□□□□□ -0.72
PRDM2-203ENST00000343137 KIF3BO15066 747 aa10.58□□□□□ -0.72
PRDM2-203ENST00000343137 FGD1P98174 961 aa10.58□□□□□ -0.72
PRDM2-203ENST00000343137 HMMRO75330 724 aa10.58□□□□□ -0.72
PRDM2-203ENST00000343137 CFTRP13569 1480 aa10.58□□□□□ -0.72
PRDM2-203ENST00000343137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.58□□□□□ -0.72
PRDM2-203ENST00000343137 AAMPQ13685 434 aa10.57□□□□□ -0.72
PRDM2-203ENST00000343137 HDAC5Q9UQL6 1122 aa10.57□□□□□ -0.72
PRDM2-203ENST00000343137 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
PRDM2-203ENST00000343137 BRD4O60885 1362 aaPredicted RBP10.57□□□□□ -0.72
PRDM2-203ENST00000343137 KIAA1211Q6ZU35 1233 aa10.56□□□□□ -0.72
PRDM2-203ENST00000343137 KIF7Q2M1P5 1343 aa10.56□□□□□ -0.72
PRDM2-203ENST00000343137 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
PRDM2-203ENST00000343137 SLKQ9H2G2 1235 aaPredicted RBP10.56□□□□□ -0.72
PRDM2-203ENST00000343137 SPRYD3Q8NCJ5 442 aa10.56□□□□□ -0.72
PRDM2-203ENST00000343137 HMGXB3Q12766 1538 aa10.56□□□□□ -0.72
PRDM2-203ENST00000343137 PLCB2Q00722 1185 aa10.56□□□□□ -0.72
PRDM2-203ENST00000343137 STK26Q9P289 416 aa10.56□□□□□ -0.72
PRDM2-203ENST00000343137 PTPRGP23470 1445 aa10.55□□□□□ -0.72
PRDM2-203ENST00000343137 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
PRDM2-203ENST00000343137 SAFB2Q14151 953 aaKnown RBP eCLIP10.55□□□□□ -0.72
PRDM2-203ENST00000343137 CCDC146Q8IYE0 955 aa10.55□□□□□ -0.72
PRDM2-203ENST00000343137 MFAP1P55081 439 aaKnown RBP10.55□□□□□ -0.72
PRDM2-203ENST00000343137 EXOC6Q8TAG9 804 aa10.55□□□□□ -0.72
PRDM2-203ENST00000343137 HTATSF1O43719 755 aaKnown RBP10.55□□□□□ -0.72
PRDM2-203ENST00000343137 CSPP1Q1MSJ5 1256 aa10.54□□□□□ -0.72
PRDM2-203ENST00000343137 CRBNQ96SW2 442 aa10.54□□□□□ -0.72
PRDM2-203ENST00000343137 STK31Q9BXU1 1019 aa10.53□□□□□ -0.72
PRDM2-203ENST00000343137 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
PRDM2-203ENST00000343137 HFM1A2PYH4 1435 aa10.53□□□□□ -0.72
PRDM2-203ENST00000343137 ZKSCAN2Q63HK3 967 aa10.52□□□□□ -0.72
PRDM2-203ENST00000343137 SKOR2Q2VWA4 1001 aaPredicted RBP10.52□□□□□ -0.72
PRDM2-203ENST00000343137 ANKRD50Q9ULJ7 1429 aa10.52□□□□□ -0.73
PRDM2-203ENST00000343137 EVC2Q86UK5 1308 aa10.52□□□□□ -0.73
PRDM2-203ENST00000343137 GSE1Q14687 1217 aa10.51□□□□□ -0.73
PRDM2-203ENST00000343137 WASHC2AQ641Q2 1341 aa10.51□□□□□ -0.73
PRDM2-203ENST00000343137 WASHC2CQ9Y4E1 1318 aa10.51□□□□□ -0.73
PRDM2-203ENST00000343137 TPRNQ4KMQ1 711 aa10.51□□□□□ -0.73
PRDM2-203ENST00000343137 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
PRDM2-203ENST00000343137 ST18O60284 1047 aa10.51□□□□□ -0.73
PRDM2-203ENST00000343137 PRDM2Q13029 1718 aa10.51□□□□□ -0.73
PRDM2-203ENST00000343137 HECW1Q76N89 1606 aa10.51□□□□□ -0.73
PRDM2-203ENST00000343137 MAP3K1Q13233 1512 aa10.5□□□□□ -0.73
PRDM2-203ENST00000343137 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
PRDM2-203ENST00000343137 PHF14O94880 888 aa10.5□□□□□ -0.73
PRDM2-203ENST00000343137 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
PRDM2-203ENST00000343137 DRC7Q8IY82 874 aa10.49□□□□□ -0.73
PRDM2-203ENST00000343137 GZF1Q9H116 711 aaPredicted RBP10.49□□□□□ -0.73
PRDM2-203ENST00000343137 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
PRDM2-203ENST00000343137 CLUAP1Q96AJ1 413 aa10.49□□□□□ -0.73
PRDM2-203ENST00000343137 DDX19BQ9UMR2 479 aa10.48□□□□□ -0.73
PRDM2-203ENST00000343137 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
PRDM2-203ENST00000343137 LMOD2Q6P5Q4 547 aa10.48□□□□□ -0.73
PRDM2-203ENST00000343137 RSPH6AQ9H0K4 717 aa10.48□□□□□ -0.73
PRDM2-203ENST00000343137 A0A0G2JS52 829 aa10.48□□□□□ -0.73
PRDM2-203ENST00000343137 TRAK1Q9UPV9 953 aa10.47□□□□□ -0.73
PRDM2-203ENST00000343137 PLIN1O60240 522 aa10.47□□□□□ -0.73
PRDM2-203ENST00000343137 NAP1L2Q9ULW6 460 aaPredicted RBP10.47□□□□□ -0.73
PRDM2-203ENST00000343137 AQRO60306 1485 aaKnown RBP eCLIP10.46□□□□□ -0.73
PRDM2-203ENST00000343137 APBB1O00213 710 aa10.46□□□□□ -0.73
PRDM2-203ENST00000343137 RUNDC1Q96C34 613 aa10.46□□□□□ -0.73
PRDM2-203ENST00000343137 KIAA1107Q9UPP5 1409 aa10.46□□□□□ -0.73
PRDM2-203ENST00000343137 SCAPERQ9BY12 1400 aa10.46□□□□□ -0.74
PRDM2-203ENST00000343137 ROCK1Q13464 1354 aa10.46□□□□□ -0.74
PRDM2-203ENST00000343137 APAF1O14727 1248 aa10.46□□□□□ -0.74
PRDM2-203ENST00000343137 MLECQ14165 292 aa10.45□□□□□ -0.74
PRDM2-203ENST00000343137 SMG6Q86US8 1419 aaKnown RBP10.45□□□□□ -0.74
PRDM2-203ENST00000343137 SOX12O15370 315 aa10.45□□□□□ -0.74
PRDM2-203ENST00000343137 TPM4P67936 248 aa10.44□□□□□ -0.74
PRDM2-203ENST00000343137 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
PRDM2-203ENST00000343137 DZIP1LQ8IYY4 767 aaKnown RBP10.44□□□□□ -0.74
PRDM2-203ENST00000343137 COG6Q9Y2V7 657 aa10.44□□□□□ -0.74
PRDM2-203ENST00000343137 DNMBPQ6XZF7 1577 aa10.44□□□□□ -0.74
PRDM2-203ENST00000343137 PLEKHH2Q8IVE3 1493 aa10.44□□□□□ -0.74
PRDM2-203ENST00000343137 CHMP4CQ96CF2 233 aa10.43□□□□□ -0.74
PRDM2-203ENST00000343137 CHMP5Q9NZZ3 219 aa10.43□□□□□ -0.74
PRDM2-203ENST00000343137 RRP7AQ9Y3A4 280 aaKnown RBP10.43□□□□□ -0.74
PRDM2-203ENST00000343137 KIF16BQ96L93 1317 aa10.43□□□□□ -0.74
PRDM2-203ENST00000343137 API5Q9BZZ5 524 aaKnown RBP10.43□□□□□ -0.74
PRDM2-203ENST00000343137 WDR97A6NE52 1622 aa10.43□□□□□ -0.74
PRDM2-203ENST00000343137 NINLQ9Y2I6 1382 aa10.43□□□□□ -0.74
PRDM2-203ENST00000343137 ZNF644Q9H582 1327 aaPredicted RBP10.42□□□□□ -0.74
PRDM2-203ENST00000343137 SYNJ2O15056 1496 aa10.42□□□□□ -0.74
PRDM2-203ENST00000343137 KIF3AQ9Y496 699 aa10.42□□□□□ -0.74
PRDM2-203ENST00000343137 ATP6V1DQ9Y5K8 247 aa10.42□□□□□ -0.74
PRDM2-203ENST00000343137 EID1Q9Y6B2 187 aa10.42□□□□□ -0.74
PRDM2-203ENST00000343137 TOPBP1Q92547 1522 aa10.42□□□□□ -0.74
PRDM2-203ENST00000343137 CUL7Q14999 1698 aa10.41□□□□□ -0.74
PRDM2-203ENST00000343137 GNL2Q13823 731 aaKnown RBP10.41□□□□□ -0.74
PRDM2-203ENST00000343137 ANKRD45Q5TZF3 282 aa10.41□□□□□ -0.74
PRDM2-203ENST00000343137 COG3Q96JB2 828 aa10.41□□□□□ -0.74
PRDM2-203ENST00000343137 DIAPH1O60610 1272 aaKnown RBP10.41□□□□□ -0.74
PRDM2-203ENST00000343137 REC8O95072 547 aa10.41□□□□□ -0.74
PRDM2-203ENST00000343137 TROQ12816 1431 aaPredicted RBP10.4□□□□□ -0.74
PRDM2-203ENST00000343137 CCDC34Q96HJ3 373 aa10.4□□□□□ -0.74
PRDM2-203ENST00000343137 DAPK1P53355 1430 aa10.4□□□□□ -0.74
PRDM2-203ENST00000343137 SLC4A10Q6U841 1118 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms