RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 RAPGEF6Q8TEU7 1601 aa5.98□□□□□ -1.45
CCDC66-202ENST00000341455 MED1Q15648 1581 aaPredicted RBP5.98□□□□□ -1.45
CCDC66-202ENST00000341455 C3P01024 1663 aa5.97□□□□□ -1.45
CCDC66-202ENST00000341455 AKNAQ7Z591 1439 aa5.97□□□□□ -1.45
CCDC66-202ENST00000341455 POTEJP0CG39 1038 aa5.97□□□□□ -1.45
CCDC66-202ENST00000341455 POLR1AO95602 1720 aaPredicted RBP5.97□□□□□ -1.45
CCDC66-202ENST00000341455 SETD1BQ9UPS6 1966 aaKnown RBP5.96□□□□□ -1.45
CCDC66-202ENST00000341455 MS4A3Q96HJ5 214 aa5.96□□□□□ -1.45
CCDC66-202ENST00000341455 CNTLNQ9NXG0 1405 aa5.95□□□□□ -1.46
CCDC66-202ENST00000341455 KIF14Q15058 1648 aa5.95□□□□□ -1.46
CCDC66-202ENST00000341455 KDM5AP29375 1690 aaKnown RBP5.95□□□□□ -1.46
CCDC66-202ENST00000341455 NCOA1Q15788 1441 aa5.94□□□□□ -1.46
CCDC66-202ENST00000341455 C9orf84Q5VXU9 1444 aa5.94□□□□□ -1.46
CCDC66-202ENST00000341455 CERKQ8TCT0 537 aa5.94□□□□□ -1.46
CCDC66-202ENST00000341455 CARMIL1Q5VZK9 1371 aa5.94□□□□□ -1.46
CCDC66-202ENST00000341455 MYO5CQ9NQX4 1742 aa5.94□□□□□ -1.46
CCDC66-202ENST00000341455 PROM2Q8N271 834 aa5.93□□□□□ -1.46
CCDC66-202ENST00000341455 ITSN2Q9NZM3 1697 aa5.93□□□□□ -1.46
CCDC66-202ENST00000341455 TCOF1Q13428 1488 aaKnown RBP5.93□□□□□ -1.46
CCDC66-202ENST00000341455 TMEM121BQ9BXQ6 578 aaPredicted RBP5.93□□□□□ -1.46
CCDC66-202ENST00000341455 PLXNC1O60486 1568 aa5.93□□□□□ -1.46
CCDC66-202ENST00000341455 MYO3AQ8NEV4 1616 aa5.93□□□□□ -1.46
CCDC66-202ENST00000341455 RNF17Q9BXT8 1623 aaKnown RBP5.93□□□□□ -1.46
CCDC66-202ENST00000341455 KIF12Q96FN5 646 aa5.92□□□□□ -1.46
CCDC66-202ENST00000341455 DENND4BO75064 1496 aaPredicted RBP5.92□□□□□ -1.46
CCDC66-202ENST00000341455 DIP2CQ9Y2E4 1556 aa5.92□□□□□ -1.46
CCDC66-202ENST00000341455 HECW1Q76N89 1606 aa5.92□□□□□ -1.46
CCDC66-202ENST00000341455 SPDYE4A6NLX3 237 aa5.92□□□□□ -1.46
CCDC66-202ENST00000341455 CCDC61Q9Y6R9 512 aa5.92□□□□□ -1.46
CCDC66-202ENST00000341455 FAM163AQ96GL9 167 aaPredicted RBP5.91□□□□□ -1.46
CCDC66-202ENST00000341455 ATP10AO60312 1499 aa5.91□□□□□ -1.46
CCDC66-202ENST00000341455 SNPHO15079 494 aa5.91□□□□□ -1.46
CCDC66-202ENST00000341455 ATN1P54259 1190 aaPredicted RBP5.91□□□□□ -1.46
CCDC66-202ENST00000341455 MLH3Q9UHC1 1453 aa5.9□□□□□ -1.46
CCDC66-202ENST00000341455 CDAN1Q8IWY9 1227 aa5.9□□□□□ -1.46
CCDC66-202ENST00000341455 CAMSAP2Q08AD1 1489 aa5.9□□□□□ -1.47
CCDC66-202ENST00000341455 ALKQ9UM73 1620 aa5.89□□□□□ -1.47
CCDC66-202ENST00000341455 BMP2KQ9NSY1 1161 aaPredicted RBP5.89□□□□□ -1.47
CCDC66-202ENST00000341455 ATP10BO94823 1461 aa5.89□□□□□ -1.47
CCDC66-202ENST00000341455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCDC66-202ENST00000341455 MED14O60244 1454 aa5.88□□□□□ -1.47
CCDC66-202ENST00000341455 PRKCSHP14314 528 aaPredicted RBP5.88□□□□□ -1.47
CCDC66-202ENST00000341455 PREX2Q70Z35 1606 aa5.88□□□□□ -1.47
CCDC66-202ENST00000341455 ZC3H13Q5T200 1668 aaKnown RBP5.88□□□□□ -1.47
CCDC66-202ENST00000341455 ADGBQ8N7X0 1667 aa5.87□□□□□ -1.47
CCDC66-202ENST00000341455 ABCA6Q8N139 1617 aa5.87□□□□□ -1.47
CCDC66-202ENST00000341455 POTEFA5A3E0 1075 aa5.87□□□□□ -1.47
CCDC66-202ENST00000341455 UHRF1BP1Q6BDS2 1440 aa5.87□□□□□ -1.47
CCDC66-202ENST00000341455 MAP3K1Q13233 1512 aa5.87□□□□□ -1.47
CCDC66-202ENST00000341455 FKBP8Q14318 412 aa5.87□□□□□ -1.47
CCDC66-202ENST00000341455 VWDEQ8N2E2 1590 aa5.86□□□□□ -1.47
CCDC66-202ENST00000341455 INO80Q9ULG1 1556 aaPredicted RBP5.86□□□□□ -1.47
CCDC66-202ENST00000341455 LRRIQ1Q96JM4 1722 aa5.86□□□□□ -1.47
CCDC66-202ENST00000341455 NEURL4Q96JN8 1562 aa5.86□□□□□ -1.47
CCDC66-202ENST00000341455 CDK12Q9NYV4 1490 aaPredicted RBP5.85□□□□□ -1.47
CCDC66-202ENST00000341455 SUPT6HQ7KZ85 1726 aaKnown RBP5.85□□□□□ -1.47
CCDC66-202ENST00000341455 PLEKHG5O94827 1062 aa5.85□□□□□ -1.47
CCDC66-202ENST00000341455 ZNF518AQ6AHZ1 1483 aa5.85□□□□□ -1.47
CCDC66-202ENST00000341455 CEP170BQ9Y4F5 1589 aaPredicted RBP5.84□□□□□ -1.47
CCDC66-202ENST00000341455 ABCC1P33527 1531 aa5.84□□□□□ -1.47
CCDC66-202ENST00000341455 TRAPPC8Q9Y2L5 1435 aa5.84□□□□□ -1.47
CCDC66-202ENST00000341455 ARHGAP35Q9NRY4 1499 aa5.84□□□□□ -1.48
CCDC66-202ENST00000341455 CDK13Q14004 1512 aaKnown RBP5.83□□□□□ -1.48
CCDC66-202ENST00000341455 NUP153P49790 1475 aaKnown RBP5.83□□□□□ -1.48
CCDC66-202ENST00000341455 ILDR2Q71H61 639 aa5.83□□□□□ -1.48
CCDC66-202ENST00000341455 PLCH2O75038 1416 aa5.83□□□□□ -1.48
CCDC66-202ENST00000341455 FYCO1Q9BQS8 1478 aa5.83□□□□□ -1.48
CCDC66-202ENST00000341455 PTPRKQ15262 1439 aa5.82□□□□□ -1.48
CCDC66-202ENST00000341455 KIDINS220Q9ULH0 1771 aa5.82□□□□□ -1.48
CCDC66-202ENST00000341455 NWD1Q149M9 1564 aa5.82□□□□□ -1.48
CCDC66-202ENST00000341455 DISP3Q9P2K9 1392 aa5.82□□□□□ -1.48
CCDC66-202ENST00000341455 SETD1AO15047 1707 aaKnown RBP5.82□□□□□ -1.48
CCDC66-202ENST00000341455 LRP5O75197 1615 aa5.82□□□□□ -1.48
CCDC66-202ENST00000341455 MMRN1Q13201 1228 aa5.81□□□□□ -1.48
CCDC66-202ENST00000341455 LRRC9Q6ZRR7 1453 aa5.81□□□□□ -1.48
CCDC66-202ENST00000341455 SEC24BO95487 1268 aa5.81□□□□□ -1.48
CCDC66-202ENST00000341455 PLCB2Q00722 1185 aa5.81□□□□□ -1.48
CCDC66-202ENST00000341455 ZBTB47Q9UFB7 747 aaPredicted RBP5.81□□□□□ -1.48
CCDC66-202ENST00000341455 CAMSAP1Q5T5Y3 1602 aa5.81□□□□□ -1.48
CCDC66-202ENST00000341455 TTLL13PA6NNM8 815 aa5.8□□□□□ -1.48
CCDC66-202ENST00000341455 A2ML1A8K2U0 1454 aa5.8□□□□□ -1.48
CCDC66-202ENST00000341455 LAMC1P11047 1609 aa5.8□□□□□ -1.48
CCDC66-202ENST00000341455 SPNS2Q8IVW8 549 aa5.8□□□□□ -1.48
CCDC66-202ENST00000341455 EIF2AK4Q9P2K8 1649 aaKnown RBP5.8□□□□□ -1.48
CCDC66-202ENST00000341455 CDC42BPBQ9Y5S2 1711 aa5.8□□□□□ -1.48
CCDC66-202ENST00000341455 DNMT1P26358 1616 aaKnown RBP5.8□□□□□ -1.48
CCDC66-202ENST00000341455 CCDC18Q5T9S5 1454 aa5.8□□□□□ -1.48
CCDC66-202ENST00000341455 KDM5DQ9BY66 1539 aa5.8□□□□□ -1.48
CCDC66-202ENST00000341455 CASKIN1Q8WXD9 1431 aa5.8□□□□□ -1.48
CCDC66-202ENST00000341455 SHPRHQ149N8 1683 aa5.79□□□□□ -1.48
CCDC66-202ENST00000341455 ABCC3O15438 1527 aa5.79□□□□□ -1.48
CCDC66-202ENST00000341455 FMN1Q68DA7 1419 aa5.79□□□□□ -1.48
CCDC66-202ENST00000341455 TAOK2Q9UL54 1235 aa5.79□□□□□ -1.48
CCDC66-202ENST00000341455 XIRP1Q702N8 1843 aaKnown RBP5.79□□□□□ -1.48
CCDC66-202ENST00000341455 BCANQ96GW7 911 aa5.79□□□□□ -1.48
CCDC66-202ENST00000341455 IQGAP1P46940 1657 aa5.78□□□□□ -1.48
CCDC66-202ENST00000341455 ST18O60284 1047 aa5.78□□□□□ -1.48
CCDC66-202ENST00000341455 PKD2Q13563 968 aa5.78□□□□□ -1.48
CCDC66-202ENST00000341455 ATP7AQ04656 1500 aa5.77□□□□□ -1.49
CCDC66-202ENST00000341455 PLEKHH2Q8IVE3 1493 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms