RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 KCNC4Q03721 635 aa4.35□□□□□ -1.71
CCDC30-201ENST00000340612 NRG2O14511 850 aaPredicted RBP4.35□□□□□ -1.71
CCDC30-201ENST00000340612 P3H3Q8IVL6 736 aa4.34□□□□□ -1.71
CCDC30-201ENST00000340612 WBP1LQ9NX94 342 aa4.34□□□□□ -1.71
CCDC30-201ENST00000340612 PTPREP23469 700 aa4.34□□□□□ -1.72
CCDC30-201ENST00000340612 FOXK1P85037 733 aa4.34□□□□□ -1.72
CCDC30-201ENST00000340612 DSG2Q14126 1118 aa4.34□□□□□ -1.72
CCDC30-201ENST00000340612 NCKAP5LQ9HCH0 1330 aa4.33□□□□□ -1.72
CCDC30-201ENST00000340612 PRKD2Q9BZL6 878 aa4.33□□□□□ -1.72
CCDC30-201ENST00000340612 NBPF3Q9H094 633 aa4.33□□□□□ -1.72
CCDC30-201ENST00000340612 ANKK1Q8NFD2 765 aa4.33□□□□□ -1.72
CCDC30-201ENST00000340612 UPF1Q92900 1129 aaKnown RBP eCLIP4.33□□□□□ -1.72
CCDC30-201ENST00000340612 POTECB2RU33 542 aa4.32□□□□□ -1.72
CCDC30-201ENST00000340612 TBC1D12O60347 775 aa4.32□□□□□ -1.72
CCDC30-201ENST00000340612 FOSBP53539 338 aa4.32□□□□□ -1.72
CCDC30-201ENST00000340612 PROX2Q3B8N5 592 aa4.32□□□□□ -1.72
CCDC30-201ENST00000340612 LARP6Q9BRS8 491 aaKnown RBP4.32□□□□□ -1.72
CCDC30-201ENST00000340612 ADAM33Q9BZ11 813 aa4.32□□□□□ -1.72
CCDC30-201ENST00000340612 SOWAHBA6NEL2 793 aa4.31□□□□□ -1.72
CCDC30-201ENST00000340612 E2F4Q16254 413 aa4.31□□□□□ -1.72
CCDC30-201ENST00000340612 LMOD2Q6P5Q4 547 aa4.3□□□□□ -1.72
CCDC30-201ENST00000340612 SEMA3EO15041 775 aa4.3□□□□□ -1.72
CCDC30-201ENST00000340612 OXER1Q8TDS5 423 aa4.29□□□□□ -1.72
CCDC30-201ENST00000340612 GPHNQ9NQX3 736 aaPredicted RBP4.29□□□□□ -1.72
CCDC30-201ENST00000340612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC30-201ENST00000340612 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
CCDC30-201ENST00000340612 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
CCDC30-201ENST00000340612 CRISPLD2Q9H0B8 497 aa4.28□□□□□ -1.72
CCDC30-201ENST00000340612 PDZRN3Q9UPQ7 1066 aa4.28□□□□□ -1.72
CCDC30-201ENST00000340612 ZFRQ96KR1 1074 aaKnown RBP4.28□□□□□ -1.72
CCDC30-201ENST00000340612 PDE4AP27815 886 aa4.28□□□□□ -1.73
CCDC30-201ENST00000340612 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.73
CCDC30-201ENST00000340612 ARHGEF1Q92888 912 aaKnown RBP4.28□□□□□ -1.73
CCDC30-201ENST00000340612 DDX27Q96GQ7 796 aaKnown RBP4.28□□□□□ -1.73
CCDC30-201ENST00000340612 RABGEF1Q9UJ41 708 aa4.28□□□□□ -1.73
CCDC30-201ENST00000340612 COL9A1P20849 921 aa4.27□□□□□ -1.73
CCDC30-201ENST00000340612 ZDHHC16Q969W1 377 aa4.27□□□□□ -1.73
CCDC30-201ENST00000340612 SEPT9Q9UHD8 586 aaPredicted RBP4.27□□□□□ -1.73
CCDC30-201ENST00000340612 MFSD10Q14728 455 aa4.26□□□□□ -1.73
CCDC30-201ENST00000340612 PPP1R18Q6NYC8 613 aa4.26□□□□□ -1.73
CCDC30-201ENST00000340612 NYAP1Q6ZVC0 841 aa4.26□□□□□ -1.73
CCDC30-201ENST00000340612 TESPA1A2RU30 521 aaPredicted RBP4.25□□□□□ -1.73
CCDC30-201ENST00000340612 JPH4Q96JJ6 628 aa4.25□□□□□ -1.73
CCDC30-201ENST00000340612 KIAA1468Q9P260 1216 aa4.25□□□□□ -1.73
CCDC30-201ENST00000340612 SOCS7O14512 581 aa4.24□□□□□ -1.73
CCDC30-201ENST00000340612 PPP1R15BQ5SWA1 713 aa4.24□□□□□ -1.73
CCDC30-201ENST00000340612 TREML4Q6UXN2 200 aa4.24□□□□□ -1.73
CCDC30-201ENST00000340612 HPS5Q9UPZ3 1129 aa4.24□□□□□ -1.73
CCDC30-201ENST00000340612 V9GY48 417 aaPredicted RBP4.24□□□□□ -1.73
CCDC30-201ENST00000340612 PPP1R3GB7ZBB8 358 aa4.24□□□□□ -1.73
CCDC30-201ENST00000340612 TJAP1Q5JTD0 557 aa4.24□□□□□ -1.73
CCDC30-201ENST00000340612 ZC3H15Q8WU90 426 aaKnown RBP4.24□□□□□ -1.73
CCDC30-201ENST00000340612 MLLT3P42568 568 aaPredicted RBP4.23□□□□□ -1.73
CCDC30-201ENST00000340612 ANO8Q9HCE9 1232 aaPredicted RBP4.23□□□□□ -1.73
CCDC30-201ENST00000340612 DPYSL4O14531 572 aa4.23□□□□□ -1.73
CCDC30-201ENST00000340612 TULP1O00294 542 aaPredicted RBP4.22□□□□□ -1.73
CCDC30-201ENST00000340612 MYT1Q01538 1121 aa4.22□□□□□ -1.73
CCDC30-201ENST00000340612 CAMK2BQ13554 666 aa4.22□□□□□ -1.73
CCDC30-201ENST00000340612 LAPTM4BQ86VI4 370 aa4.22□□□□□ -1.73
CCDC30-201ENST00000340612 EMILIN3Q9NT22 766 aa4.22□□□□□ -1.73
CCDC30-201ENST00000340612 TSR3Q9UJK0 312 aaKnown RBP4.22□□□□□ -1.73
CCDC30-201ENST00000340612 EVI5O60447 810 aa4.22□□□□□ -1.73
CCDC30-201ENST00000340612 TRIM67Q6ZTA4 783 aa4.21□□□□□ -1.73
CCDC30-201ENST00000340612 ZNF516Q92618 1163 aa4.21□□□□□ -1.73
CCDC30-201ENST00000340612 SLC24A3Q9HC58 644 aa4.21□□□□□ -1.73
CCDC30-201ENST00000340612 RBM26Q5T8P6 1007 aaKnown RBP4.21□□□□□ -1.74
CCDC30-201ENST00000340612 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.21□□□□□ -1.74
CCDC30-201ENST00000340612 PCDHGA10Q9Y5H3 936 aa4.2□□□□□ -1.74
CCDC30-201ENST00000340612 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.2□□□□□ -1.74
CCDC30-201ENST00000340612 NKX2-3Q8TAU0 364 aa4.19□□□□□ -1.74
CCDC30-201ENST00000340612 LRCH3Q96II8 777 aa4.19□□□□□ -1.74
CCDC30-201ENST00000340612 MTRQ99707 1265 aa4.19□□□□□ -1.74
CCDC30-201ENST00000340612 BRPF1P55201 1214 aaPredicted RBP4.19□□□□□ -1.74
CCDC30-201ENST00000340612 ARIH1Q9Y4X5 557 aaPredicted RBP4.19□□□□□ -1.74
CCDC30-201ENST00000340612 PKDCCQ504Y2 493 aa4.18□□□□□ -1.74
CCDC30-201ENST00000340612 FAM98CQ17RN3 349 aaKnown RBP4.18□□□□□ -1.74
CCDC30-201ENST00000340612 ST8SIA5O15466 376 aa4.17□□□□□ -1.74
CCDC30-201ENST00000340612 ZMYND10O75800 440 aa4.17□□□□□ -1.74
CCDC30-201ENST00000340612 SMYD5Q6GMV2 418 aa4.17□□□□□ -1.74
CCDC30-201ENST00000340612 NEUROD2Q15784 382 aa4.17□□□□□ -1.74
CCDC30-201ENST00000340612 STK17AQ9UEE5 414 aa4.17□□□□□ -1.74
CCDC30-201ENST00000340612 PPP4CP60510 307 aa4.16□□□□□ -1.74
CCDC30-201ENST00000340612 PDIA6Q15084 440 aa4.16□□□□□ -1.74
CCDC30-201ENST00000340612 GPIHBP1Q8IV16 184 aa4.16□□□□□ -1.74
CCDC30-201ENST00000340612 EMID1Q96A84 441 aaPredicted RBP4.16□□□□□ -1.74
CCDC30-201ENST00000340612 TIMELESSQ9UNS1 1208 aa4.16□□□□□ -1.74
CCDC30-201ENST00000340612 GRXCR2A6NFK2 248 aa4.16□□□□□ -1.74
CCDC30-201ENST00000340612 IL21Q9HBE4 155 aa4.16□□□□□ -1.74
CCDC30-201ENST00000340612 GTF3C3Q9Y5Q9 886 aa4.16□□□□□ -1.74
CCDC30-201ENST00000340612 TRIM6-TRIM34B2RNG4 842 aa4.15□□□□□ -1.75
CCDC30-201ENST00000340612 WFS1O76024 890 aa4.15□□□□□ -1.75
CCDC30-201ENST00000340612 MAP3K9P80192 1104 aa4.14□□□□□ -1.75
CCDC30-201ENST00000340612 TMEM132AQ24JP5 1023 aa4.14□□□□□ -1.75
CCDC30-201ENST00000340612 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
CCDC30-201ENST00000340612 GPBP1L1Q9HC44 474 aaPredicted RBP4.14□□□□□ -1.75
CCDC30-201ENST00000340612 DGAT1O75907 488 aa4.14□□□□□ -1.75
CCDC30-201ENST00000340612 BARGINQ6ZT62 677 aa4.14□□□□□ -1.75
CCDC30-201ENST00000340612 DDX12PQ92771 950 aa4.14□□□□□ -1.75
CCDC30-201ENST00000340612 DACH1Q9UI36 760 aa4.13□□□□□ -1.75
CCDC30-201ENST00000340612 FAM187AA6NFU0 413 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms